◆◆◆RE_0874 detail◆◆◆

Code name	RE_0874
Locus	AT4G37180
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列96.30%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0874_1029bp ATGGTTCAAACAGAAACCGATCAAAGGATGGGTCTTAATCTGAATTTGTCTATCTACTCTTTACCAAAACCCTTATCTCAATTTCTCGATGAAGTGTCGA GGATCAAAGACAATCATTCCAAACTGTCTGAAATCGATGGTTATGTCGGAAAATTAGAGGAAGAAAGGAACAAAATCGATGTTTTTAAACGAGAACTCCC TTTATGCATGCTCTTATTGAACGAAGCGATTGGGGCGTTGAAGGATGAGGCTAGAAAAGGGTTATCACTGATGGCATCTAATGGGAAATTCGATGATGTT GAAAGGGCAAAACCGGAAACTGATAAGAAGAGCTGGATGAGCTCTGCCCAGTTATGGATCTCGAACCCTAATTCCCAATTCCGATCGACAAACGAAGAAG AAGAAGATCGGTGTGTGAGTCAGAACCCATTTCAGACATGTAATTACCCTAATCAAGGAGGGGTATTTATGCCATTTAACCGTCCCCCACCTCCTCCACC ACCAGCTCCTCTGTCTCTCATGACTCCAACATCAGAGATGATGATGGATTATAGCAGAATTGAGCAGAGTCATCATCATCATCAATTCAATAAACCTTCT TCACAGAGTCATCACATTCAGAAGAAAGAGCAGAGAAGGAGATGGTCACAGGAACTTCACCGTAAATTTGTTGATGCTCTTCATAGGCTTGGAGGGCCAC AAGTTGCTACACCAAAGCAGATTAGAGATTTGATGAAAGTTGATGGTTTAACCAATGATGAAGTCAAGAGCCATTTACAAAAATATAGAATGCATATCCG TAAGCATCCGCTGCATCCGACAAAGACTTTGTCATCGTCGGATCAGCCAGGTGTGTTAGAGAGAGAATCGCAGAGCTTAATAAGTTTGTCGAGGTCGGAT TCGCCACAAAGCCCACTTGTTGCAAGAGGGTTGTTCAGTAGTAATGTTGGTCATAGCTCAGAGGAAGATGAGGAGGAGGAGGATGAAGAGGAGGAGAAGT CTGATGGACGTAGTAGCTGTAGAAATGAT >RE_0874_translated MVQTETDQRMGLNLNLSIYSLPKPLSQFLDEVSRIKDNHSKLSEIDGYVGKLEEERNKIDVFKRELPLCMLLLNEAIGALKDEARKGLSLMASNGKFDDV ERAKPETDKKSWMSSAQLWISNPNSQFRSTNEEEEDRCVSQNPFQTCNYPNQGGVFMPFNRPPPPPPPAPLSLMTPTSEMMMDYSRIEQSHHHHQFNKPS SQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKHPLHPTKTLSSSDQPGVLERESQSLISLSRSD SPQSPLVARGLFSSNVGHSSEEDEEEEDEEEEKSDGRSSCRND
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1028/1068 (96.3%)（アミノ酸配列で343/356 (96.3%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G37 ATGGTTCAAACAGAAACCGATCAAAGGATGGGTCTTAATCTGAATTTGTCTATCTACTCTTTACCAAAACCCTTATCTCAATTTCTCGATGAAGTGTCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 ATGGTTCAAACAGAAACCGATCAAAGGATGGGTCTTAATCTGAATTTGTCTATCTACTCTTTACCAAAACCCTTATCTCAATTTCTCGATGAAGTGTCGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G37 GGATCAAAGACAATCATTCCAAACTGTCTGAAATCGATGGTTATGTCGGAAAATTAGAGGAAGAAAGGAACAAAATCGATGTTTTTAAACGAGAACTCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 GGATCAAAGACAATCATTCCAAACTGTCTGAAATCGATGGTTATGTCGGAAAATTAGAGGAAGAAAGGAACAAAATCGATGTTTTTAAACGAGAACTCCC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G37 TTTATGCATGCTCTTATTGAACGAAGCGATTGGGGCGTTGAAGGATGAGGCTAGAAAAGGGTTATCACTGATGGCATCTAATGGGAAATTCGATGATGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 TTTATGCATGCTCTTATTGAACGAAGCGATTGGGGCGTTGAAGGATGAGGCTAGAAAAGGGTTATCACTGATGGCATCTAATGGGAAATTCGATGATGTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G37 GAAAGGGCAAAACCGGAAACTGATAAGAAGAGCTGGATGAGCTCTGCCCAGTTATGGATCTCGAACCCTAATTCCCAATTCCGATCGACAAATGAAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: RE_087 GAAAGGGCAAAACCGGAAACTGATAAGAAGAGCTGGATGAGCTCTGCCCAGTTATGGATCTCGAACCCTAATTCCCAATTCCGATCGACAAACGAAGAAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G37 AAGAAGATCGGTGTGTGAGTCAGAACCCATTTCAGACATGTAATTACCCTAATCAAGGAGGGGTATTTATGCCATTTAACCGTCCCCCACCTCCTCCACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 AAGAAGATCGGTGTGTGAGTCAGAACCCATTTCAGACATGTAATTACCCTAATCAAGGAGGGGTATTTATGCCATTTAACCGTCCCCCACCTCCTCCACC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G37 ACCAGCTCCTCTGTCTCTCATGACTCCAACATCAGAGATGATGATGGATTATAGCAGAATTGAGCAGAGTCATCATCATCATCAATTCAATAAACCTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 ACCAGCTCCTCTGTCTCTCATGACTCCAACATCAGAGATGATGATGGATTATAGCAGAATTGAGCAGAGTCATCATCATCATCAATTCAATAAACCTTCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G37 TCACAGAGTCATCACATTCAGAAGAAAGAGCAGAGAAGGAGATGGTCACAGGAACTTCACCGTAAATTTGTTGATGCTCTTCATAGGCTTGGAGGGCCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 TCACAGAGTCATCACATTCAGAAGAAAGAGCAGAGAAGGAGATGGTCACAGGAACTTCACCGTAAATTTGTTGATGCTCTTCATAGGCTTGGAGGGCCAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G37 AAGTTGCTACACCAAAGCAGATTAGAGATTTGATGAAAGTTGATGGTTTAACCAATGATGAAGTCAAGAGCCATTTACAAAAATATAGAATGCATATCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 AAGTTGCTACACCAAAGCAGATTAGAGATTTGATGAAAGTTGATGGTTTAACCAATGATGAAGTCAAGAGCCATTTACAAAAATATAGAATGCATATCCG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G37 TAAGCATCCGCTGCATCCGACAAAGACTTTGTCATCGTCGGATCAGCCAGGTGTGTTAGAGAGAGAATCGCAGAGCTTAATAAGTTTGTCGAGGTCGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 TAAGCATCCGCTGCATCCGACAAAGACTTTGTCATCGTCGGATCAGCCAGGTGTGTTAGAGAGAGAATCGCAGAGCTTAATAAGTTTGTCGAGGTCGGAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G37 TCGCCACAAAGCCCACTTGTTGCAAGAGGGTTGTTCAGTAGTAATGTTGGTCATAGCTCAGAGGAAGATGAGGAGGAGGAGGATGAAGAGGAGGAGAAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 TCGCCACAAAGCCCACTTGTTGCAAGAGGGTTGTTCAGTAGTAATGTTGGTCATAGCTCAGAGGAAGATGAGGAGGAGGAGGATGAAGAGGAGGAGAAGT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 AT4G37 CTGATGGACGTAGTAGCTGTAGAAATGATGAAACAAAGAAGAAGAGACAAGTGTTGGATCTTGAGCTT ::::::::::::::::::::::::::::: RE_087 CTGATGGACGTAGTAGCTGTAGAAATGAT--------------------------------------- 1010 1020 10 20 30 40 50 60 70 80 90 100 AT4G37 MVQTETDQRMGLNLNLSIYSLPKPLSQFLDEVSRIKDNHSKLSEIDGYVGKLEEERNKIDVFKRELPLCMLLLNEAIGALKDEARKGLSLMASNGKFDDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 MVQTETDQRMGLNLNLSIYSLPKPLSQFLDEVSRIKDNHSKLSEIDGYVGKLEEERNKIDVFKRELPLCMLLLNEAIGALKDEARKGLSLMASNGKFDDV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G37 ERAKPETDKKSWMSSAQLWISNPNSQFRSTNEEEEDRCVSQNPFQTCNYPNQGGVFMPFNRPPPPPPPAPLSLMTPTSEMMMDYSRIEQSHHHHQFNKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 ERAKPETDKKSWMSSAQLWISNPNSQFRSTNEEEEDRCVSQNPFQTCNYPNQGGVFMPFNRPPPPPPPAPLSLMTPTSEMMMDYSRIEQSHHHHQFNKPS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G37 SQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKHPLHPTKTLSSSDQPGVLERESQSLISLSRSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_087 SQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKHPLHPTKTLSSSDQPGVLERESQSLISLSRSD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT4G37 SPQSPLVARGLFSSNVGHSSEEDEEEEDEEEEKSDGRSSCRNDETKKKRQVLDLEL ::::::::::::::::::::::::::::::::::::::::::: RE_087 SPQSPLVARGLFSSNVGHSSEEDEEEEDEEEEKSDGRSSCRND------------- 310 320 330 340

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