◆◆◆RE_0925 detail◆◆◆

Code name	RE_0925
Locus	AT2G33620
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0520_20080115_0925_FRW1_255
sequence	>RE_0925_1053bp ATGTCAGGATCTGAGACGGGTTTAATGGCGGCGACCAGAGAATCAATGCAATTTACAATGGCTCTCCACCAGCAGCAGCAACACAGTCAAGCTCAACCTC AGCAGTCTCAGAACAGGCCATTGTCATTCGGTGGAGACGACGGAACTGCTCTTTACAAGCAGCCGATGAGATCAGTATCACCACCGCAGCAGTACCAACC CAACTCAGCTGGTGAGAATTCTGTCTTGAACATGAACTTGCCCGGAGGTGAGTCTGGAGGCATGACTGGAACTGGAAGTGAGCCAGTGAAAAAGAGGAGA GGTAGACCGAGGAAATATGGGCCTGATAGTGGTGAAATGTCACTTGGTTTGAATCCTGGAGCTCCTTCTTTCACTGTCAGCCAACCTAGTAGCGGCGGCC ATGGAGGAGAGAAGAAGAGAGGAAGACCTCCTGGTTCTTCTAGCAAAAGGCTCAAGCTTCAAGCTTTAGGCTCGACTGGAATCGGATTTACGCCTCATGT ACTTACCGTGCTGGCTGGAGAGGATGTATCATCCAAGATAATGGCGTTAACTCATAATGGACCCCGTGCTGTGTGTGTCTTGTCTGCAAATGGAGCCATC TCCAATGTGACTCTCCGCCAGTCTGCCACATCCGGTGGAACTGTTACATATGAGGGGAGATTTGAGATTCTGTCTTTATCGGGATCTTTCCATTTGCTGG AGAACAATGGTCAAAGAAGCAGGACGGGAGGTCTAAGCGTGTCATTATCAAGTCCGGATGGTAATGTCCTCGGTGGCAGTGTAGCTGGTCTTCTTATAGC AGCATCACCTGTTCAGATTGTTGTTGGGAGTTTCTTACCAGACGGAGAAAAAGAACCAAGACAGCATGTGGGACAAATGGGACTGTCGTCACCCGTATTA CCGCGTGTGGCCCCAACGCAGGTGCTGATGACTCCAAGTAGCCCACAATCTCGAGGCACAATGAGTGAGTCATCTTGTGGAGGAGGACATGGAAGCCCTA TTCATCAGAGCACTGGAGGACCTTACAATAACACCATTAACATGCCCTGGAAG >RE_0925_translated MSGSETGLMAATRESMQFTMALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMNLPGGESGGMTGTGSEPVKKRR GRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGHGGEKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAI SNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPRQHVGQMGLSSPVL PRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTINMPWK
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1051/1053 (99.8%)（アミノ酸配列で349/351 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G33 ATGTCAGGATCTGAGACGGGTTTAATGGCGGCGACCAGAGAATCAATGCAATTTACAATGGCTCTCCACCAGCAGCAGCAACACAGTCAAGCTCAACCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 ATGTCAGGATCTGAGACGGGTTTAATGGCGGCGACCAGAGAATCAATGCAATTTACAATGGCTCTCCACCAGCAGCAGCAACACAGTCAAGCTCAACCTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G33 AGCAGTCTCAGAACAGGCCATTGTCATTCGGTGGAGACGACGGAACTGCTCTTTACAAGCAGCCGATGAGATCAGTATCACCACCGCAGCAGTACCAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 AGCAGTCTCAGAACAGGCCATTGTCATTCGGTGGAGACGACGGAACTGCTCTTTACAAGCAGCCGATGAGATCAGTATCACCACCGCAGCAGTACCAACC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G33 CAACTCAGCTGGTGAGAATTCTGTCTTGAACATGAACTTGCCCGGAGGTGAGTCTGGAGGCATGACTGGAACTGGAAGTGAGCCAGTGAAAAAGAGGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 CAACTCAGCTGGTGAGAATTCTGTCTTGAACATGAACTTGCCCGGAGGTGAGTCTGGAGGCATGACTGGAACTGGAAGTGAGCCAGTGAAAAAGAGGAGA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G33 GGTAGACCGAGGAAATATGGGCCTGATAGTGGTGAAATGTCACTTGGTTTGAATCCTGGAGCTCCTTCTTTCACTGTCAGCCAACCTAGTAGCGGCGGCG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 GGTAGACCGAGGAAATATGGGCCTGATAGTGGTGAAATGTCACTTGGTTTGAATCCTGGAGCTCCTTCTTTCACTGTCAGCCAACCTAGTAGCGGCGGCC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G33 ATGGAGGAGAGAAGAAGAGAGGAAGACCTCCTGGTTCTTCTAGCAAAAGGCTCAAGCTTCAAGCTTTAGGCTCGACTGGAATCGGATTTACGCCTCATGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 ATGGAGGAGAGAAGAAGAGAGGAAGACCTCCTGGTTCTTCTAGCAAAAGGCTCAAGCTTCAAGCTTTAGGCTCGACTGGAATCGGATTTACGCCTCATGT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G33 ACTTACCGTGCTGGCTGGAGAGGATGTATCATCCAAGATAATGGCGTTAACTCATAATGGACCCCGTGCTGTGTGTGTCTTGTCTGCAAATGGAGCCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 ACTTACCGTGCTGGCTGGAGAGGATGTATCATCCAAGATAATGGCGTTAACTCATAATGGACCCCGTGCTGTGTGTGTCTTGTCTGCAAATGGAGCCATC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G33 TCCAATGTGACTCTCCGCCAGTCTGCCACATCCGGTGGAACTGTTACATATGAGGGGAGATTTGAGATTCTGTCTTTATCGGGATCTTTCCATTTGCTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 TCCAATGTGACTCTCCGCCAGTCTGCCACATCCGGTGGAACTGTTACATATGAGGGGAGATTTGAGATTCTGTCTTTATCGGGATCTTTCCATTTGCTGG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G33 AGAACAATGGTCAAAGAAGCAGGACGGGAGGTCTAAGCGTGTCATTATCAAGTCCGGATGGTAATGTCCTCGGTGGCAGTGTAGCTGGTCTTCTTATAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 AGAACAATGGTCAAAGAAGCAGGACGGGAGGTCTAAGCGTGTCATTATCAAGTCCGGATGGTAATGTCCTCGGTGGCAGTGTAGCTGGTCTTCTTATAGC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G33 AGCATCACCTGTTCAGATTGTTGTTGGGAGTTTCTTACCAGACGGAGAAAAAGAACCAAAACAGCATGTGGGACAAATGGGACTGTCGTCACCCGTATTA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: RE_092 AGCATCACCTGTTCAGATTGTTGTTGGGAGTTTCTTACCAGACGGAGAAAAAGAACCAAGACAGCATGTGGGACAAATGGGACTGTCGTCACCCGTATTA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G33 CCGCGTGTGGCCCCAACGCAGGTGCTGATGACTCCAAGTAGCCCACAATCTCGAGGCACAATGAGTGAGTCATCTTGTGGAGGAGGACATGGAAGCCCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 CCGCGTGTGGCCCCAACGCAGGTGCTGATGACTCCAAGTAGCCCACAATCTCGAGGCACAATGAGTGAGTCATCTTGTGGAGGAGGACATGGAAGCCCTA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 AT2G33 TTCATCAGAGCACTGGAGGACCTTACAATAACACCATTAACATGCCCTGGAAG ::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 TTCATCAGAGCACTGGAGGACCTTACAATAACACCATTAACATGCCCTGGAAG 1010 1020 1030 1040 1050 10 20 30 40 50 60 70 80 90 100 AT2G33 MSGSETGLMAATRESMQFTMALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMNLPGGESGGMTGTGSEPVKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 MSGSETGLMAATRESMQFTMALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMNLPGGESGGMTGTGSEPVKKRR 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G33 GRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGGEKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAI ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 GRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGHGGEKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAI 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G33 SNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPKQHVGQMGLSSPVL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: RE_092 SNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPRQHVGQMGLSSPVL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT2G33 PRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTINMPWK ::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 PRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTINMPWK 310 320 330 340 350

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