◆◆◆RE_0968 detail◆◆◆

Code name	RE_0968
Locus	AT2G42200
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.20%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0968_1125bp ATGGAGATGGGTTCCAACTCGGGTCCGGGTCATGGTCCGGGTCAGGCAGAGTCGGGTGGTTCCTCCACTGAGTCATCCTCTTTCAGTGGAGGGCTCATGT TTGGCCAGAAGATCTACTTCGAGGACGGTGGTGGTGGATCCGGGTCTTCTTCCTCAGGTGGTCGTTCAAACAGACGTGTCCGTGGAGGCGGGTCGGGTCA GTCGGGTCAGATACCAAGGTGCCAAGTGGAAGGTTGTGGGATGGATCTAACCAATGCAAAAGGTTATTACTCGAGACACCGAGTTTGTGGAGTGCACTCT AAAACACCTAAAGTCACTGTGGCTGGTATCGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTTCATCAGCTTCCGGAATTTGACCTAGAGAAAAGGAGTT GCCGCAGGAGACTCGCTGGTCATAATGAGCGACGAAGGAAGCCACAGCCTGCGTCTCTCTCTGTGTTAGCTTCTCGTTACGGGAGGATCGCACCTTCGCT TTACAAAAATGGTGATGCTGGAATGAATGGAAGCTTTCTTGGGAACCAAGAGATAGGATGGCCAAGTTCAAGAACATTGGATACAAGAGTGATGAGGCGG CCAGTGTCGTCACCGTCATGGCAGATCAATCCAATGAATGTATTTAGTCAAGGTTCAGTTGTTGGAGGAGGGACAAGCTTCTCATCTCCAGAGATTATGG ACACTAAACTAGAGAGCTACAAGGGAATTGGCGACTCAAACTGTGCTCTCTCTCTTCTGTCAAATCCACATCAACCACATGACAACAACAACAACAACAA CAACAACAACAACAACAACAACAATACATGGCGAGCTTCTTCAGGTTTTGGCCCGATGACGGTTACAATGGCTCAACCACCACCTGCACCTAGCCAGCAT CAGTATCTGAACCCGCCTTGGGTATTCAAGGACAATGATAATGATATGTCTCCTGTTTTGAATTTAGGTCGATACACCGAGCCAGATAATTGTCAGATAA GTAGTGGCACGGCAATGGGTGAGTTCGAGTTATCTGATCGCCATCATCAAAGTAGGAGACAGTACATGGAAGATGAGAACACAAGGGCTTATGACTCTTC TTCTCACCATACCAACTGGTCTCTC >RE_0968_translated MEMGSNSGPGHGPGQAESGGSSTESSSFSGGLMFGQKIYFEDGGGGSGSSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHS KTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYKNGDAGMNGSFLGNQEIGWPSSRTLDTRVMRR PVSSPSWQINPMNVFSQGSVVGGGTSFSSPEIMDTKLESYKGIGDSNCALSLLSNPHQPHDNNNNNNNNNNNNNNTWRASSGFGPMTVTMAQPPPAPSQH QYLNPPWVFKDNDNDMSPVLNLGRYTEPDNCQISSGTAMGEFELSDRHHQSRRQYMEDENTRAYDSSSHHTNWSL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1122/1125 (99.7%)（アミノ酸配列で372/375 (99.2%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G42 ATGGAGATGGGTTCCAACTCGGGTCCGGGTCATGGTCCGGGTCAGGCAGAGTCGGGTGGTTCCTCCACTGAGTCATCCTCTTTCAGTGGAGGGCTCATGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 ATGGAGATGGGTTCCAACTCGGGTCCGGGTCATGGTCCGGGTCAGGCAGAGTCGGGTGGTTCCTCCACTGAGTCATCCTCTTTCAGTGGAGGGCTCATGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G42 TTGGCCAGAAGATCTACTTCGAGGACGGTGGTGGTGGATCCGGGTCTTCTTCCTCAGGTGGTCGTTCAAACAGACGTGTCCGTGGAGGCGGGTCGGGTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 TTGGCCAGAAGATCTACTTCGAGGACGGTGGTGGTGGATCCGGGTCTTCTTCCTCAGGTGGTCGTTCAAACAGACGTGTCCGTGGAGGCGGGTCGGGTCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G42 GTCGGGTCAGATACCAAGGTGCCAAGTGGAAGGTTGTGGGATGGATCTAACCAATGCAAAAGGTTATTACTCGAGACACCGAGTTTGTGGAGTGCACTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 GTCGGGTCAGATACCAAGGTGCCAAGTGGAAGGTTGTGGGATGGATCTAACCAATGCAAAAGGTTATTACTCGAGACACCGAGTTTGTGGAGTGCACTCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G42 AAAACACCTAAAGTCACTGTGGCTGGTATCGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTTCATCAGCTTCCGGAATTTGACCTAGAGAAAAGGAGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 AAAACACCTAAAGTCACTGTGGCTGGTATCGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTTCATCAGCTTCCGGAATTTGACCTAGAGAAAAGGAGTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G42 GCCGCAGGAGACTCGCTGGTCATAATGAGCGACGAAGGAAGCCACAGCCTGCGTCTCTCTCTGTGTTAGCTTCTCGTTACGGGAGGATCGCACCTTCGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 GCCGCAGGAGACTCGCTGGTCATAATGAGCGACGAAGGAAGCCACAGCCTGCGTCTCTCTCTGTGTTAGCTTCTCGTTACGGGAGGATCGCACCTTCGCT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G42 TTACGAAAATGGTGATGCTGGAATGAATGGAAGCTTTCTTGGGAACCAAGAGATAGGATGGCCAAGTTCAAGAACATTGGATACAAGAGTGATGAGGCGG :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 TTACAAAAATGGTGATGCTGGAATGAATGGAAGCTTTCTTGGGAACCAAGAGATAGGATGGCCAAGTTCAAGAACATTGGATACAAGAGTGATGAGGCGG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G42 CCAGTGTCGTCACCGTCATGGCAGATCAATCCAATGAATGTATTTAGTCAAGGTTCAGTTGGTGGAGGAGGGACAAGCTTCTCATCTCCAGAGATTATGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: RE_096 CCAGTGTCGTCACCGTCATGGCAGATCAATCCAATGAATGTATTTAGTCAAGGTTCAGTTGTTGGAGGAGGGACAAGCTTCTCATCTCCAGAGATTATGG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G42 ACACTAAACTAGAGAGCTACAAGGGAATTGGCGACTCAAACTGTGCTCTCTCTCTTCTGTCAAATCCACATCAACCACATGACAACAACAACAACAACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 ACACTAAACTAGAGAGCTACAAGGGAATTGGCGACTCAAACTGTGCTCTCTCTCTTCTGTCAAATCCACATCAACCACATGACAACAACAACAACAACAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G42 CAACAACAACAACAACAACAACAATACATGGCGAGCTTCTTCAGGTTTTGGCCCGATGACGGTTACAATGGCTCAACCACCACCTGCACCTAGCCAGCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 CAACAACAACAACAACAACAACAATACATGGCGAGCTTCTTCAGGTTTTGGCCCGATGACGGTTACAATGGCTCAACCACCACCTGCACCTAGCCAGCAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G42 CAGTATCTGAACCCGCCTTGGGTATTCAAGGACAATGATAATGATATGTCTCCTGTTTTGAATTTAGGTCGATACACCGAGCCAGATAATTGTCAGATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 CAGTATCTGAACCCGCCTTGGGTATTCAAGGACAATGATAATGATATGTCTCCTGTTTTGAATTTAGGTCGATACACCGAGCCAGATAATTGTCAGATAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G42 GTAGTGGCACGGCAATGGGTGAGTTCGAGTTATCTGATCACCATCATCAAAGTAGGAGACAGTACATGGAAGATGAGAACACAAGGGCTTATGACTCTTC ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 GTAGTGGCACGGCAATGGGTGAGTTCGAGTTATCTGATCGCCATCATCAAAGTAGGAGACAGTACATGGAAGATGAGAACACAAGGGCTTATGACTCTTC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 AT2G42 TTCTCACCATACCAACTGGTCTCTC ::::::::::::::::::::::::: RE_096 TTCTCACCATACCAACTGGTCTCTC 1110 1120 10 20 30 40 50 60 70 80 90 100 AT2G42 MEMGSNSGPGHGPGQAESGGSSTESSSFSGGLMFGQKIYFEDGGGGSGSSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 MEMGSNSGPGHGPGQAESGGSSTESSSFSGGLMFGQKIYFEDGGGGSGSSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G42 KTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYENGDAGMNGSFLGNQEIGWPSSRTLDTRVMRR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: RE_096 KTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYKNGDAGMNGSFLGNQEIGWPSSRTLDTRVMRR 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G42 PVSSPSWQINPMNVFSQGSVGGGGTSFSSPEIMDTKLESYKGIGDSNCALSLLSNPHQPHDNNNNNNNNNNNNNNTWRASSGFGPMTVTMAQPPPAPSQH :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_096 PVSSPSWQINPMNVFSQGSVVGGGTSFSSPEIMDTKLESYKGIGDSNCALSLLSNPHQPHDNNNNNNNNNNNNNNTWRASSGFGPMTVTMAQPPPAPSQH 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 AT2G42 QYLNPPWVFKDNDNDMSPVLNLGRYTEPDNCQISSGTAMGEFELSDHHHQSRRQYMEDENTRAYDSSSHHTNWSL :::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: RE_096 QYLNPPWVFKDNDNDMSPVLNLGRYTEPDNCQISSGTAMGEFELSDRHHQSRRQYMEDENTRAYDSSSHHTNWSL 310 320 330 340 350 360 370

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