◆◆◆RE_0996 detail◆◆◆

Code name	RE_0996
Locus	AT2G45680
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0520_20080115_0996_FRW1W2_5555
sequence	>RE_0996_1068bp ATGGCGACAATTCAGAAGCTTGAAGAAGTTGCAGGCAAAGATCAAACTCTAAGAGCCGTTGATCTAACCATCATCAACGGCGTCAGAAACGTCGAAACTT CAAGACCTTTCCAAGTAAATCCCACAGTGAGTCTCGAGCCCAAGGCGGAGCCGGTGATGCCGTCGTTTTCAATGTCTTTAGCTCCACCGTCTTCGACAGG ACCACCATTGAAGAGAGCTTCGACTAAAGACCGTCACACGAAGGTTGAAGGAAGAGGGAGAAGGATACGGATGCCTGCCACGTGTGCGGCTAGGATTTTT CAATTAACTCGAGAGTTAGGTCACAAATCCGACGGCGAAACGATTCGGTGGTTGTTGGAGAACGCTGAGCCGGCGATTATAGCCGCCACGGGTACGGGAA CGGTTCCCGCCATCGCCATGTCGGTTAACGGAACCTTAAAAATCCCGACGACGACCAACGCTGATTCTGATATGGGTGAAAATCTGATGAAGAAGAAACG TAAACGACCTTCTAACAGTGAGTATATAGACATAAGCGACGCCGTTTCAGCTTCCTCCGGTTTAGCTCCAATTGCCACGACGACAACGATCCAACCTCCG CAAGCTCTGGCATCATCCACTGTGGCTCAACAACTTCTGCCGCAAGGAATGTATCCGATGTGGGCTATTCCATCAAACGCAATGATTCCGACGGTCGGAG CTTTCTTCTTGATTCCACAAATCGCTGGTCCGTCGAATCAGCCTCAGTTATTAGCTTTTCCCGCCGCCGCTGCTTCGCCGTCGTCTTACGTCGCCGCTGT TCAACAGGCTTCCACGATGGCTAGACCACCTCCTTTACAAGTTGTTCCAAGCAGCGGCTTTGTATCCGTTTCAGACGTTAGCGGTTCGAATTTATCAAGA GCGACGTCGGTTATGGCTCCGAGCTCAAGCTCAGGCGTAACAACCGGTAGTTCATCGTCAATTGCAACAACAACGACGCACACGCTGAGAGACTTCTCCC TAGAGATATACGAGAAACAAGAGCTTCACCAGTTCATGAGCACCACAACAGCACGGTCATCGAACCAC >RE_0996_translated MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSRPFQVNPTVSLEPKAEPVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIF QLTRELGHKSDGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMGENLMKKKRKRPSNSEYIDISDAVSASSGLAPIATTTTIQPP QALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDVSGSNLSR ATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTTARSSNH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1066/1068 (99.8%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G45 ATGGCGACAATTCAGAAGCTTGAAGAAGTTGCAGGCAAAGATCAAACTCTAAGAGCCGTTGATCTAACCATCATCAACGGCGTCAGAAACGTCGAAACTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 ATGGCGACAATTCAGAAGCTTGAAGAAGTTGCAGGCAAAGATCAAACTCTAAGAGCCGTTGATCTAACCATCATCAACGGCGTCAGAAACGTCGAAACTT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G45 CAAGACCTTTCCAAGTAAATCCCACAGTGAGTCTCGAGCCCAAGGCGGAGCCGGTGATGCCGTCGTTTTCAATGTCTTTAGCTCCACCGTCTTCGACAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CAAGACCTTTCCAAGTAAATCCCACAGTGAGTCTCGAGCCCAAGGCGGAGCCGGTGATGCCGTCGTTTTCAATGTCTTTAGCTCCACCGTCTTCGACAGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G45 ACCACCATTGAAGAGAGCTTCGACTAAAGACCGTCACACGAAGGTTGAAGGAAGAGGGAGAAGGATACGGATGCCTGCCACGTGTGCGGCTAGGATTTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 ACCACCATTGAAGAGAGCTTCGACTAAAGACCGTCACACGAAGGTTGAAGGAAGAGGGAGAAGGATACGGATGCCTGCCACGTGTGCGGCTAGGATTTTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G45 CAATTAACTCGAGAGTTAGGTCACAAATCCGACGGCGAAACGATTCGGTGGTTGTTGGAGAACGCTGAGCCGGCGATTATAGCCGCCACGGGTACGGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CAATTAACTCGAGAGTTAGGTCACAAATCCGACGGCGAAACGATTCGGTGGTTGTTGGAGAACGCTGAGCCGGCGATTATAGCCGCCACGGGTACGGGAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G45 CGGTTCCCGCCATCGCCATGTCGGTTAACGGAACCTTAAAAATCCCGACGACGACGAACGCTGATTCTGATATGGGTGAAAATCTGATGAAGAAGAAACG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: RE_099 CGGTTCCCGCCATCGCCATGTCGGTTAACGGAACCTTAAAAATCCCGACGACGACCAACGCTGATTCTGATATGGGTGAAAATCTGATGAAGAAGAAACG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G45 TAAACGACCTTCTAACAGTGAGTATATAGACATAAGCGACGCCGTTTCAGCTTCCTCCGGTTTAGCTCCAATTGCCACGACGACAACGATCCAACCTCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TAAACGACCTTCTAACAGTGAGTATATAGACATAAGCGACGCCGTTTCAGCTTCCTCCGGTTTAGCTCCAATTGCCACGACGACAACGATCCAACCTCCG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G45 CAAGCTCTGGCATCATCCACTGTGGCTCAGCAACTTCTGCCGCAAGGAATGTATCCGATGTGGGCTATTCCATCAAACGCAATGATTCCGACGGTCGGAG ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CAAGCTCTGGCATCATCCACTGTGGCTCAACAACTTCTGCCGCAAGGAATGTATCCGATGTGGGCTATTCCATCAAACGCAATGATTCCGACGGTCGGAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G45 CTTTCTTCTTGATTCCACAAATCGCTGGTCCGTCGAATCAGCCTCAGTTATTAGCTTTTCCCGCCGCCGCTGCTTCGCCGTCGTCTTACGTCGCCGCTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CTTTCTTCTTGATTCCACAAATCGCTGGTCCGTCGAATCAGCCTCAGTTATTAGCTTTTCCCGCCGCCGCTGCTTCGCCGTCGTCTTACGTCGCCGCTGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G45 TCAACAGGCTTCCACGATGGCTAGACCACCTCCTTTACAAGTTGTTCCAAGCAGCGGCTTTGTATCCGTTTCAGACGTTAGCGGTTCGAATTTATCAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TCAACAGGCTTCCACGATGGCTAGACCACCTCCTTTACAAGTTGTTCCAAGCAGCGGCTTTGTATCCGTTTCAGACGTTAGCGGTTCGAATTTATCAAGA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G45 GCGACGTCGGTTATGGCTCCGAGCTCAAGCTCAGGCGTAACAACCGGTAGTTCATCGTCAATTGCAACAACAACGACGCACACGCTGAGAGACTTCTCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GCGACGTCGGTTATGGCTCCGAGCTCAAGCTCAGGCGTAACAACCGGTAGTTCATCGTCAATTGCAACAACAACGACGCACACGCTGAGAGACTTCTCCC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 AT2G45 TAGAGATATACGAGAAACAAGAGCTTCACCAGTTCATGAGCACCACAACAGCACGGTCATCGAACCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TAGAGATATACGAGAAACAAGAGCTTCACCAGTTCATGAGCACCACAACAGCACGGTCATCGAACCAC 1010 1020 1030 1040 1050 1060 10 20 30 40 50 60 70 80 90 100 AT2G45 MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSRPFQVNPTVSLEPKAEPVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSRPFQVNPTVSLEPKAEPVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIF 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G45 QLTRELGHKSDGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMGENLMKKKRKRPSNSEYIDISDAVSASSGLAPIATTTTIQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 QLTRELGHKSDGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMGENLMKKKRKRPSNSEYIDISDAVSASSGLAPIATTTTIQPP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G45 QALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDVSGSNLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 QALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDVSGSNLSR 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT2G45 ATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTTARSSNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 ATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTTARSSNH 310 320 330 340 350

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