◆◆◆RE_1062 detail◆◆◆

Code name	RE_1062
Locus	AT3G13850
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列98.90%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_1062_804bp ATGCCCTCAGGCAAACCTTCTTCTGTCTTCCCTTTACATCCCAAACCTACACCATTAAAACCTTCTAGCAGCACCAGCAGCAGCAACAACAACAGCACAG ACCAAGCCTGCGCCGCCTGCAAATACCAACGCAGGAAATGCGCTCCCGATTGTCTTCTTGCTCCTTATTTCCCTCACGACCGTCACCGCCAATTCCTTAA CGCGCATAAGCTCTTTGGAGTCAGCAACATCACCAAGATCATTAAATCCCTTACCCCTCCAGAGAAAGACGCAGCTATGCATACAATCATGTTTCAGTCC GATGCTCGTGCCAATGATCCCGTTGATGGATGCTATGGCATCATAAAAAAGCTTCAATACCAGATCGAATACACAAGAAACGAATTGGAGATTGTTCTTC AGCAATTGGCTATGTTCCGTGACCGTGCTCATCAACATCATCATCAAGAACCGCATATCCAGATGCAAGAACAAGAGGATCTCTCGGGTTTTTCGAGTTC TTGTGATCTAAACAACAACAATTCGATTCCTTACAATTACCCTCTGAATCACATTCAAGAACCAAATCAACAACAATATTGTTCTTCCGGTAATAACTTC AGTGGGTTACAAGAAGACATGTGGTGTCTTCAACTTCAAGATTCATCAACGATAGTGAATATGAAGGCTGGTTTCATTGATGAATGTGAAGACGTAAAGC CTGTAGAAGAGGTTTCTAGCGAACGACACGAGTTTGAGCCTCATGAAGCTTTCGTTGAACAACGGAAACTCGAATTGCCTTCCGCACAATACATCATTTC TTCT >RE_1062_translated MPSGKPSSVFPLHPKPTPLKPSSSTSSSNNNSTDQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQS DARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQMQEQEDLSGFSSSCDLNNNNSIPYNYPLNHIQEPNQQQYCSSGNNF SGLQEDMWCLQLQDSSTIVNMKAGFIDECEDVKPVEEVSSERHEFEPHEAFVEQRKLELPSAQYIISS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 801/804 (99.6%)（アミノ酸配列で265/268 (98.9%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G13 ATGCCCTCAGGCAAACCTTCTTCTGTCTTCCCTTTACATCCCAAACCTACACCATTAAAACCTTCTAGCAGCACCAGCAGCAGCAACAACAACAGCACAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 ATGCCCTCAGGCAAACCTTCTTCTGTCTTCCCTTTACATCCCAAACCTACACCATTAAAACCTTCTAGCAGCACCAGCAGCAGCAACAACAACAGCACAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G13 ACCAAGCCTGCGCCGCCTGCAAATACCAACGCAGGAAATGCGCTCCCGATTGTCTTCTTGCTCCTTATTTCCCTCACGACCGTCACCGCCAATTCCTTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 ACCAAGCCTGCGCCGCCTGCAAATACCAACGCAGGAAATGCGCTCCCGATTGTCTTCTTGCTCCTTATTTCCCTCACGACCGTCACCGCCAATTCCTTAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G13 CGCGCATAAGCTCTTTGGAGTCAGCAACATCACCAAGATCATTAAATCCCTTACCCCTCCAGAGAAAGACGCAGCTATGCATACAATCATGTTTCAGTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 CGCGCATAAGCTCTTTGGAGTCAGCAACATCACCAAGATCATTAAATCCCTTACCCCTCCAGAGAAAGACGCAGCTATGCATACAATCATGTTTCAGTCC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G13 GATGCTCGTGCCAATGATCCCGTTGATGGATGCTATGGCATCATAAAAAAGCTTCAATACCAGATCGAATACACAAGAAACGAATTGGAGATTGTTCTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 GATGCTCGTGCCAATGATCCCGTTGATGGATGCTATGGCATCATAAAAAAGCTTCAATACCAGATCGAATACACAAGAAACGAATTGGAGATTGTTCTTC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G13 AGCAATTGGCTATGTTCCGTGACCGTGCTCATCAACATCATCATCAAGAACCGCATATCCAGATGCAAGAACAAGAGGATCTCTCGAGTTTTTCGAGTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: RE_106 AGCAATTGGCTATGTTCCGTGACCGTGCTCATCAACATCATCATCAAGAACCGCATATCCAGATGCAAGAACAAGAGGATCTCTCGGGTTTTTCGAGTTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G13 TTGTGATCTAAACAACAACAATTCGATTCCTTACAATTACCCTCTGAATCACATTCAAGAACCAAATCAACAACAATATTGTTCTTCCGGTAATAACTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 TTGTGATCTAAACAACAACAATTCGATTCCTTACAATTACCCTCTGAATCACATTCAAGAACCAAATCAACAACAATATTGTTCTTCCGGTAATAACTTC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G13 AGTGGGTTACAAGAAGACATGTGGTGTCTTCAACTTCAAGATTCATCAACGATAGTGAATATGAAGGCTGGTTTCATTGATGAATGTGAAGACGTAAAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 AGTGGGTTACAAGAAGACATGTGGTGTCTTCAACTTCAAGATTCATCAACGATAGTGAATATGAAGGCTGGTTTCATTGATGAATGTGAAGACGTAAAGC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G13 CTGTAGAAGAGGTTTCTAGCGAACGACACGAGTTTGAGCCTCATGAAGCTTTCGTTGAACAACGGAAACTCGACTTGCCTTCCGCACAATACATCATTTC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: RE_106 CTGTAGAAGAGGTTTCTAGCGAACGACACGAGTTTGAGCCTCATGAAGCTTTCGTTGAACAACGGAAACTCGAATTGCCTTCCGCACAATACATCATTTC 710 720 730 740 750 760 770 780 790 800 AT3G13 TTCT :::: RE_106 TTCT 10 20 30 40 50 60 70 80 90 100 AT3G13 MPSGKPSSVFPLHPKPTPLKPSSSTSSSNNNSTNQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQS :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_106 MPSGKPSSVFPLHPKPTPLKPSSSTSSSNNNSTDQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G13 DARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQMQEQEDLSSFSSSCDLNNNNSIPYNYPLNHIQEPNQQQYCSSGNNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: RE_106 DARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQMQEQEDLSGFSSSCDLNNNNSIPYNYPLNHIQEPNQQQYCSSGNNF 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 AT3G13 SGLQEDMWCLQLQDSSTIVNMKAGFIDECEDVKPVEEVSSERHEFEPHEAFVEQRKLDLPSAQYIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: RE_106 SGLQEDMWCLQLQDSSTIVNMKAGFIDECEDVKPVEEVSSERHEFEPHEAFVEQRKLELPSAQYIISS 210 220 230 240 250 260

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