◆◆◆RE_0973 detail◆◆◆

Code name	RE_0973
Locus	AT5G50570
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0973_1077bp ATGGACTGGAATTTCAAACTTAGCTCTGGTTATTTATCTGGATTCGATCAAGAACCAGATTTATCACCAATGGATGGTTCGATCTCGTTTGGTGGGTCGT CACAGTCAAAAGCGGATTTTTCATTTGATCTAAAACTTGGAAGAAACATTGGAAACTCTTCCTCTGTTTTTGGTGATACAGAGCAAGTGATTAGTCTTAG TAAGTGGAAAGATAGTGCTTTAGCTAAACCAGAAGGTTCAAGAAGCTCGAGTTCAAAGAGAACAAGAGGGAATGGTGTTGGAACCAACCAGATGCCGATT TGTCTTGTTGATGGATGTGATTCTGATTTTAGTAATTGTAGAGAGTATCATAAGAGACATAAAGTTTGTGATGTTCATTCAAAAACTCCTGTGGTTACTA TTAATGGTCATAAACAGAGGTTTTGTCAACAATGCAGCAGGTTTCATGCTTTGGAGGAGTTTGATGAAGGGAAGAGAAGTTGTAGGAAACGTCTTGATGG ACATAATCGAAGACGACGGAAGCCGCAGCCTGAACATATCGGTCGTCCTGCCAACTTCTTTACGGGTTTTCAAGGTAGCAAATTGCTAGAGTTTTCTGGT GGTTCACATGTGTTTCCAACTACATCTGTGTTGAACCCGAGCTGGGGAAATAGTCTTGTAAGCGTTGCTGTAGCCGCCAATGGTTCGAGTTATGGGCAGA GCCAGAGCTATGTTGTTGGTTCTTCTCCTGCAAAGACAGGGATAATGTTTCCAATCTCTTCTTCTCCAAACAGTACCAGAAGCATAGCAAAACAATTCCC TTTCTTGCAAGAAGAAGAAAGCTCGAGAACCGCATCGTTGGGTGAGAGAATGACGAGTTGCATCCATGACTCTGATTGTGCTCTCTCTCTTCTGTCATCC TCCTCGTCGTCAGTCCCTCATTTGCTTCAACCACCACTTTCTTTGTCCCAAGAAGCAGTTGAGACAGTTTTTTACGGGTCGGGATTGTTTGAGAATGCGA GTGCAGTCTCTGATGGATCGGTTATATCCGGTAACGAGGCCGTCCGTCTTCCGCAGACATTCCCGTTTCATTGGGAG >RE_0973_translated MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPI CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSG GSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLGERMTSCIHDSDCALSLLSS SSSSVPHLLQPPLSLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHWE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1075/1077 (99.8%)（アミノ酸配列で358/359 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G50 ATGGACTGGAATTTCAAACTTAGCTCTGGTTATTTATCTGGATTCGATCAAGAACCAGATTTATCACCAATGGATGGTTCGATCTCGTTTGGTGGGTCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 ATGGACTGGAATTTCAAACTTAGCTCTGGTTATTTATCTGGATTCGATCAAGAACCAGATTTATCACCAATGGATGGTTCGATCTCGTTTGGTGGGTCGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G50 CACAGTCAAAAGCGGATTTTTCATTTGATCTAAAACTTGGAAGAAACATTGGAAACTCTTCCTCTGTTTTTGGTGATACAGAGCAAGTGATTAGTCTTAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 CACAGTCAAAAGCGGATTTTTCATTTGATCTAAAACTTGGAAGAAACATTGGAAACTCTTCCTCTGTTTTTGGTGATACAGAGCAAGTGATTAGTCTTAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G50 TAAGTGGAAAGATAGTGCTTTAGCTAAACCAGAAGGTTCAAGAAGCTCGAGTTCAAAGAGAACAAGAGGGAATGGTGTTGGAACCAACCAGATGCCGATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 TAAGTGGAAAGATAGTGCTTTAGCTAAACCAGAAGGTTCAAGAAGCTCGAGTTCAAAGAGAACAAGAGGGAATGGTGTTGGAACCAACCAGATGCCGATT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G50 TGTCTTGTTGATGGATGTGATTCTGATTTTAGTAATTGTAGAGAGTATCATAAGAGACATAAAGTTTGTGATGTTCATTCAAAAACTCCTGTGGTTACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 TGTCTTGTTGATGGATGTGATTCTGATTTTAGTAATTGTAGAGAGTATCATAAGAGACATAAAGTTTGTGATGTTCATTCAAAAACTCCTGTGGTTACTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G50 TTAATGGTCATAAACAGAGGTTTTGTCAACAATGCAGCAGGTTTCATGCTTTGGAGGAGTTTGATGAAGGGAAGAGAAGTTGTAGGAAACGTCTTGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 TTAATGGTCATAAACAGAGGTTTTGTCAACAATGCAGCAGGTTTCATGCTTTGGAGGAGTTTGATGAAGGGAAGAGAAGTTGTAGGAAACGTCTTGATGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G50 ACATAATCGAAGACGACGGAAGCCGCAGCCTGAACATATCGGTCGTCCTGCCAACTTCTTTACGGGTTTTCAAGGTAGCAAATTGCTAGAGTTTTCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 ACATAATCGAAGACGACGGAAGCCGCAGCCTGAACATATCGGTCGTCCTGCCAACTTCTTTACGGGTTTTCAAGGTAGCAAATTGCTAGAGTTTTCTGGT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G50 GGTTCACATGTGTTTCCAACTACATCTGTGTTGAACCCGAGCTGGGGAAATAGTCTTGTAAGCGTTGCTGTAGCCGCCAATGGTTCGAGTTATGGGCAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 GGTTCACATGTGTTTCCAACTACATCTGTGTTGAACCCGAGCTGGGGAAATAGTCTTGTAAGCGTTGCTGTAGCCGCCAATGGTTCGAGTTATGGGCAGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G50 GCCAGAGCTATGTTGTTGGTTCTTCTCCTGCAAAGACAGGGATAATGTTTCCAATCTCTTCTTCTCCAAACAGTACCAGAAGCATAGCAAAACAATTCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 GCCAGAGCTATGTTGTTGGTTCTTCTCCTGCAAAGACAGGGATAATGTTTCCAATCTCTTCTTCTCCAAACAGTACCAGAAGCATAGCAAAACAATTCCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G50 TTTCTTGCAAGAAGAAGAAAGCTCGAGAACCGCATCGTTGTGTGAGAGAATGACGAGTTGCATCCATGACTCTGATTGTGCTCTCTCTCTTCTGTCATCC :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 TTTCTTGCAAGAAGAAGAAAGCTCGAGAACCGCATCGTTGGGTGAGAGAATGACGAGTTGCATCCATGACTCTGATTGTGCTCTCTCTCTTCTGTCATCC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G50 TCCTCGTCGTCAGTCCCTCATTTGCTTCAACCACCACTTTCTTTGTCCCAAGAAGCAGTTGAGACAGTTTTTTACGGGTCGGGATTGTTTGAGAATGCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 TCCTCGTCGTCAGTCCCTCATTTGCTTCAACCACCACTTTCTTTGTCCCAAGAAGCAGTTGAGACAGTTTTTTACGGGTCGGGATTGTTTGAGAATGCGA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 AT5G50 GTGCAGTCTCTGATGGATCGGTTATATCCGGTAACGAGGCTGTCCGTCTTCCGCAGACATTCCCGTTTCATTGGGAG :::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: RE_097 GTGCAGTCTCTGATGGATCGGTTATATCCGGTAACGAGGCCGTCCGTCTTCCGCAGACATTCCCGTTTCATTGGGAG 1010 1020 1030 1040 1050 1060 1070 10 20 30 40 50 60 70 80 90 100 AT5G50 MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 MDWNFKLSSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G50 CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G50 GSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: RE_097 GSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEEESSRTASLGERMTSCIHDSDCALSLLSS 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT5G50 SSSSVPHLLQPPLSLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHWE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_097 SSSSVPHLLQPPLSLSQEAVETVFYGSGLFENASAVSDGSVISGNEAVRLPQTFPFHWE 310 320 330 340 350

このページのTOPに戻る