◆◆◆RE_0998 detail◆◆◆

Code name	RE_0998
Locus	AT3G15030
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	(manual:998_1F/998_1_ re_SEQ080422/0708_20080115_0998W1)
sequence	>RE_0998_1260bp ATGTCTGACGACCAATTCCATCACCCGCCGCCTCCTTCTTCAATGAGGCACCGTTCTACGTCGGATGCGGCGGACGGCGGCTGCGGCGAGATTGTTGAGG TGCAAGGTGGTCACATTGTTCGGTCTACCGGAAGAAAAGACCGCCACAGCAAAGTCTGCACGGCTAAAGGGCCACGTGACCGGCGCGTGAGACTCTCTGC TCACACGGCGATTCAGTTTTACGATGTTCAAGACAGGCTTGGTTTCGACCGACCTAGCAAAGCCGTTGATTGGCTTATCAAAAAGGCTAAGACTTCCATT GACGAGCTCGCTGAGCTTCCTCCCTGGAATCCCGCCGATGCAATTCGCCTAGCCGCTGCTAACGCTAAACCCAGAAGAACCACCGCCAAAACCCAAATCT CTCCGTCTCCGCCACCGCCGCAACAGCAACAACAACAACAACAGCTTCAGTTCGGTGTTGGCTTCAACGGAGGAGGAGCAGAGCATCCGAGTAACAACGA GTCGAGTTTTCTCCCGCCGTCAATGGATTCAGATTCGATAGCTGACACTATAAAGTCGTTTTTTCCGGTGATTGGCTCTTCAACGGAGGCTCCTTCGAAT CATAACCTTATGCACAACTATCATCATCAGCATCCGCCGGATTTGCTTTCTCGAACTAATAGCCAAAACCAAGATCTCCGTCTCTCGCTGCAATCGTTCC CGGATGGTCCACCGTCGCTTCTGCACCACCAACATCACCACCACACCTCTGCTTCCGCCTCCGAGCCTACTCTGTTCTACGGACAGAGCAATCCGTTAGG GTTTGACACATCGAGTTGGGAGCAGCAGTCGTCGGAATTCGGAAGGATTCAGAGACTAGTGGCTTGGAACAGCGGCGGTGGCGGCGGAGCAACCGATACA GGAAACGGAGGAGGGTTTCTGTTCGCTCCTCCTACTCCTTCAACGACGTCGTTTCAGCCAGTTCTTGGCCAAAGCCAACAGCTTTATTCTCAGAGGGGTC CCCTTCAGTCCAGTTACAGTCCCATGATCCGTGCTTGGTTTGATCCTCACCATCATCACCAATCCATCTCCACCGACGATCTCAACCACCACCATCACCT TCCTCCACCGGTTCACCAATCAGCAATCCCCGGAATCGGATTCGCCTCAGGTGAATTCTCTTCGGGTTTTCGCATACCAGCACGGTTTCACGGCCAAGAA GAGGAGCAGCACGACGGTCTCACTCACAAGCCGTCCTCTGCTTCCTCTATTTCTCGCCAT >RE_0998_translated MSDDQFHHPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSI DELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSN HNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQSNPLGFDTSSWEQQSSEFGRIQRLVAWNSGGGGGATDT GNGGGFLFAPPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGFASGEFSSGFRIPARFHGQE EEQHDGLTHKPSSASSISRH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1259/1260 (99.9%)（アミノ酸配列で419/420 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G15 ATGTCTGACGACCAATTCCATCACCCGCCGCCTCCTTCTTCAATGAGGCACCGTTCTACGTCGGATGCGGCGGACGGCGGCTGCGGCGAGATTGTTGAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 ATGTCTGACGACCAATTCCATCACCCGCCGCCTCCTTCTTCAATGAGGCACCGTTCTACGTCGGATGCGGCGGACGGCGGCTGCGGCGAGATTGTTGAGG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G15 TGCAAGGTGGTCACATTGTTCGGTCTACCGGAAGAAAAGACCGCCACAGCAAAGTCTGCACGGCTAAAGGGCCACGTGACCGGCGCGTGAGACTCTCTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TGCAAGGTGGTCACATTGTTCGGTCTACCGGAAGAAAAGACCGCCACAGCAAAGTCTGCACGGCTAAAGGGCCACGTGACCGGCGCGTGAGACTCTCTGC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G15 TCACACGGCGATTCAGTTTTACGATGTTCAAGACAGGCTTGGTTTCGACCGACCTAGCAAAGCCGTTGATTGGCTTATCAAAAAGGCTAAGACTTCCATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 TCACACGGCGATTCAGTTTTACGATGTTCAAGACAGGCTTGGTTTCGACCGACCTAGCAAAGCCGTTGATTGGCTTATCAAAAAGGCTAAGACTTCCATT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G15 GACGAGCTCGCTGAGCTTCCTCCCTGGAATCCCGCCGATGCAATTCGCCTAGCCGCTGCTAACGCTAAACCCAGAAGAACCACCGCCAAAACCCAAATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GACGAGCTCGCTGAGCTTCCTCCCTGGAATCCCGCCGATGCAATTCGCCTAGCCGCTGCTAACGCTAAACCCAGAAGAACCACCGCCAAAACCCAAATCT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G15 CTCCGTCTCCGCCACCGCCGCAACAGCAACAACAACAACAACAGCTTCAGTTCGGTGTTGGCTTCAACGGAGGAGGAGCAGAGCATCCGAGTAACAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CTCCGTCTCCGCCACCGCCGCAACAGCAACAACAACAACAACAGCTTCAGTTCGGTGTTGGCTTCAACGGAGGAGGAGCAGAGCATCCGAGTAACAACGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G15 GTCGAGTTTTCTCCCGCCGTCAATGGATTCAGATTCGATAGCTGACACTATAAAGTCGTTTTTTCCGGTGATTGGCTCTTCAACGGAGGCTCCTTCGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GTCGAGTTTTCTCCCGCCGTCAATGGATTCAGATTCGATAGCTGACACTATAAAGTCGTTTTTTCCGGTGATTGGCTCTTCAACGGAGGCTCCTTCGAAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G15 CATAACCTTATGCACAACTATCATCATCAGCATCCGCCGGATTTGCTTTCTCGAACTAATAGCCAAAACCAAGATCTCCGTCTCTCGCTGCAATCGTTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CATAACCTTATGCACAACTATCATCATCAGCATCCGCCGGATTTGCTTTCTCGAACTAATAGCCAAAACCAAGATCTCCGTCTCTCGCTGCAATCGTTCC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G15 CGGATGGTCCACCGTCGCTTCTGCACCACCAACATCACCACCACACCTCTGCTTCCGCCTCCGAGCCTACTCTGTTCTACGGACAGAGCAATCCGTTAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CGGATGGTCCACCGTCGCTTCTGCACCACCAACATCACCACCACACCTCTGCTTCCGCCTCCGAGCCTACTCTGTTCTACGGACAGAGCAATCCGTTAGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G15 GTTTGACACATCGAGTTGGGAGCAGCAGTCGTCGGAATTCGGAAGGATTCAGAGACTAGTGGCTTGGAACAGCGGCGGTGGCGGCGGAGCAACCGATACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GTTTGACACATCGAGTTGGGAGCAGCAGTCGTCGGAATTCGGAAGGATTCAGAGACTAGTGGCTTGGAACAGCGGCGGTGGCGGCGGAGCAACCGATACA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G15 GGAAACGGAGGAGGGTTTCTGTTCGCTCCTCCTACTCCTTCAACGACGTCGTTTCAGCCAGTTCTTGGCCAAAGCCAACAGCTTTATTCTCAGAGGGGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GGAAACGGAGGAGGGTTTCTGTTCGCTCCTCCTACTCCTTCAACGACGTCGTTTCAGCCAGTTCTTGGCCAAAGCCAACAGCTTTATTCTCAGAGGGGTC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G15 CCCTTCAGTCCAGTTACAGTCCCATGATCCGTGCTTGGTTTGATCCTCACCATCATCACCAATCCATCTCCACCGACGATCTCAACCACCACCATCACCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 CCCTTCAGTCCAGTTACAGTCCCATGATCCGTGCTTGGTTTGATCCTCACCATCATCACCAATCCATCTCCACCGACGATCTCAACCACCACCATCACCT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT3G15 TCCTCCACCGGTTCACCAATCAGCAATCCCCGGAATCGGATTCGCCTCAGGTGAATTCTCTTCGGGTTTTCGCATACCAGCACGGTTTCAGGGCCAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: RE_099 TCCTCCACCGGTTCACCAATCAGCAATCCCCGGAATCGGATTCGCCTCAGGTGAATTCTCTTCGGGTTTTCGCATACCAGCACGGTTTCACGGCCAAGAA 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 AT3G15 GAGGAGCAGCACGACGGTCTCACTCACAAGCCGTCCTCTGCTTCCTCTATTTCTCGCCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 GAGGAGCAGCACGACGGTCTCACTCACAAGCCGTCCTCTGCTTCCTCTATTTCTCGCCAT 1210 1220 1230 1240 1250 1260 10 20 30 40 50 60 70 80 90 100 AT3G15 MSDDQFHHPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 MSDDQFHHPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G15 DELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 DELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSN 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G15 HNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQSNPLGFDTSSWEQQSSEFGRIQRLVAWNSGGGGGATDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_099 HNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQSNPLGFDTSSWEQQSSEFGRIQRLVAWNSGGGGGATDT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G15 GNGGGFLFAPPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGFASGEFSSGFRIPARFQGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: RE_099 GNGGGFLFAPPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGFASGEFSSGFRIPARFHGQE 310 320 330 340 350 360 370 380 390 400 410 420 AT3G15 EEQHDGLTHKPSSASSISRH :::::::::::::::::::: RE_099 EEQHDGLTHKPSSASSISRH 410 420

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