◆◆◆RE_0938 detail◆◆◆

Code name	RE_0938
Locus	AT5G51590
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0318_アミノ酸配列70%以上一致
sequence	>RE_0938_1257bp ATGGAGGAGAGAGAAGGAACTAACATCAACAACATCCCAACCAGTTTTGGTCTGAAACAACATGAAACTCCTCTTCCTCCTCCTGGTTACCCACCACGGT CTGAAAACCCTAATCTTTTTCCGGTGGGTCAATCCAGCACTTCCTCCGCCGCCGCCGCGGTGAAACCTTCTGAGAATGTTGCTCCTCCTTTTAGCTTAAC AATGCCGGTGGAGAATTCTTCTTCTGAGTTGAAGAAGAAGGGAGGGAGACCAAGAAAGTATAACCCTGACGGCTCACTCGCTGTGACTCTCTCTCCTATG CCTATCTCATCCTCCGTTCCGTTGACGTCGGAGTTTGGTTCTCGGAAACGAGGAAGAGGTCGAGGAAGAGGCAGAGGAAGAGGACGAGGACGTGGACAAG GACAAGGAAGCAGAGAGCCCAATAACAACAACAACGACAACAATTGGCTCAAGAATCCTCAGATGTTCGAATTTAACAACAACACTCCTACTTCTGGTGG AGGAGGACCTGCTGAAATTGTCAGTCCAAGTTTTACACCTCATGTGCTCACAGTAAATGCCGGTGAGGATGTGACAATGAAGATAATGACATTCTCTCAA CAAGGCTCGCGTGCTATTTGTATTCTTTCAGCGAACGGTCCCATATCCAATGTTACACTTCGTCAATCTATGACATCTGGTGGTACTCTCACTTATGAGG GTCATTTTGAGATTCTTTCTTTGACGGGTTCATTTATACCAAGCGAGAGTGGAGGAACCCGAAGCAGAGCTGGTGGGATGAGTGTCTCTCTTGCAGGACA AGATGGTCGTGTCTTTGGTGGTGGACTTGCTGGTCTCTTTATTGCCGCTGGTCCTGTTCAGGTAATGGTAGGGAGTTTTATAGCGGGTCAGGAGGAATCG CAGCAGCAGCAGCAGCAGATAAAGAAGCAAAGAAGGGAAAGACTCGGGATCCCGACAACAACACAAGCTTCTAATATCTCATTCGGTGGCTCAGCGGAAG ATCCTAAGGCTAGATACGGGCTCAACAAGCCTGTTGTTATTCAGCCACCACCGGTGTCTGCACCACCTGTGTCCTTTTCGCATGAACCAAGTACTAACAC CGTCCATGGTTACTATGCAAATAACACAGCTAACCATATCAAGGATCTCTTCTCTTCCCTCCCTGGAGAAGATAGGGAAGAAGATGAGGATGATTTAGAA GGTGAAGATGATGAAGAATTCGGAGGCCATAGCGAATCTGACACCGAGGTTCCAAGC >RE_0938_translated MEEREGTNINNIPTSFGLKQHETPLPPPGYPPRSENPNLFPVGQSSTSSAAAAVKPSENVAPPFSLTMPVENSSSELKKKGGRPRKYNPDGSLAVTLSPM PISSSVPLTSEFGSRKRGRGRGRGRGRGRGRGQGQGSREPNNNNNDNNWLKNPQMFEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDVTMKIMTFSQ QGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRSRAGGMSVSLAGQDGRVFGGGLAGLFIAAGPVQVMVGSFIAGQEES QQQQQQIKKQRRERLGIPTTTQASNISFGGSAEDPKARYGLNKPVVIQPPPVSAPPVSFSHEPSTNTVHGYYANNTANHIKDLFSSLPGEDREEDEDDLE GEDDEEFGGHSESDTEVPS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1255/1257 (99.8%)（アミノ酸配列で418/419 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G51 ATGGAGGAGAGAGAAGGAACTAACATCAACAACATCCCAACCAGTTTTGGTCTGAAACAACATGAAACTCCTCTTCCTCCTCCTGGTTACCCACCACGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ATGGAGGAGAGAGAAGGAACTAACATCAACAACATCCCAACCAGTTTTGGTCTGAAACAACATGAAACTCCTCTTCCTCCTCCTGGTTACCCACCACGGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G51 CTGAAAACCCTAATCTTTTTCCGGTGGGTCAATCCAGCACTTCCTCCGCCGCCGCCGCGGTGAAACCTTCTGAGAATGTTGCTCCTCCTTTTAGCTTAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CTGAAAACCCTAATCTTTTTCCGGTGGGTCAATCCAGCACTTCCTCCGCCGCCGCCGCGGTGAAACCTTCTGAGAATGTTGCTCCTCCTTTTAGCTTAAC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G51 AATGCCGGTGGAGAATTCTTCTTCTGAGTTGAAGAAGAAGAGAGGGAGACCAAGAAAGTATAACCCTGACGGCTCACTCGCTGTGACTCTCTCTCCTATG :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 AATGCCGGTGGAGAATTCTTCTTCTGAGTTGAAGAAGAAGGGAGGGAGACCAAGAAAGTATAACCCTGACGGCTCACTCGCTGTGACTCTCTCTCCTATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G51 CCTATCTCATCCTCCGTTCCGTTGACGTCGGAGTTTGGTTCTCGGAAACGAGGAAGAGGTCGAGGAAGAGGCAGAGGAAGAGGACGAGGACGTGGACAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CCTATCTCATCCTCCGTTCCGTTGACGTCGGAGTTTGGTTCTCGGAAACGAGGAAGAGGTCGAGGAAGAGGCAGAGGAAGAGGACGAGGACGTGGACAAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G51 GACAAGGAAGCAGAGAGCCCAATAACAACAACAACGACAACAATTGGCTCAAGAATCCTCAGATGTTCGAATTTAACAACAACACTCCTACTTCTGGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 GACAAGGAAGCAGAGAGCCCAATAACAACAACAACGACAACAATTGGCTCAAGAATCCTCAGATGTTCGAATTTAACAACAACACTCCTACTTCTGGTGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G51 AGGAGGACCTGCTGAAATTGTCAGTCCAAGTTTTACACCTCATGTGCTCACAGTAAATGCCGGTGAGGATGTGACAATGAAGATAATGACATTCTCTCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 AGGAGGACCTGCTGAAATTGTCAGTCCAAGTTTTACACCTCATGTGCTCACAGTAAATGCCGGTGAGGATGTGACAATGAAGATAATGACATTCTCTCAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G51 CAAGGCTCGCGTGCTATTTGTATTCTTTCAGCGAACGGTCCCATATCCAATGTTACACTTCGTCAATCTATGACATCTGGTGGTACTCTCACTTATGAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CAAGGCTCGCGTGCTATTTGTATTCTTTCAGCGAACGGTCCCATATCCAATGTTACACTTCGTCAATCTATGACATCTGGTGGTACTCTCACTTATGAGG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G51 GTCATTTTGAGATTCTTTCTTTGACGGGTTCGTTTATACCAAGCGAGAGTGGAGGAACCCGAAGCAGAGCTGGTGGGATGAGTGTCTCTCTTGCAGGACA ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 GTCATTTTGAGATTCTTTCTTTGACGGGTTCATTTATACCAAGCGAGAGTGGAGGAACCCGAAGCAGAGCTGGTGGGATGAGTGTCTCTCTTGCAGGACA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G51 AGATGGTCGTGTCTTTGGTGGTGGACTTGCTGGTCTCTTTATTGCCGCTGGTCCTGTTCAGGTAATGGTAGGGAGTTTTATAGCGGGTCAGGAGGAATCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 AGATGGTCGTGTCTTTGGTGGTGGACTTGCTGGTCTCTTTATTGCCGCTGGTCCTGTTCAGGTAATGGTAGGGAGTTTTATAGCGGGTCAGGAGGAATCG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G51 CAGCAGCAGCAGCAGCAGATAAAGAAGCAAAGAAGGGAAAGACTCGGGATCCCGACAACAACACAAGCTTCTAATATCTCATTCGGTGGCTCAGCGGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CAGCAGCAGCAGCAGCAGATAAAGAAGCAAAGAAGGGAAAGACTCGGGATCCCGACAACAACACAAGCTTCTAATATCTCATTCGGTGGCTCAGCGGAAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT5G51 ATCCTAAGGCTAGATACGGGCTCAACAAGCCTGTTGTTATTCAGCCACCACCGGTGTCTGCACCACCTGTGTCCTTTTCGCATGAACCAAGTACTAACAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 ATCCTAAGGCTAGATACGGGCTCAACAAGCCTGTTGTTATTCAGCCACCACCGGTGTCTGCACCACCTGTGTCCTTTTCGCATGAACCAAGTACTAACAC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT5G51 CGTCCATGGTTACTATGCAAATAACACAGCTAACCATATCAAGGATCTCTTCTCTTCCCTCCCTGGAGAAGATAGGGAAGAAGATGAGGATGATTTAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 CGTCCATGGTTACTATGCAAATAACACAGCTAACCATATCAAGGATCTCTTCTCTTCCCTCCCTGGAGAAGATAGGGAAGAAGATGAGGATGATTTAGAA 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 AT5G51 GGTGAAGATGATGAAGAATTCGGAGGCCATAGCGAATCTGACACCGAGGTTCCAAGC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 GGTGAAGATGATGAAGAATTCGGAGGCCATAGCGAATCTGACACCGAGGTTCCAAGC 1210 1220 1230 1240 1250 10 20 30 40 50 60 70 80 90 100 AT5G51 MEEREGTNINNIPTSFGLKQHETPLPPPGYPPRSENPNLFPVGQSSTSSAAAAVKPSENVAPPFSLTMPVENSSSELKKKRGRPRKYNPDGSLAVTLSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: RE_093 MEEREGTNINNIPTSFGLKQHETPLPPPGYPPRSENPNLFPVGQSSTSSAAAAVKPSENVAPPFSLTMPVENSSSELKKKGGRPRKYNPDGSLAVTLSPM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G51 PISSSVPLTSEFGSRKRGRGRGRGRGRGRGRGQGQGSREPNNNNNDNNWLKNPQMFEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDVTMKIMTFSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 PISSSVPLTSEFGSRKRGRGRGRGRGRGRGRGQGQGSREPNNNNNDNNWLKNPQMFEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDVTMKIMTFSQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G51 QGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRSRAGGMSVSLAGQDGRVFGGGLAGLFIAAGPVQVMVGSFIAGQEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 QGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRSRAGGMSVSLAGQDGRVFGGGLAGLFIAAGPVQVMVGSFIAGQEES 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G51 QQQQQQIKKQRRERLGIPTTTQASNISFGGSAEDPKARYGLNKPVVIQPPPVSAPPVSFSHEPSTNTVHGYYANNTANHIKDLFSSLPGEDREEDEDDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_093 QQQQQQIKKQRRERLGIPTTTQASNISFGGSAEDPKARYGLNKPVVIQPPPVSAPPVSFSHEPSTNTVHGYYANNTANHIKDLFSSLPGEDREEDEDDLE 310 320 330 340 350 360 370 380 390 400 410 AT5G51 GEDDEEFGGHSESDTEVPS ::::::::::::::::::: RE_093 GEDDEEFGGHSESDTEVPS 410

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