◆◆◆RE_0883 detail◆◆◆

Code name	RE_0883
Locus	AT5G44190
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0420_アミノ酸配列70%以上一致
sequence	>RE_0883_1158bp ATGTTAACTGTTTCTCCGGCTCCAGTACTCATCGGAAACAACTCAAAGGATACTTACATGGCGGCAGATTTCGCAGATTTTACGACGGAAGACTTGCCGG ACTTTACGACGGTCGGGGATTTTTCCGATGATCTTCTTGATGGAATCGATTACTACGACGATCTTTTCATTGGTTTCGATGGAGACGATGTTTTGCCGGA TTTGGAGATAGATTCGGAGATTCTTGGGGAATATTCCGGTAGCGGAAGAGATGAGGAACAAGAAATGGAGGGTAACACTTCGACGGCATCGGAGACATCG GAGAGAGACGTTGGTGTGTGTAAGCAAGAGGGTGGTGGTGGTGGTGACGGTGGTTTTAGGGACAAAACGGTGCGTCGAGGCAAACGTAAAGGGAAGAAAA GTAAAGATTGTTTATCCGATGAGAACGATATTAAGAAAAAACCTAAGGTGGATTGGACGCCGGAGTTACACCGGACATTTGTACAAGCGGTGGAGCAATT AGGGGTAGACAAGGCGGTGCCGTCTCGAATCTTGGAAATTATGAACGTTAAATCTCTCACTCGTCACAACGTTGCTAGCCATCTTCAGAAATATAGGTCA CATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAATCTCCGGAGACATGCCACGGTGGCAGTGCCCGGAGTAGGAGGAGGAGGGAAGA AGCCGTGGACAGCTCCTGCCTTAGGCTATCCTCCACACGTGGCACCAATGCATCATGGTCACTTCAGGCCTTTGCACGTATGGGGTCATCCTACGTGGCC AAAACACAAGCCTAATACTCCGGCGTCTGCTCATCGGACGTATCCAATGCCGGCCATTGCGGCGGCTCCGGCATCTTGGCCAGGTCATCCACCGTACTGG CATCAGCAACCACTCTATCCACAGGGATATGGTATGGCATCATCGAATCATTCAAGCATCGGTGTTCCCACAAGACAATTAGGACCCACTAATCCTCCCA TCGACATTCATCCCTCGAATGAGAGCATAGATGCAGCTATTGGGGACGTTATATCAAAGCCGTGGCTGCCGCTTCCTTTGGGACTGAAACCGCCGTCGGT TGACGGTGTTATGACGGAGTTACAACGTCAAGGAGTTTCTAATGTTCCTCCTCTTCCT >RE_0883_translated MLTVSPAPVLIGNNSKDTYMAADFADFTTEDLPDFTTVGDFSDDLLDGIDYYDDLFIGFDGDDVLPDLEIDSEILGEYSGSGRDEEQEMEGNTSTASETS ERDVGVCKQEGGGGGDGGFRDKTVRRGKRKGKKSKDCLSDENDIKKKPKVDWTPELHRTFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS HRKHLLAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLHVWGHPTWPKHKPNTPASAHRTYPMPAIAAAPASWPGHPPYW HQQPLYPQGYGMASSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVISKPWLPLPLGLKPPSVDGVMTELQRQGVSNVPPLP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1157/1158 (99.9%)（アミノ酸配列で385/386 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G44 ATGTTAACTGTTTCTCCGGCTCCAGTACTCATCGGAAACAACTCAAAGGATACTTACATGGCGGCAGATTTCGCAGATTTTACGACGGAAGACTTGCCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 ATGTTAACTGTTTCTCCGGCTCCAGTACTCATCGGAAACAACTCAAAGGATACTTACATGGCGGCAGATTTCGCAGATTTTACGACGGAAGACTTGCCGG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G44 ACTTTACGACGGTCGGGGATTTTTCCGATGATCTTCTTGATGGAATCGATTACTACGACGATCTTTTCATTGGTTTCGATGGAGACGATGTTTTGCCGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 ACTTTACGACGGTCGGGGATTTTTCCGATGATCTTCTTGATGGAATCGATTACTACGACGATCTTTTCATTGGTTTCGATGGAGACGATGTTTTGCCGGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G44 TTTGGAGATAGATTCGGAGATTCTTGGGGAATATTCCGGTAGCGGAAGAGATGAGGAACAAGAAATGGAGGGTAACACTTCGACGGCATCGGAGACATCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 TTTGGAGATAGATTCGGAGATTCTTGGGGAATATTCCGGTAGCGGAAGAGATGAGGAACAAGAAATGGAGGGTAACACTTCGACGGCATCGGAGACATCG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G44 GAGAGAGACGTTGGTGTGTGTAAGCAAGAGGGTGGTGGTGGTGGTGACGGTGGTTTTAGGGACAAAACGGTGCGTCGAGGCAAACGTAAAGGGAAGAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 GAGAGAGACGTTGGTGTGTGTAAGCAAGAGGGTGGTGGTGGTGGTGACGGTGGTTTTAGGGACAAAACGGTGCGTCGAGGCAAACGTAAAGGGAAGAAAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G44 GTAAAGATTGTTTATCCGATGAGAACGATATTAAGAAAAAACCTAAGGTGGATTGGACGCCGGAGTTACACCGGAAATTTGTACAAGCGGTGGAGCAATT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: RE_088 GTAAAGATTGTTTATCCGATGAGAACGATATTAAGAAAAAACCTAAGGTGGATTGGACGCCGGAGTTACACCGGACATTTGTACAAGCGGTGGAGCAATT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G44 AGGGGTAGACAAGGCGGTGCCGTCTCGAATCTTGGAAATTATGAACGTTAAATCTCTCACTCGTCACAACGTTGCTAGCCATCTTCAGAAATATAGGTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 AGGGGTAGACAAGGCGGTGCCGTCTCGAATCTTGGAAATTATGAACGTTAAATCTCTCACTCGTCACAACGTTGCTAGCCATCTTCAGAAATATAGGTCA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G44 CATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAATCTCCGGAGACATGCCACGGTGGCAGTGCCCGGAGTAGGAGGAGGAGGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 CATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAATCTCCGGAGACATGCCACGGTGGCAGTGCCCGGAGTAGGAGGAGGAGGGAAGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G44 AGCCGTGGACAGCTCCTGCCTTAGGCTATCCTCCACACGTGGCACCAATGCATCATGGTCACTTCAGGCCTTTGCACGTATGGGGTCATCCTACGTGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 AGCCGTGGACAGCTCCTGCCTTAGGCTATCCTCCACACGTGGCACCAATGCATCATGGTCACTTCAGGCCTTTGCACGTATGGGGTCATCCTACGTGGCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G44 AAAACACAAGCCTAATACTCCGGCGTCTGCTCATCGGACGTATCCAATGCCGGCCATTGCGGCGGCTCCGGCATCTTGGCCAGGTCATCCACCGTACTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 AAAACACAAGCCTAATACTCCGGCGTCTGCTCATCGGACGTATCCAATGCCGGCCATTGCGGCGGCTCCGGCATCTTGGCCAGGTCATCCACCGTACTGG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G44 CATCAGCAACCACTCTATCCACAGGGATATGGTATGGCATCATCGAATCATTCAAGCATCGGTGTTCCCACAAGACAATTAGGACCCACTAATCCTCCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 CATCAGCAACCACTCTATCCACAGGGATATGGTATGGCATCATCGAATCATTCAAGCATCGGTGTTCCCACAAGACAATTAGGACCCACTAATCCTCCCA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT5G44 TCGACATTCATCCCTCGAATGAGAGCATAGATGCAGCTATTGGGGACGTTATATCAAAGCCGTGGCTGCCGCTTCCTTTGGGACTGAAACCGCCGTCGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 TCGACATTCATCCCTCGAATGAGAGCATAGATGCAGCTATTGGGGACGTTATATCAAAGCCGTGGCTGCCGCTTCCTTTGGGACTGAAACCGCCGTCGGT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 AT5G44 TGACGGTGTTATGACGGAGTTACAACGTCAAGGAGTTTCTAATGTTCCTCCTCTTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 TGACGGTGTTATGACGGAGTTACAACGTCAAGGAGTTTCTAATGTTCCTCCTCTTCCT 1110 1120 1130 1140 1150 10 20 30 40 50 60 70 80 90 100 AT5G44 MLTVSPAPVLIGNNSKDTYMAADFADFTTEDLPDFTTVGDFSDDLLDGIDYYDDLFIGFDGDDVLPDLEIDSEILGEYSGSGRDEEQEMEGNTSTASETS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 MLTVSPAPVLIGNNSKDTYMAADFADFTTEDLPDFTTVGDFSDDLLDGIDYYDDLFIGFDGDDVLPDLEIDSEILGEYSGSGRDEEQEMEGNTSTASETS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G44 ERDVGVCKQEGGGGGDGGFRDKTVRRGKRKGKKSKDCLSDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: RE_088 ERDVGVCKQEGGGGGDGGFRDKTVRRGKRKGKKSKDCLSDENDIKKKPKVDWTPELHRTFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G44 HRKHLLAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLHVWGHPTWPKHKPNTPASAHRTYPMPAIAAAPASWPGHPPYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 HRKHLLAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLHVWGHPTWPKHKPNTPASAHRTYPMPAIAAAPASWPGHPPYW 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT5G44 HQQPLYPQGYGMASSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVISKPWLPLPLGLKPPSVDGVMTELQRQGVSNVPPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_088 HQQPLYPQGYGMASSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVISKPWLPLPLGLKPPSVDGVMTELQRQGVSNVPPLP 310 320 330 340 350 360 370 380

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