◆◆◆RE_0858 detail◆◆◆

Code name	RE_0858
Locus	AT3G04030
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0858_1164bp ATGTATTACCAAAACCAGCACCAAGGAAAGAACATCCTCTCATCTTCAAGAATGCATATAACTTCTGAAAGGCATCCATTCCTTAGAGGGAATAGTCCAG GTGATTCTGGACTTATCCTATCAACCGATGCAAAGCCACGCCTAAAATGGACTCCAGATCTTCATGAGAGATTCATTGAAGCAGTCAATCAACTCGGTGG AGCAGATAAAGCTACTCCTAAGACAATCATGAAAGTCATGGGGATTCCAGGCCTTACCTTATACCATCTCAAAAGTCATCTTCAGAAATACAGGCTGAGC AAGAATCTCAACGGACAAGCTAACAACAGCTTCAACAAAATAGGTATAATGACCATGATGGAAGAAAAGACTCCTGATGCAGACGAAATTCAAAGCGAGA ATTTAAGCATTGGACCACAGCCAAACAAGAATTCACCAATAGGTGAAGCACTGCAAATGCAAATAGAGGTCCAAAGAAGGCTTCATGAGCAACTTGAGCT TAGGATAGAGGCTCAAGGGAAGTACCTGCAATCGGTTTTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTCGGTGCAGCTGGGATCGAAGCTGCC AAAGTTCAACTCTCGGAACTAGTATCTAAAGTATCAGCAGAGTACCCAAACTCTAGTTTCCTAGAACCAAAAGAACTTCAAAACCTATGCTCACAACAGA TGCAAACAAACTATCCACCTGATTGCTCTCCTGAAAGTTGCCTGACCTCAAGCGAGGGAACGCAGAAAAACTCGAAAATGCTAGAGAACAACAGATTAGG ACTAAGAACGTATATTGGTGATTCAACATCGGAGCAGAAAGAGATTATGGAAGAACCATTGTTCCAAAGAATGGAGCTCACATGGACAGAAGGTCTAAGA GGGAATCCATATCTTTCAACAATGGTGAGTGAAGCAGAACAAAGAATCTCATATTCAGAAAGAAGTCCAGGTAGATTATCAATAGGAGTAGGATTGCACG GACACAAAAGCCAACATCAACAAGGCAACAATGAGGATCATAAGCTTGAAACACGAAACCGGAAAGGCATGGATTCAACAACAGAGCTAGATCTCAACAC ACATGTTGAAAACTATTGTACAACGCGTACGAAACAGTTCGACTTGAATGGTTTCAGCTGGAAC >RE_0858_translated MYYQNQHQGKNILSSSRMHITSERHPFLRGNSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLS KNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLELRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSPESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRMELTWTEGLR GNPYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQQGNNEDHKLETRNRKGMDSTTELDLNTHVENYCTTRTKQFDLNGFSWN
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1163/1164 (99.9%)（アミノ酸配列で387/388 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G04 ATGTATTACCAAAACCAGCACCAAGGAAAGAACATCCTCTCATCTTCAAGAATGCATATAACTTCTGAAAGGCATCCATTCCTTAGAGGGAATAGTCCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ATGTATTACCAAAACCAGCACCAAGGAAAGAACATCCTCTCATCTTCAAGAATGCATATAACTTCTGAAAGGCATCCATTCCTTAGAGGGAATAGTCCAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G04 GTGATTCTGGACTTATCCTATCAACCGATGCAAAGCCACGCCTAAAATGGACTCCAGATCTTCATGAGAGATTCATTGAAGCAGTCAATCAACTCGGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 GTGATTCTGGACTTATCCTATCAACCGATGCAAAGCCACGCCTAAAATGGACTCCAGATCTTCATGAGAGATTCATTGAAGCAGTCAATCAACTCGGTGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G04 AGCAGATAAAGCTACTCCTAAGACAATCATGAAAGTCATGGGGATTCCAGGCCTTACCTTATACCATCTCAAAAGTCATCTTCAGAAATACAGGCTGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 AGCAGATAAAGCTACTCCTAAGACAATCATGAAAGTCATGGGGATTCCAGGCCTTACCTTATACCATCTCAAAAGTCATCTTCAGAAATACAGGCTGAGC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G04 AAGAATCTCAACGGACAAGCTAACAACAGCTTCAACAAAATAGGTATAATGACCATGATGGAAGAAAAGACTCCTGATGCAGACGAAATTCAAAGCGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 AAGAATCTCAACGGACAAGCTAACAACAGCTTCAACAAAATAGGTATAATGACCATGATGGAAGAAAAGACTCCTGATGCAGACGAAATTCAAAGCGAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G04 ATTTAAGCATTGGACCACAGCCAAACAAGAATTCACCAATAGGTGAAGCACTGCAAATGCAAATAGAGGTCCAAAGAAGGCTTCATGAGCAACTTGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ATTTAAGCATTGGACCACAGCCAAACAAGAATTCACCAATAGGTGAAGCACTGCAAATGCAAATAGAGGTCCAAAGAAGGCTTCATGAGCAACTTGAGCT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G04 TAGGATAGAGGCTCAAGGGAAGTACCTGCAATCGGTTTTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTCGGTGCAGCTGGGATCGAAGCTGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TAGGATAGAGGCTCAAGGGAAGTACCTGCAATCGGTTTTGGAGAAAGCACAAGAGACTCTTGGAAGACAGAACCTCGGTGCAGCTGGGATCGAAGCTGCC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G04 AAAGTTCAACTCTCGGAACTAGTATCTAAAGTATCAGCAGAGTACCCAAACTCTAGTTTCCTAGAACCAAAAGAACTTCAAAACCTATGCTCACAACAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 AAAGTTCAACTCTCGGAACTAGTATCTAAAGTATCAGCAGAGTACCCAAACTCTAGTTTCCTAGAACCAAAAGAACTTCAAAACCTATGCTCACAACAGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G04 TGCAAACAAACTATCCACCTGATTGCTCTCTTGAAAGTTGCCTGACCTCAAGCGAGGGAACGCAGAAAAACTCGAAAATGCTAGAGAACAACAGATTAGG :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGCAAACAAACTATCCACCTGATTGCTCTCCTGAAAGTTGCCTGACCTCAAGCGAGGGAACGCAGAAAAACTCGAAAATGCTAGAGAACAACAGATTAGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G04 ACTAAGAACGTATATTGGTGATTCAACATCGGAGCAGAAAGAGATTATGGAAGAACCATTGTTCCAAAGAATGGAGCTCACATGGACAGAAGGTCTAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ACTAAGAACGTATATTGGTGATTCAACATCGGAGCAGAAAGAGATTATGGAAGAACCATTGTTCCAAAGAATGGAGCTCACATGGACAGAAGGTCTAAGA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G04 GGGAATCCATATCTTTCAACAATGGTGAGTGAAGCAGAACAAAGAATCTCATATTCAGAAAGAAGTCCAGGTAGATTATCAATAGGAGTAGGATTGCACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 GGGAATCCATATCTTTCAACAATGGTGAGTGAAGCAGAACAAAGAATCTCATATTCAGAAAGAAGTCCAGGTAGATTATCAATAGGAGTAGGATTGCACG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G04 GACACAAAAGCCAACATCAACAAGGCAACAATGAGGATCATAAGCTTGAAACACGAAACCGGAAAGGCATGGATTCAACAACAGAGCTAGATCTCAACAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 GACACAAAAGCCAACATCAACAAGGCAACAATGAGGATCATAAGCTTGAAACACGAAACCGGAAAGGCATGGATTCAACAACAGAGCTAGATCTCAACAC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 AT3G04 ACATGTTGAAAACTATTGTACAACGCGTACGAAACAGTTCGACTTGAATGGTTTCAGCTGGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ACATGTTGAAAACTATTGTACAACGCGTACGAAACAGTTCGACTTGAATGGTTTCAGCTGGAAC 1110 1120 1130 1140 1150 1160 10 20 30 40 50 60 70 80 90 100 AT3G04 MYYQNQHQGKNILSSSRMHITSERHPFLRGNSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 MYYQNQHQGKNILSSSRMHITSERHPFLRGNSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G04 KNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLELRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 KNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLELRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G04 KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRMELTWTEGLR ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSPESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRMELTWTEGLR 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT3G04 GNPYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQQGNNEDHKLETRNRKGMDSTTELDLNTHVENYCTTRTKQFDLNGFSWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 GNPYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQQGNNEDHKLETRNRKGMDSTTELDLNTHVENYCTTRTKQFDLNGFSWN 310 320 330 340 350 360 370 380

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