◆◆◆RE_0929 detail◆◆◆

Code name	RE_0929
Locus	AT3G61310
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0520_20080115_0929_FRW1_255
sequence	>RE_0929_1062bp ATGGATCGAAGAGACGCAATGGCGTTATCCGGGTCGGGCTCTTACTATATCCAAAGAGGAATCCCCGGTTCTGGTCCTCCTCCTCCTCAAACTCAACCAA CGTTTCACGGATCACAAGGATTTCATCATTTCACCAATTCCATCTCTCCTTTTGGGTCAAACCCAAACCCAAATCCAAACCCTGGAGGTGTCTCTACTGG ATTCGTGTCTCCTCCTTTACCCGTTGACTCTTCTCCGGCTGATTCGTCAGCGGCGGCGGCGGGAGCTTTGGTTGCTCCTCCTTCAGGTGACACGTCTGTG AAGCGGAAGAGAGGACGGCCTAGAAAATATGGACAAGATGGTGGTTCTGTTTCGTTGGCATTGTCTCCTTCTATCTCCAACGTTTCCCCGAACTCTAACA AACGTGGCCGTGGAAGACCTCCTGGCTCCGGCAAGAAGCAACGGCTATCTTCCATTGGTGAAATGATGCCTTCATCAACTGGGATGAGCTTCACACCGCA CGTAATCGTAGTTTCCATTGGTGAAGACATTGCTTCAAAGGTTATATCGTTCTCGCATCAAGGTCCACGAGCGATATGTGTCTTATCCGCAAGTGGTGCT GTCTCTACTGCAACTCTTCTTCAGCCAGCACCTTCTCATGGAACTATTATATACGAGGGTCTATTCGAGCTCATATCTCTCTCAACTTCTTATCTGAACA CAACTGACAATGACTACCCAAACCGCACTGGAAGTCTAGCGGTCTCACTTGCTAGCCCCGATGGTCGTGTCATTGGTGGTGGAATTGGAGGTCCTCTAAT AGCAGCAAGCCAAGTCCAGGTCATTGTTGGCAGCTTCATTTGGGCAATTCCGAAAGGGAAGATTAAAAAACGTGAAGAAACTTCTGAAGATGTCCAAGAT ACTGATGCTTTGGAAAACAACAACGATAACACAGCAGCAACGTCACCTCCTGTTCCTCAGCAAAGTCAGAACATTGTTCAGACTCCTGTAGGCATTTGGT CAACTGGTTCAAGGTCAATGGATATGCATCACCCCCATATGGACATTGATCTAATGCGTGGA >RE_0929_translated MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPNPGGVSTGFVSPPLPVDSSPADSSAAAAGALVAPPSGDTSV KRKRGRPRKYGQDGGSVSLALSPSISNVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIGEDIASKVISFSHQGPRAICVLSASGA VSTATLLQPAPSHGTIIYEGLFELISLSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKGKIKKREETSEDVQD TDALENNNDNTAATSPPVPQQSQNIVQTPVGIWSTGSRSMDMHHPHMDIDLMRG
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1060/1062 (99.8%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G61 ATGGATCGAAGAGACGCAATGGCGTTATCCGGGTCGGGTTCTTACTATATCCAAAGAGGAATCCCCGGTTCTGGTCCTCCTCCTCCTCAAACTCAACCAA :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 ATGGATCGAAGAGACGCAATGGCGTTATCCGGGTCGGGCTCTTACTATATCCAAAGAGGAATCCCCGGTTCTGGTCCTCCTCCTCCTCAAACTCAACCAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G61 CGTTTCACGGATCACAAGGATTTCATCATTTCACCAATTCCATCTCTCCTTTTGGGTCAAACCCAAACCCAAATCCAAACCCTGGAGGTGTCTCTACTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 CGTTTCACGGATCACAAGGATTTCATCATTTCACCAATTCCATCTCTCCTTTTGGGTCAAACCCAAACCCAAATCCAAACCCTGGAGGTGTCTCTACTGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G61 ATTCGTGTCTCCTCCTTTACCCGTTGACTCTTCTCCGGCTGATTCGTCAGCGGCGGCGGCGGGAGCTTTGGTTGCTCCTCCTTCAGGTGACACGTCTGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 ATTCGTGTCTCCTCCTTTACCCGTTGACTCTTCTCCGGCTGATTCGTCAGCGGCGGCGGCGGGAGCTTTGGTTGCTCCTCCTTCAGGTGACACGTCTGTG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G61 AAGCGGAAGAGAGGACGGCCTAGAAAATATGGACAAGATGGTGGTTCTGTTTCGTTGGCATTGTCTCCTTCTATCTCCAACGTTTCCCCGAACTCTAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 AAGCGGAAGAGAGGACGGCCTAGAAAATATGGACAAGATGGTGGTTCTGTTTCGTTGGCATTGTCTCCTTCTATCTCCAACGTTTCCCCGAACTCTAACA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G61 AACGTGGCCGTGGAAGACCTCCTGGCTCCGGCAAGAAGCAACGGCTATCTTCCATTGGTGAAATGATGCCTTCATCAACTGGGATGAGCTTCACACCGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 AACGTGGCCGTGGAAGACCTCCTGGCTCCGGCAAGAAGCAACGGCTATCTTCCATTGGTGAAATGATGCCTTCATCAACTGGGATGAGCTTCACACCGCA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G61 TGTAATCGTAGTTTCCATTGGTGAAGACATTGCTTCAAAGGTTATATCGTTCTCGCATCAAGGTCCACGAGCGATATGTGTCTTATCCGCAAGTGGTGCT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 CGTAATCGTAGTTTCCATTGGTGAAGACATTGCTTCAAAGGTTATATCGTTCTCGCATCAAGGTCCACGAGCGATATGTGTCTTATCCGCAAGTGGTGCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G61 GTCTCTACTGCAACTCTTCTTCAGCCAGCACCTTCTCATGGAACTATTATATACGAGGGTCTATTCGAGCTCATATCTCTCTCAACTTCTTATCTGAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 GTCTCTACTGCAACTCTTCTTCAGCCAGCACCTTCTCATGGAACTATTATATACGAGGGTCTATTCGAGCTCATATCTCTCTCAACTTCTTATCTGAACA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G61 CAACTGACAATGACTACCCAAACCGCACTGGAAGTCTAGCGGTCTCACTTGCTAGCCCCGATGGTCGTGTCATTGGTGGTGGAATTGGAGGTCCTCTAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 CAACTGACAATGACTACCCAAACCGCACTGGAAGTCTAGCGGTCTCACTTGCTAGCCCCGATGGTCGTGTCATTGGTGGTGGAATTGGAGGTCCTCTAAT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G61 AGCAGCAAGCCAAGTCCAGGTCATTGTTGGCAGCTTCATTTGGGCAATTCCGAAAGGGAAGATTAAAAAACGTGAAGAAACTTCTGAAGATGTCCAAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 AGCAGCAAGCCAAGTCCAGGTCATTGTTGGCAGCTTCATTTGGGCAATTCCGAAAGGGAAGATTAAAAAACGTGAAGAAACTTCTGAAGATGTCCAAGAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G61 ACTGATGCTTTGGAAAACAACAACGATAACACAGCAGCAACGTCACCTCCTGTTCCTCAGCAAAGTCAGAACATTGTTCAGACTCCTGTAGGCATTTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 ACTGATGCTTTGGAAAACAACAACGATAACACAGCAGCAACGTCACCTCCTGTTCCTCAGCAAAGTCAGAACATTGTTCAGACTCCTGTAGGCATTTGGT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 AT3G61 CAACTGGTTCAAGGTCAATGGATATGCATCACCCCCATATGGACATTGATCTAATGCGTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 CAACTGGTTCAAGGTCAATGGATATGCATCACCCCCATATGGACATTGATCTAATGCGTGGA 1010 1020 1030 1040 1050 1060 10 20 30 40 50 60 70 80 90 100 AT3G61 MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPNPGGVSTGFVSPPLPVDSSPADSSAAAAGALVAPPSGDTSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 MDRRDAMALSGSGSYYIQRGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPNPNPNPGGVSTGFVSPPLPVDSSPADSSAAAAGALVAPPSGDTSV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G61 KRKRGRPRKYGQDGGSVSLALSPSISNVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIGEDIASKVISFSHQGPRAICVLSASGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 KRKRGRPRKYGQDGGSVSLALSPSISNVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIGEDIASKVISFSHQGPRAICVLSASGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G61 VSTATLLQPAPSHGTIIYEGLFELISLSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKGKIKKREETSEDVQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 VSTATLLQPAPSHGTIIYEGLFELISLSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKGKIKKREETSEDVQD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT3G61 TDALENNNDNTAATSPPVPQQSQNIVQTPVGIWSTGSRSMDMHHPHMDIDLMRG :::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_092 TDALENNNDNTAATSPPVPQQSQNIVQTPVGIWSTGSRSMDMHHPHMDIDLMRG 310 320 330 340 350

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