◆◆◆RE_1081 detail◆◆◆

Code name	RE_1081
Locus	AT1G25440
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_1081_1251bp ATGATGAAAAGTTTGGCGAATGCTGTTGGAGCGAAGACGGCGAGGGCTTGCGACAGCTGCGTGAAGAGACGTGCACGGTGGTACTGCGCGGCCGACGATG CTTTTCTTTGCCAGTCTTGCGACAGTTTGGTCCATTCAGCAAACCCTCTTGCTCGCCGCCACGAGAGAGTCCGTTTGAAGACGGCTAGCCCGGCGGTCGT AAAGCATAGCAACCACTCATCAGCTTCTCCTCCACATGAGGTCGCCACGTGGCATCACGGGTTTACTCGTAAAGCTCGAACGCCACGTGGCTCTGGTAAG AAAAACAATTCGTCGATATTTCATGACTTGGTTCCTGATATTAGTATTGAGGATCAGACAGACAACTATGAGCTTGAAGAGCAGCTGATCTGTCAAGTGC CGGTTCTAGATCCGTTGGTGTCTGAGCAGTTCTTGAACGATGTCGTTGAGCCCAAGATCGAGTTTCCTATGATCAGAAGTGGTTTGATGATCGAGGAGGA GGAAGACAACGCTGAAAGTTGTCTTAATGGATTTTTCCCGACCGACATGGAGCTTGAGGAGTTTGCTGCTGACGTGGAGACTCTGCTCGGTCGCGGGTTA GACACGGAGTCGTATGCCATGGAGGAGCTAGGGTTATCTAATTCAGAGATGTTCAAAATCGAAAAAGATGAGATTGAAGAAGAAGTAGAAGAGATAAAAG CCATGAGCATGGATATATTTGATGATGATCGAAAAGACGTGGATGGAACAGTACCGTTTGAGCTAAGCTTTGATTACGAGTCGTCACACAAGACGTCCGA AGAAGAGGTAATGAAGAACGTTGAAAGTAGTGGTGAATGTGTTGTTAAGGTGAAAGAGGAAGAGCATAAGAATGTTCTGATGCTAAGATTAAACTATGAC TCGGTGATATCCACTTGGGGAGGTCAAGGTCCACCGTGGAGTTCAGGAGAGCCACCGGAACGAGACATGGACATCAGCGGTTGGCCAGCCTTTTCCATGG TGGGGAATGGAGGAGAAAGTACTCATCAGAAGCAATACGTTGGTGGATGTTTACCATCAAGTGGGTTTGGAGATGGAGGTAGAGAAGCTAGAGTTTCGAG ATACAGAGAGAAGAGGAGGACAAGGTTGTTTTCTAAGAAGATACGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGACCACGAATGAAAGGAAGATTC GTGAAGAGAGCCTCGCTCGCTGCTGCTGCTTCACCATTAGGTGTTAATTAC >RE_1081_translated MMKSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGK KNNSSIFHDLVPDISIEDQTDNYELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPTDMELEEFAADVETLLGRGL DTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLMLRLNYD SVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVGNGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRF VKRASLAAAASPLGVNY
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1249/1251 (99.8%)（アミノ酸配列で416/417 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G25 ATGATGAAAAGTTTGGCGAATGCTGTTGGAGCGAAGACGGCGAGGGCTTGCGACAGCTGCGTGAAGAGACGTGCACGGTGGTACTGCGCGGCCGACGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 ATGATGAAAAGTTTGGCGAATGCTGTTGGAGCGAAGACGGCGAGGGCTTGCGACAGCTGCGTGAAGAGACGTGCACGGTGGTACTGCGCGGCCGACGATG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G25 CTTTTCTTTGCCAGTCTTGCGACAGTTTGGTCCATTCAGCAAACCCTCTTGCTCGCCGCCACGAGAGAGTCCGTTTGAAGACGGCTAGCCCGGCGGTCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 CTTTTCTTTGCCAGTCTTGCGACAGTTTGGTCCATTCAGCAAACCCTCTTGCTCGCCGCCACGAGAGAGTCCGTTTGAAGACGGCTAGCCCGGCGGTCGT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G25 AAAGCATAGCAACCACTCATCAGCTTCTCCTCCACATGAGGTCGCCACGTGGCATCACGGGTTTACTCGTAAAGCTCGAACGCCACGTGGCTCTGGTAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 AAAGCATAGCAACCACTCATCAGCTTCTCCTCCACATGAGGTCGCCACGTGGCATCACGGGTTTACTCGTAAAGCTCGAACGCCACGTGGCTCTGGTAAG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G25 AAAAACAATTCGTCGATATTTCATGACTTGGTTCCTGATATTAGTATTGAGGATCAGACAGACAACTATGAGCTTGAAGAGCAGCTGATCTGTCAAGTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 AAAAACAATTCGTCGATATTTCATGACTTGGTTCCTGATATTAGTATTGAGGATCAGACAGACAACTATGAGCTTGAAGAGCAGCTGATCTGTCAAGTGC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G25 CGGTTCTAGATCCGTTGGTGTCTGAGCAGTTCTTGAACGATGTCGTTGAGCCCAAGATCGAGTTTCCTATGATCAGAAGTGGTTTGATGATCGAGGAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 CGGTTCTAGATCCGTTGGTGTCTGAGCAGTTCTTGAACGATGTCGTTGAGCCCAAGATCGAGTTTCCTATGATCAGAAGTGGTTTGATGATCGAGGAGGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G25 GGAAGACAACGCTGAAAGTTGTCTTAATGGATTTTTCCCGACCGACATGGAGCTTGAGGAGTTTGCTGCTGACGTGGAGACTCTGCTCGGTCGCGGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 GGAAGACAACGCTGAAAGTTGTCTTAATGGATTTTTCCCGACCGACATGGAGCTTGAGGAGTTTGCTGCTGACGTGGAGACTCTGCTCGGTCGCGGGTTA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G25 GACACGGAGTCGTATGCCATGGAGGAGCTAGGGTTATCTAATTCAGAGATGTTCAAAATCGAAAAAGATGAGATTGAAGAAGAAGTAGAAGAGATAAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 GACACGGAGTCGTATGCCATGGAGGAGCTAGGGTTATCTAATTCAGAGATGTTCAAAATCGAAAAAGATGAGATTGAAGAAGAAGTAGAAGAGATAAAAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G25 CCATGAGCATGGATATATTTGATGATGATCGAAAAGACGTGGATGGAACAGTACCGTTTGAGCTAAGCTTTGATTACGAGTCGTCACACAAGACGTCCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 CCATGAGCATGGATATATTTGATGATGATCGAAAAGACGTGGATGGAACAGTACCGTTTGAGCTAAGCTTTGATTACGAGTCGTCACACAAGACGTCCGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G25 AGAAGAGGTAATGAAGAACGTTGAAAGTAGTGGTGAATGTGTTGTTAAGGTGAAAGAGGAAGAACATAAGAATGTTCTGATGCTAAGATTAAACTATGAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: RE_108 AGAAGAGGTAATGAAGAACGTTGAAAGTAGTGGTGAATGTGTTGTTAAGGTGAAAGAGGAAGAGCATAAGAATGTTCTGATGCTAAGATTAAACTATGAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G25 TCGGTGATATCCACTTGGGGAGGTCAAGGTCCACCGTGGAGTTCAGGAGAGCCACCGGAACGAGACATGGACATCAGCGGTTGGCCAGCCTTTTCCATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 TCGGTGATATCCACTTGGGGAGGTCAAGGTCCACCGTGGAGTTCAGGAGAGCCACCGGAACGAGACATGGACATCAGCGGTTGGCCAGCCTTTTCCATGG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G25 TGGAGAATGGAGGAGAAAGTACTCATCAGAAGCAATACGTTGGTGGATGTTTACCATCAAGTGGGTTTGGAGATGGAGGTAGAGAAGCTAGAGTTTCGAG ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 TGGGGAATGGAGGAGAAAGTACTCATCAGAAGCAATACGTTGGTGGATGTTTACCATCAAGTGGGTTTGGAGATGGAGGTAGAGAAGCTAGAGTTTCGAG 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G25 ATACAGAGAGAAGAGGAGGACAAGGTTGTTTTCTAAGAAGATACGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGACCACGAATGAAAGGAAGATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 ATACAGAGAGAAGAGGAGGACAAGGTTGTTTTCTAAGAAGATACGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGACCACGAATGAAAGGAAGATTC 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 AT1G25 GTGAAGAGAGCCTCGCTCGCTGCTGCTGCTTCACCATTAGGTGTTAATTAC ::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 GTGAAGAGAGCCTCGCTCGCTGCTGCTGCTTCACCATTAGGTGTTAATTAC 1210 1220 1230 1240 1250 10 20 30 40 50 60 70 80 90 100 AT1G25 MMKSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 MMKSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGK 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G25 KNNSSIFHDLVPDISIEDQTDNYELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPTDMELEEFAADVETLLGRGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 KNNSSIFHDLVPDISIEDQTDNYELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPTDMELEEFAADVETLLGRGL 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G25 DTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLMLRLNYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 DTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLMLRLNYD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G25 SVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRF :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 SVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVGNGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRF 310 320 330 340 350 360 370 380 390 400 410 AT1G25 VKRASLAAAASPLGVNY ::::::::::::::::: RE_108 VKRASLAAAASPLGVNY 410

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