◆◆◆RE_0936 detail◆◆◆

Code name	RE_0936
Locus	AT5G46640
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0318_アミノ酸配列100%一致
sequence	>RE_0936_1158bp ATGGATTCCAGAGACATCCCACCGTCACATAACCAGCTTCAACCACCACCGGGAATGTTAATGTCTCATTACCGTAACCCTAACGCCGCCGCTTCACCAT TAATGGTTCCCACTTCCACATCTCAACCGATTCAACACCCTCGTCTTCCTTTTGGCAATCAACAACAATCTCAAACGTTTCATCAGCAGCAACAACAACA AATGGATCAGAAGACTCTTGAATCTCTTGGATTTGGTGATGGATCACCTTCTTCTCAACCGATGCGATTCGGGATTGATGATCAGAATCAGCAACTGCAA GTGAAGAAGAAGCGAGGAAGGCCGAGAAAGTATACTCCTGATGGTAGCATTGCTTTAGGTTTAGCTCCTACGTCTCCTCTTCTCTCTGCAGCTTCTAATT CTTACGGTGAGGGTGGTGTTGGAGATAGTGGTGGAAATGGAAACTCTGTTGATCCACCTGTTAAACGTAACAGAGGAAGGCCTCCTGGTTCTAGTAAGAA ACAGCTTGATGCTTTAGGAGGAACTTCAGGAGTTGGGTTTACACCTCATGTCATTGAAGTGAACACAGGAGAGGACATAGCGTCAAAGGTGATGGCTTTT TCGGATCAAGGGTCAAGAACAATTTGTATTCTCTCTGCAAGTGGTGCAGTTTCTAGAGTGATGCTTCGTCAAGCTTCTCATTCTAGTGGAATCGTTACTT ATGAGGGACGATTTGAGATCATTACTCTCTCAGGCTCAGTCTTGAATTATGAGGTAAATGGTTCCACCAACAGAAGTGGTAACTTGAGTGTGGCTTTGGC TGGACCTGATGGCGGCATCGTAGGTGGCAGTGTAGTTGGTAATCTAGTAGCTGCAACACAAGTCCAGGTGATAGTGGGAAGCTTTGTTGCAGAAGCAAAG AAACCGAAACAAAGTAGTGTTAACATTGCTCGGGGGCAGAATCCTGAACCGGCTTCAGCGCCGGCTAACATGTTGAACTTTGGATCAGTCTCTCAAGGAC CATCGAGCGAGTCATCAGAAGAGAATGAGAGCGGTTCTCCTGCAATGCACCGTGACAATAATAATGGGATATATGGAGCTCAACAACAACAACAACAACA ACCTCTTCATCCTCATCAGATGCAAATGTACCAACATCTTTGGTCTAATCATGGTCAA >RE_0936_translated MDSRDIPPSHNQLQPPPGMLMSHYRNPNAAASPLMVPTSTSQPIQHPRLPFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQ VKKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAF SDQGSRTICILSASGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQVQVIVGSFVAEAK KPKQSSVNIARGQNPEPASAPANMLNFGSVSQGPSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHGQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1157/1158 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G46 ATGGATTCCAGAGACATCCCACCGTCACATAACCAGCTTCAACCACCACCGGGAATGTTAATGTCTCATTACCGTAACCCTAACGCCGCCGCTTCACCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ATGGATTCCAGAGACATCCCACCGTCACATAACCAGCTTCAACCACCACCGGGAATGTTAATGTCTCATTACCGTAACCCTAACGCCGCCGCTTCACCAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G46 TAATGGTTCCCACTTCCACATCTCAACCGATTCAACACCCTCGTCTTCCTTTTGGCAATCAACAACAATCTCAAACGTTTCATCAGCAGCAACAACAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 TAATGGTTCCCACTTCCACATCTCAACCGATTCAACACCCTCGTCTTCCTTTTGGCAATCAACAACAATCTCAAACGTTTCATCAGCAGCAACAACAACA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G46 AATGGATCAGAAGACTCTTGAATCTCTTGGATTTGGTGATGGATCACCTTCTTCTCAACCGATGCGATTCGGGATCGATGATCAGAATCAGCAACTGCAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: RE_093 AATGGATCAGAAGACTCTTGAATCTCTTGGATTTGGTGATGGATCACCTTCTTCTCAACCGATGCGATTCGGGATTGATGATCAGAATCAGCAACTGCAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G46 GTGAAGAAGAAGCGAGGAAGGCCGAGAAAGTATACTCCTGATGGTAGCATTGCTTTAGGTTTAGCTCCTACGTCTCCTCTTCTCTCTGCAGCTTCTAATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 GTGAAGAAGAAGCGAGGAAGGCCGAGAAAGTATACTCCTGATGGTAGCATTGCTTTAGGTTTAGCTCCTACGTCTCCTCTTCTCTCTGCAGCTTCTAATT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G46 CTTACGGTGAGGGTGGTGTTGGAGATAGTGGTGGAAATGGAAACTCTGTTGATCCACCTGTTAAACGTAACAGAGGAAGGCCTCCTGGTTCTAGTAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CTTACGGTGAGGGTGGTGTTGGAGATAGTGGTGGAAATGGAAACTCTGTTGATCCACCTGTTAAACGTAACAGAGGAAGGCCTCCTGGTTCTAGTAAGAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G46 ACAGCTTGATGCTTTAGGAGGAACTTCAGGAGTTGGGTTTACACCTCATGTCATTGAAGTGAACACAGGAGAGGACATAGCGTCAAAGGTGATGGCTTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ACAGCTTGATGCTTTAGGAGGAACTTCAGGAGTTGGGTTTACACCTCATGTCATTGAAGTGAACACAGGAGAGGACATAGCGTCAAAGGTGATGGCTTTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G46 TCGGATCAAGGGTCAAGAACAATTTGTATTCTCTCTGCAAGTGGTGCAGTTTCTAGAGTGATGCTTCGTCAAGCTTCTCATTCTAGTGGAATCGTTACTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 TCGGATCAAGGGTCAAGAACAATTTGTATTCTCTCTGCAAGTGGTGCAGTTTCTAGAGTGATGCTTCGTCAAGCTTCTCATTCTAGTGGAATCGTTACTT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G46 ATGAGGGACGATTTGAGATCATTACTCTCTCAGGCTCAGTCTTGAATTATGAGGTAAATGGTTCCACCAACAGAAGTGGTAACTTGAGTGTGGCTTTGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ATGAGGGACGATTTGAGATCATTACTCTCTCAGGCTCAGTCTTGAATTATGAGGTAAATGGTTCCACCAACAGAAGTGGTAACTTGAGTGTGGCTTTGGC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G46 TGGACCTGATGGCGGCATCGTAGGTGGCAGTGTAGTTGGTAATCTAGTAGCTGCAACACAAGTCCAGGTGATAGTGGGAAGCTTTGTTGCAGAAGCAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 TGGACCTGATGGCGGCATCGTAGGTGGCAGTGTAGTTGGTAATCTAGTAGCTGCAACACAAGTCCAGGTGATAGTGGGAAGCTTTGTTGCAGAAGCAAAG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G46 AAACCGAAACAAAGTAGTGTTAACATTGCTCGGGGGCAGAATCCTGAACCGGCTTCAGCGCCGGCTAACATGTTGAACTTTGGATCAGTCTCTCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 AAACCGAAACAAAGTAGTGTTAACATTGCTCGGGGGCAGAATCCTGAACCGGCTTCAGCGCCGGCTAACATGTTGAACTTTGGATCAGTCTCTCAAGGAC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT5G46 CATCGAGCGAGTCATCAGAAGAGAATGAGAGCGGTTCTCCTGCAATGCACCGTGACAATAATAATGGGATATATGGAGCTCAACAACAACAACAACAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CATCGAGCGAGTCATCAGAAGAGAATGAGAGCGGTTCTCCTGCAATGCACCGTGACAATAATAATGGGATATATGGAGCTCAACAACAACAACAACAACA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 AT5G46 ACCTCTTCATCCTCATCAGATGCAAATGTACCAACATCTTTGGTCTAATCATGGTCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ACCTCTTCATCCTCATCAGATGCAAATGTACCAACATCTTTGGTCTAATCATGGTCAA 1110 1120 1130 1140 1150 10 20 30 40 50 60 70 80 90 100 AT5G46 MDSRDIPPSHNQLQPPPGMLMSHYRNPNAAASPLMVPTSTSQPIQHPRLPFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 MDSRDIPPSHNQLQPPPGMLMSHYRNPNAAASPLMVPTSTSQPIQHPRLPFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G46 VKKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 VKKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAF 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G46 SDQGSRTICILSASGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQVQVIVGSFVAEAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 SDQGSRTICILSASGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQVQVIVGSFVAEAK 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT5G46 KPKQSSVNIARGQNPEPASAPANMLNFGSVSQGPSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 KPKQSSVNIARGQNPEPASAPANMLNFGSVSQGPSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHGQ 310 320 330 340 350 360 370 380

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