◆◆◆RE_0988 detail◆◆◆

Code name	RE_0988
Locus	AT1G35560
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_0988_1023bp ATGGAGTCCCACAACAACAACCAGAGCAACAACAACACCACTGGTTCGGCCCATCTGGTCCCATCCATGGGACCAATCTCCGGTTCAGTCTCATTAACCA CCACTGCTCCAAACTCCACTACCACCACCGTCACCGCCGCTAAAACACCCGCAAAACGACCGTCCAAGGACCGTCACATCAAAGTAGACGGACGTGGCCG GAGGATACGTATGCCGGCTATCTGCGCAGCACGTGTCTTCCAACTAACACGTGAGTTACAACACAAATCGGACGGCGAGACTATAGAGTGGCTGCTCCAA CAAGCGGAGCCAGCTATCATCGCAGCCACCGGAACTGGAACCATACCGGCGAATATCTCTACTTTGAACATCTCTCTTCGAAGCAGTGGCTCTACTCTTT CAGCTCCACTGTCTAAATCTTTCCACATGGGAAGAGCGGCTCAAAACGCTGCCGTTTTTGGGTTCCAGCAACAGCTTTATCATCCTCATCATATCACGAC AGATTCTTCTTCTTCTTCTCTTCCCAAAACATTCCGTGAAGAAGATCTTTTTAAAGATCCTAATTTTCTAGATCAAGAACCCGGTTCAAGATCACCTAAA CCGGGATCCGAAGCTCCTGATCAAGATCCGGGTTCGACCCGGTCAAGAACACAAAATATGATACCGCCGATGTGGGCACTAGCGCCAACGCCAGCCTCCA CAAACGGAGGTAGTGCTTTTTGGATGTTACCAGTCGGAGGAGGAGGAGGTCCGGCTAACGTTCAGGATCCATCACAGCACATGTGGGCGTTTAATCCGGG TCATTACCCGGGTCGAATCGGGTCGGTTCAGCTAGGGTCTATGTTAGTGGGAGGTCAACAGTTAGGGTTAGGTGTTGCAGAAAATAACAATTCGGGGCTA TTTTCCGGCGGAGGAGGAGACGGTGGTCGGGTTGGTCTCGGAATGAGTCTTGAGCAAAAGCCTCAACATCAAGTGAGTGATCATGCTACTAGAGACCAAA ATCCTACTATAGATGGTTCTCCT >RE_0988_translated MESHNNNQSNNNTTGSAHLVPSMGPISGSVSLTTTAPNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQ QAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAPLSKSFHMGRAAQNAAVFGFQQQLYHPHHITTDSSSSSLPKTFREEDLFKDPNFLDQEPGSRSPK PGSEAPDQDPGSTRSRTQNMIPPMWALAPTPASTNGGSAFWMLPVGGGGGPANVQDPSQHMWAFNPGHYPGRIGSVQLGSMLVGGQQLGLGVAENNNSGL FSGGGGDGGRVGLGMSLEQKPQHQVSDHATRDQNPTIDGSP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1022/1023 (99.9%)（アミノ酸配列で340/341 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G35 ATGGAGTCCCACAACAACAACCAGAGCAACAACAACACCACTGGTTCGGCCCATCTGGTCCCATCCATGGGACCAATCTCCGGTTCAGTCTCATTAACCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 ATGGAGTCCCACAACAACAACCAGAGCAACAACAACACCACTGGTTCGGCCCATCTGGTCCCATCCATGGGACCAATCTCCGGTTCAGTCTCATTAACCA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G35 CCACTGCTCCAAACTCCACTACCACCACCGTCACCGCCGCTAAAACACCCGCAAAACGACCGTCCAAGGACCGTCACATCAAAGTAGACGGACGTGGCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 CCACTGCTCCAAACTCCACTACCACCACCGTCACCGCCGCTAAAACACCCGCAAAACGACCGTCCAAGGACCGTCACATCAAAGTAGACGGACGTGGCCG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G35 GAGGATACGTATGCCGGCTATCTGCGCAGCACGTGTCTTCCAACTAACACGTGAGTTACAACACAAATCGGACGGCGAGACTATAGAGTGGCTGCTCCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 GAGGATACGTATGCCGGCTATCTGCGCAGCACGTGTCTTCCAACTAACACGTGAGTTACAACACAAATCGGACGGCGAGACTATAGAGTGGCTGCTCCAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G35 CAAGCGGAGCCAGCTATCATCGCAGCCACCGGAACTGGAACCATACCGGCGAATATCTCTACTTTGAACATCTCTCTTCGAAGCAGTGGCTCTACTCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 CAAGCGGAGCCAGCTATCATCGCAGCCACCGGAACTGGAACCATACCGGCGAATATCTCTACTTTGAACATCTCTCTTCGAAGCAGTGGCTCTACTCTTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G35 CAGCTCCACTGTCTAAATCTTTCCACATGGGAAGAGCGGCTCAAAACGCTGCCGTTTTTGGGTTCCAGCAACAGCTTTATCATCCTCATCATATCACGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 CAGCTCCACTGTCTAAATCTTTCCACATGGGAAGAGCGGCTCAAAACGCTGCCGTTTTTGGGTTCCAGCAACAGCTTTATCATCCTCATCATATCACGAC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G35 AGATTCTTCTTCTTCTTCTCTTCCCAAAACATTCCGTGAAGAAGATCTTTTTAAAGATCCTAATTTTCTAGATCAAGAACCCGGTTCAAGATCACCTAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 AGATTCTTCTTCTTCTTCTCTTCCCAAAACATTCCGTGAAGAAGATCTTTTTAAAGATCCTAATTTTCTAGATCAAGAACCCGGTTCAAGATCACCTAAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G35 CCGGGATCCGAAGCTCCTGATCAAGATCCGGGTTCGACCCGGTCAAGAACACAAAATATGATACCGCCGATGTGGGCACTAGCGCCAACGCCAGCCTCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 CCGGGATCCGAAGCTCCTGATCAAGATCCGGGTTCGACCCGGTCAAGAACACAAAATATGATACCGCCGATGTGGGCACTAGCGCCAACGCCAGCCTCCA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G35 CAAACGGAGGTAGTGCTTTTTGGATGTTACCAGTCGGAGGAGGAGGAGGTCCGGCTAACGTTCAGGATCCATCACAGCACATGTGGGCGTTTAATCCGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 CAAACGGAGGTAGTGCTTTTTGGATGTTACCAGTCGGAGGAGGAGGAGGTCCGGCTAACGTTCAGGATCCATCACAGCACATGTGGGCGTTTAATCCGGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G35 TCATTACCCGGGTCGAATCGGGTCGGTTCAGCTAGGGTCTATGTTAGTGGGAGGTCAACAGTTAGGGTTAGGTGTTGCAGAAAATAACAATTTGGGGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: RE_098 TCATTACCCGGGTCGAATCGGGTCGGTTCAGCTAGGGTCTATGTTAGTGGGAGGTCAACAGTTAGGGTTAGGTGTTGCAGAAAATAACAATTCGGGGCTA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G35 TTTTCCGGCGGAGGAGGAGACGGTGGTCGGGTTGGTCTCGGAATGAGTCTTGAGCAAAAGCCTCAACATCAAGTGAGTGATCATGCTACTAGAGACCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 TTTTCCGGCGGAGGAGGAGACGGTGGTCGGGTTGGTCTCGGAATGAGTCTTGAGCAAAAGCCTCAACATCAAGTGAGTGATCATGCTACTAGAGACCAAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 AT1G35 ATCCTACTATAGATGGTTCTCCT ::::::::::::::::::::::: RE_098 ATCCTACTATAGATGGTTCTCCT 1010 1020 10 20 30 40 50 60 70 80 90 100 AT1G35 MESHNNNQSNNNTTGSAHLVPSMGPISGSVSLTTTAPNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 MESHNNNQSNNNTTGSAHLVPSMGPISGSVSLTTTAPNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G35 QAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAPLSKSFHMGRAAQNAAVFGFQQQLYHPHHITTDSSSSSLPKTFREEDLFKDPNFLDQEPGSRSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_098 QAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAPLSKSFHMGRAAQNAAVFGFQQQLYHPHHITTDSSSSSLPKTFREEDLFKDPNFLDQEPGSRSPK 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G35 PGSEAPDQDPGSTRSRTQNMIPPMWALAPTPASTNGGSAFWMLPVGGGGGPANVQDPSQHMWAFNPGHYPGRIGSVQLGSMLVGGQQLGLGVAENNNLGL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: RE_098 PGSEAPDQDPGSTRSRTQNMIPPMWALAPTPASTNGGSAFWMLPVGGGGGPANVQDPSQHMWAFNPGHYPGRIGSVQLGSMLVGGQQLGLGVAENNNSGL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT1G35 FSGGGGDGGRVGLGMSLEQKPQHQVSDHATRDQNPTIDGSP ::::::::::::::::::::::::::::::::::::::::: RE_098 FSGGGGDGGRVGLGMSLEQKPQHQVSDHATRDQNPTIDGSP 310 320 330 340

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