◆◆◆RE_0931 detail◆◆◆

Code name	RE_0931
Locus	AT4G12080
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0420_アミノ酸配列100%一致
sequence	>RE_0931_1068bp ATGGTCTTAAATATGGAGTCTACCGGAGAAGCTGTTAGATCAACCACCGGTAACGACGGTGGTATTACGGTGGTTAGATCCGACGCGCCGTCAGATTTCC ACGTAGCTCAAAGATCAGAAAGCTCAAACCAATCTCCCACCTCTGTCACTCCTCCTCCACCACAGCCATCGTCTCATCACACAGCTCCTCCGCCGCTGCA AATTTCGACGGTGACGACTACGACTACCACGGCCGCGATGGAAGGTATCTCCGGTGGACTGATGAAGAAGAAGCGTGGACGGCCAAGGAAGTATGGACCG GACGGGACTGTTGTAGCGTTATCTCCTAAACCGATTTCATCAGCGCCGGCGCCGTCGCATCTTCCGCCGCCGAGTTCACACGTCATCGATTTCTCCGCTT CTGAGAAACGTAGCAAAGTGAAACCAACGAACTCGTTTAACAGAACAAAGTATCATCACCAAGTTGAGAATTTGGGTGAATGGGCTCCTTGCTCCGTCGG TGGTAATTTCACACCTCATATAATCACAGTCAACACCGGCGAGGATGTAACAATGAAGATAATCTCGTTTTCGCAACAAGGACCTCGCTCTATTTGTGTT CTGTCAGCAAACGGTGTTATTTCAAGCGTTACACTTCGTCAGCCAGATTCCTCCGGCGGCACATTGACATACGAAGGTCGGTTTGAGATATTATCATTAT CCGGGTCATTCATGCCTAATGATTCAGGCGGAACACGAAGTAGAACGGGAGGAATGAGTGTATCGTTAGCAAGTCCCGATGGACGTGTAGTAGGCGGTGG CCTCGCCGGTTTACTAGTAGCCGCGAGTCCGGTTCAGGTGGTTGTAGGAAGTTTTTTAGCGGGCACTGACCATCAAGATCAGAAACCGAAAAAGAACAAA CATGATTTCATGTTGTCGAGTCCTACCGCTGCAATTCCTATCTCTAGTGCAGCTGATCACCGGACAATCCATTCGGTCTCGTCTCTTCCGGTCAATAATA ATACATGGCAGACTTCTTTAGCTTCCGATCCAAGAAACAAGCATACCGATATTAATGTCAATGTAACT >RE_0931_translated MVLNMESTGEAVRSTTGNDGGITVVRSDAPSDFHVAQRSESSNQSPTSVTPPPPQPSSHHTAPPPLQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGP DGTVVALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICV LSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKKNK HDFMLSSPTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKHTDINVNVT
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1066/1068 (99.8%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G12 ATGGTCTTAAATATGGAGTCTACCGGAGAAGCTGTTAGATCAACCACCGGTAACGACGGTGGTATTACGGTGGTTAGATCCGACGCGCCGTCAGATTTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ATGGTCTTAAATATGGAGTCTACCGGAGAAGCTGTTAGATCAACCACCGGTAACGACGGTGGTATTACGGTGGTTAGATCCGACGCGCCGTCAGATTTCC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G12 ACGTAGCTCAAAGATCAGAAAGCTCAAACCAATCTCCCACCTCTGTCACTCCTCCTCCACCACAGCCATCGTCTCATCACACAGCTCCTCCGCCGCTGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ACGTAGCTCAAAGATCAGAAAGCTCAAACCAATCTCCCACCTCTGTCACTCCTCCTCCACCACAGCCATCGTCTCATCACACAGCTCCTCCGCCGCTGCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G12 AATTTCGACGGTGACGACTACGACTACGACGGCCGCGATGGAAGGTATCTCCGGTGGACTGATGAAGAAGAAGCGTGGACGGCCAAGGAAGTATGGACCG ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 AATTTCGACGGTGACGACTACGACTACCACGGCCGCGATGGAAGGTATCTCCGGTGGACTGATGAAGAAGAAGCGTGGACGGCCAAGGAAGTATGGACCG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G12 GACGGGACTGTTGTAGCGTTATCTCCTAAACCGATTTCATCAGCGCCGGCGCCGTCGCATCTTCCGCCGCCGAGTTCACACGTCATCGATTTCTCCGCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 GACGGGACTGTTGTAGCGTTATCTCCTAAACCGATTTCATCAGCGCCGGCGCCGTCGCATCTTCCGCCGCCGAGTTCACACGTCATCGATTTCTCCGCTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G12 CTGAGAAACGTAGCAAAGTGAAACCAACGAACTCGTTTAACAGAACAAAGTATCATCACCAAGTTGAGAATTTGGGTGAATGGGCTCCTTGCTCCGTCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CTGAGAAACGTAGCAAAGTGAAACCAACGAACTCGTTTAACAGAACAAAGTATCATCACCAAGTTGAGAATTTGGGTGAATGGGCTCCTTGCTCCGTCGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G12 TGGTAATTTCACACCTCATATAATCACAGTCAACACCGGCGAGGATGTAACAATGAAGATAATCTCGTTTTCGCAACAAGGACCTCGCTCTATTTGTGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 TGGTAATTTCACACCTCATATAATCACAGTCAACACCGGCGAGGATGTAACAATGAAGATAATCTCGTTTTCGCAACAAGGACCTCGCTCTATTTGTGTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G12 CTGTCAGCAAACGGTGTTATTTCAAGCGTTACACTTCGTCAGCCAGATTCCTCTGGCGGCACATTGACATACGAAGGTCGGTTTGAGATATTATCATTAT ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: RE_093 CTGTCAGCAAACGGTGTTATTTCAAGCGTTACACTTCGTCAGCCAGATTCCTCCGGCGGCACATTGACATACGAAGGTCGGTTTGAGATATTATCATTAT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G12 CCGGGTCATTCATGCCTAATGATTCAGGCGGAACACGAAGTAGAACGGGAGGAATGAGTGTATCGTTAGCAAGTCCCGATGGACGTGTAGTAGGCGGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CCGGGTCATTCATGCCTAATGATTCAGGCGGAACACGAAGTAGAACGGGAGGAATGAGTGTATCGTTAGCAAGTCCCGATGGACGTGTAGTAGGCGGTGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G12 CCTCGCCGGTTTACTAGTAGCCGCGAGTCCGGTTCAGGTGGTTGTAGGAAGTTTTTTAGCGGGCACTGACCATCAAGATCAGAAACCGAAAAAGAACAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CCTCGCCGGTTTACTAGTAGCCGCGAGTCCGGTTCAGGTGGTTGTAGGAAGTTTTTTAGCGGGCACTGACCATCAAGATCAGAAACCGAAAAAGAACAAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G12 CATGATTTCATGTTGTCGAGTCCTACCGCTGCAATTCCTATCTCTAGTGCAGCTGATCACCGGACAATCCATTCGGTCTCGTCTCTTCCGGTCAATAATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CATGATTTCATGTTGTCGAGTCCTACCGCTGCAATTCCTATCTCTAGTGCAGCTGATCACCGGACAATCCATTCGGTCTCGTCTCTTCCGGTCAATAATA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 AT4G12 ATACATGGCAGACTTCTTTAGCTTCCGATCCAAGAAACAAGCATACCGATATTAATGTCAATGTAACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ATACATGGCAGACTTCTTTAGCTTCCGATCCAAGAAACAAGCATACCGATATTAATGTCAATGTAACT 1010 1020 1030 1040 1050 1060 10 20 30 40 50 60 70 80 90 100 AT4G12 MVLNMESTGEAVRSTTGNDGGITVVRSDAPSDFHVAQRSESSNQSPTSVTPPPPQPSSHHTAPPPLQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 MVLNMESTGEAVRSTTGNDGGITVVRSDAPSDFHVAQRSESSNQSPTSVTPPPPQPSSHHTAPPPLQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGP 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G12 DGTVVALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 DGTVVALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICV 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G12 LSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 LSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKKNK 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT4G12 HDFMLSSPTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKHTDINVNVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 HDFMLSSPTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKHTDINVNVT 310 320 330 340 350

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