◆◆◆RE_0993 detail◆◆◆

Code name	RE_0993
Locus	AT1G72010
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0520_20080115_0993_FRW1_555
sequence	>RE_0993_1125bp ATGAATCAGAATTCCTCTGTTGCGGAGGCGACGCTTCAGCTTAATTCCGGTGAAAAACCATCGCCGGGATCGATTCCGTTTATCTCCTCTGGTCAACACG GAAACATAAGCACTTCAGCGACGAGTTCGACAAGCACAAGCTCAGGTAGTGCTCTTGCCGTAGTTAAATCCGCCGTGAAAAAACCAACTAAAGATCGGCA TACTAAAGTCGATGGTCGTGGACGGCGAATTCGTATGCCGGCGATGTGCGCCGCTAGAGTTTTTCAGTTAACAAGAGAGTTAGGTCATAAATCTGATGGA GAAACCATCGAGTGGCTTCTCCAACAAGCTGAGCCAGCTATCATCGCTTCTACTGGTACTGGTACGATCCCGGCGAATTTCTCAACACTTAACGCTTCTT TACGCAGTGGTGGTGGCTCCACCTTGTTTTCTCAGGCGTCGAAATCTTCTTCTTCGCCACTCTCGTTTCATAGCACTGGAATGTCTCTTTATGAAGACAA TAACGGTGCTAACGGATCATCGGTAGATCCTTCTAGGAAGTTACTGAATTCAGCCGCAAACGCGGCTGTTTTCGGTTTTCATCATCAGATGTATCCACCA ATAATGTCGACGGAGAGAAATCCGAACACTTTAGTGAAACCTTATAGAGAAGATTACTTTAAGGAGCCGAGTTCTGCAGCGGAACCAAGCGAGAGTTCTC AGAAAGCGAGTCAGTTTCAGGAGCAAGAGTTAGCTCAGGGTCGTGGGACGGCTAATGTGGTGCCTCAACCTATGTGGGCGGTTGCGCCAGGGACTACGAA TGGAGGTAGTGCGTTCTGGATGCTTCCGATGAGCGGTTCGGGTGGGCGGGAGCAGATGCAGCAGCAGCCTGGTCACCAAATGTGGGCGTTTAATCCAGGG AATTATCCAGTTGGGACAGGACGAGTAGTAACTGCACCAATGGGGTCAATGATGTTGGGAGGTCAACAGCTAGGATTAGGAGTGGCAGAGGGCAACATGG CGGCTGCAATGCGTGGCAGTAGAGGCGATGGTTTGGCCATGACTCTAGATCAACATCAGCATCAGCTCCAACATCAAGAGCCAAACCAGAGTCAAGCTAG TGAAAATGGTGGTGATGACAAAAAG >RE_0993_translated MNQNSSVAEATLQLNSGEKPSPGSIPFISSGQHGNISTSATSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSSPLSFHSTGMSLYEDNNGANGSSVDPSRKLLNSAANAAVFGFHHQMYPP IMSTERNPNTLVKPYREDYFKEPSSAAEPSESSQKASQFQEQELAQGRGTANVVPQPMWAVAPGTTNGGSAFWMLPMSGSGGREQMQQQPGHQMWAFNPG NYPVGTGRVVTAPMGSMMLGGQQLGLGVAEGNMAAAMRGSRGDGLAMTLDQHQHQLQHQEPNQSQASENGGDDKK
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1124/1125 (99.9%)（アミノ酸配列で374/375 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G72 ATGAATCAGAATTCCTCTGTTGCGGAGGCGACGCTTCAGCTTAATTCCGGTGAAAAACCATCGCCGGGATCGATTCCGTTTATCTCCTCTGGTCAACACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 ATGAATCAGAATTCCTCTGTTGCGGAGGCGACGCTTCAGCTTAATTCCGGTGAAAAACCATCGCCGGGATCGATTCCGTTTATCTCCTCTGGTCAACACG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G72 GAAACATAAGCACTTCAGCGACGAGTTCGACAAGCACAAGCTCAGGTAGTGCTCTTGCCGTAGTTAAATCCGCCGTGAAAAAACCAACTAAAGATCGGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GAAACATAAGCACTTCAGCGACGAGTTCGACAAGCACAAGCTCAGGTAGTGCTCTTGCCGTAGTTAAATCCGCCGTGAAAAAACCAACTAAAGATCGGCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G72 TACTAAAGTCGATGGTCGTGGACGGCGAATTCGTATGCCGGCGATGTGCGCCGCTAGAGTTTTTCAGTTAACAAGAGAGTTAGGTCATAAATCTGATGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TACTAAAGTCGATGGTCGTGGACGGCGAATTCGTATGCCGGCGATGTGCGCCGCTAGAGTTTTTCAGTTAACAAGAGAGTTAGGTCATAAATCTGATGGA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G72 GAAACCATCGAGTGGCTTCTCCAACAAGCTGAGCCAGCTATCATCGCTTCTACTGGTACTGGTACGATCCCGGCGAATTTCTCAACACTTAACGCTTCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GAAACCATCGAGTGGCTTCTCCAACAAGCTGAGCCAGCTATCATCGCTTCTACTGGTACTGGTACGATCCCGGCGAATTTCTCAACACTTAACGCTTCTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G72 TACGCAGTGGTGGTGGCTCCACCTTGTTTTCTCAGGCGTCGAAATCTTCTTCTTCGCCACTCTCGTTTCATAGCACTGGAATGTCTCTTTATGAAGACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TACGCAGTGGTGGTGGCTCCACCTTGTTTTCTCAGGCGTCGAAATCTTCTTCTTCGCCACTCTCGTTTCATAGCACTGGAATGTCTCTTTATGAAGACAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G72 TAACGGTACTAACGGATCATCGGTAGATCCTTCTAGGAAGTTACTGAATTCAGCCGCAAACGCGGCTGTTTTCGGTTTTCATCATCAGATGTATCCACCA ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TAACGGTGCTAACGGATCATCGGTAGATCCTTCTAGGAAGTTACTGAATTCAGCCGCAAACGCGGCTGTTTTCGGTTTTCATCATCAGATGTATCCACCA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G72 ATAATGTCGACGGAGAGAAATCCGAACACTTTAGTGAAACCTTATAGAGAAGATTACTTTAAGGAGCCGAGTTCTGCAGCGGAACCAAGCGAGAGTTCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 ATAATGTCGACGGAGAGAAATCCGAACACTTTAGTGAAACCTTATAGAGAAGATTACTTTAAGGAGCCGAGTTCTGCAGCGGAACCAAGCGAGAGTTCTC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G72 AGAAAGCGAGTCAGTTTCAGGAGCAAGAGTTAGCTCAGGGTCGTGGGACGGCTAATGTGGTGCCTCAACCTATGTGGGCGGTTGCGCCAGGGACTACGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 AGAAAGCGAGTCAGTTTCAGGAGCAAGAGTTAGCTCAGGGTCGTGGGACGGCTAATGTGGTGCCTCAACCTATGTGGGCGGTTGCGCCAGGGACTACGAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G72 TGGAGGTAGTGCGTTCTGGATGCTTCCGATGAGCGGTTCGGGTGGGCGGGAGCAGATGCAGCAGCAGCCTGGTCACCAAATGTGGGCGTTTAATCCAGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TGGAGGTAGTGCGTTCTGGATGCTTCCGATGAGCGGTTCGGGTGGGCGGGAGCAGATGCAGCAGCAGCCTGGTCACCAAATGTGGGCGTTTAATCCAGGG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G72 AATTATCCAGTTGGGACAGGACGAGTAGTAACTGCACCAATGGGGTCAATGATGTTGGGAGGTCAACAGCTAGGATTAGGAGTGGCAGAGGGCAACATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 AATTATCCAGTTGGGACAGGACGAGTAGTAACTGCACCAATGGGGTCAATGATGTTGGGAGGTCAACAGCTAGGATTAGGAGTGGCAGAGGGCAACATGG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G72 CGGCTGCAATGCGTGGCAGTAGAGGCGATGGTTTGGCCATGACTCTAGATCAACATCAGCATCAGCTCCAACATCAAGAGCCAAACCAGAGTCAAGCTAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CGGCTGCAATGCGTGGCAGTAGAGGCGATGGTTTGGCCATGACTCTAGATCAACATCAGCATCAGCTCCAACATCAAGAGCCAAACCAGAGTCAAGCTAG 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 AT1G72 TGAAAATGGTGGTGATGACAAAAAG ::::::::::::::::::::::::: RE_099 TGAAAATGGTGGTGATGACAAAAAG 1110 1120 10 20 30 40 50 60 70 80 90 100 AT1G72 MNQNSSVAEATLQLNSGEKPSPGSIPFISSGQHGNISTSATSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 MNQNSSVAEATLQLNSGEKPSPGSIPFISSGQHGNISTSATSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G72 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSSPLSFHSTGMSLYEDNNGTNGSSVDPSRKLLNSAANAAVFGFHHQMYPP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: RE_099 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSSPLSFHSTGMSLYEDNNGANGSSVDPSRKLLNSAANAAVFGFHHQMYPP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G72 IMSTERNPNTLVKPYREDYFKEPSSAAEPSESSQKASQFQEQELAQGRGTANVVPQPMWAVAPGTTNGGSAFWMLPMSGSGGREQMQQQPGHQMWAFNPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 IMSTERNPNTLVKPYREDYFKEPSSAAEPSESSQKASQFQEQELAQGRGTANVVPQPMWAVAPGTTNGGSAFWMLPMSGSGGREQMQQQPGHQMWAFNPG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 AT1G72 NYPVGTGRVVTAPMGSMMLGGQQLGLGVAEGNMAAAMRGSRGDGLAMTLDQHQHQLQHQEPNQSQASENGGDDKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 NYPVGTGRVVTAPMGSMMLGGQQLGLGVAEGNMAAAMRGSRGDGLAMTLDQHQHQLQHQEPNQSQASENGGDDKK 310 320 330 340 350 360 370

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