◆◆◆RE_1086 detail◆◆◆

Code name	RE_1086
Locus	AT1G68520
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_1086_1218bp ATGATGGAAAGTTTGGCTAGTGCGGTTGGAGGGAAGACGGCGAGGGCATGTGATAGCTGCGTGAAGAGGCGGGCACGTTGGTATTGCGCAGCTGATGATG CCTTTCTTTGCCATGCTTGTGACGGTTCGGTCCACTCGGCAAACCCTCTTGCTCGTAGGCACGAGAGAGTTCGCTTGAAATCGGCTAGCGCCGGAAAGTA TCGCCATGCCTCGCCGCCTCACCAAGCCACGTGGCATCAGGGATTTACACGTAAAGCTCGGACCCCACGTGGAGGCAAGAAGAGCCACACGATGGTTTTT CATGATCTTGTGCCGGAGATGAGCACGGAGGATCAAGCGGAGAGTTACGAGGTGGAAGAGCAGCTCATATTTGAGGTGCCGGTGATGAACTCGATGGTTG AGGAGCAATGCTTTAACCAATCCCTGGAGAAACAGAATGAGTTTCCAATGATGCCCTTAAGTTTCAAGAGTAGTGACGAAGAAGATGACGACAACGCTGA GAGTTGTCTGAATGGTTTGTTCCCAACCGACATGGAACTAGCTCAGTTCACAGCTGACGTGGAGACTCTACTCGGTGGAGGGGATCGAGAGTTTCATTCC ATAGAAGAACTAGGGCTAGGTGAGATGTTAAAGATCGAAAAAGAGGAGGTGGAGGAAGAGGGAGTTGTGACAAGAGAAGTGCATGATCAAGATGAAGGTG ATGAGACATCCCCATTTGAAATAAGCTTTGACTACGAGTACACACACAAGACCACATTCGATGAAGGAGAAGAAGATGAGAAAGAAGACGTGATGAAGAA TGTGATGGAGATGGGAGTGAATGAGATGAGTGGTGGGATTAAAGAAGAGAAGAAGGAGAAGGCTCTTATGCTTAGATTGGACTATGAATCAGTCATTTCC ACTTGGGGAGGCCAAGGGATCCCATGGACCGCCCGGGTGCCATCTGAAATAGACCTCGACATGGTTTGTTTCCCAACCCATACCATGGGTGAAAGTGGAG CAGAGGCTCATCATCACAACCACTTCCGCGGCCTAGGGTTACACCTAGGAGATGCTGGGGATGGAGGAAGAGAGGCTAGGGTTTCAAGATACCGAGAGAA AAGGAGGACAAGGTTGTTCTCCAAGAAGATAAGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGGCCTCGCATGAAAGGAAGGTTCGTCAAGAGATCT TCAATTGGTGTTGCTCAC >RE_1086_translated MMESLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGKYRHASPPHQATWHQGFTRKARTPRGGKKSHTMVF HDLVPEMSTEDQAESYEVEEQLIFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHS IEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVIS TWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS SIGVAH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1216/1218 (99.8%)（アミノ酸配列で405/406 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G68 ATGATGAAAAGTTTGGCTAGTGCGGTTGGAGGGAAGACGGCGAGGGCATGTGATAGCTGCGTGAAGAGGCGGGCACGTTGGTATTGCGCAGCTGATGATG :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 ATGATGGAAAGTTTGGCTAGTGCGGTTGGAGGGAAGACGGCGAGGGCATGTGATAGCTGCGTGAAGAGGCGGGCACGTTGGTATTGCGCAGCTGATGATG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G68 CCTTTCTTTGCCATGCTTGTGACGGTTCGGTCCACTCGGCAAACCCTCTTGCTCGTAGGCACGAGAGAGTTCGCTTGAAATCGGCTAGCGCCGGAAAGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 CCTTTCTTTGCCATGCTTGTGACGGTTCGGTCCACTCGGCAAACCCTCTTGCTCGTAGGCACGAGAGAGTTCGCTTGAAATCGGCTAGCGCCGGAAAGTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G68 TCGCCATGCCTCGCCGCCTCACCAAGCCACGTGGCATCAGGGATTTACACGTAAAGCTCGGACCCCACGTGGAGGCAAGAAGAGCCACACGATGGTTTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 TCGCCATGCCTCGCCGCCTCACCAAGCCACGTGGCATCAGGGATTTACACGTAAAGCTCGGACCCCACGTGGAGGCAAGAAGAGCCACACGATGGTTTTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G68 CATGATCTTGTGCCGGAGATGAGCACGGAGGATCAAGCGGAGAGTTACGAGGTGGAAGAGCAGCTCATATTTGAGGTGCCGGTGATGAACTCGATGGTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 CATGATCTTGTGCCGGAGATGAGCACGGAGGATCAAGCGGAGAGTTACGAGGTGGAAGAGCAGCTCATATTTGAGGTGCCGGTGATGAACTCGATGGTTG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G68 AGGAGCAATGCTTTAACCAATCCCTGGAGAAACAGAATGAGTTTCCAATGATGCCCTTAAGTTTCAAGAGTAGTGACGAAGAAGATGACGACAACGCTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 AGGAGCAATGCTTTAACCAATCCCTGGAGAAACAGAATGAGTTTCCAATGATGCCCTTAAGTTTCAAGAGTAGTGACGAAGAAGATGACGACAACGCTGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G68 GAGTTGTCTGAATGGTTTGTTCCCAACCGACATGGAACTAGCTCAGTTCACAGCTGACGTGGAGACTCTACTCGGTGGAGGGGATCGAGAGTTTCATTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 GAGTTGTCTGAATGGTTTGTTCCCAACCGACATGGAACTAGCTCAGTTCACAGCTGACGTGGAGACTCTACTCGGTGGAGGGGATCGAGAGTTTCATTCC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G68 ATAGAAGAACTAGGGTTAGGTGAGATGTTAAAGATCGAAAAAGAGGAGGTGGAGGAAGAGGGAGTTGTGACAAGAGAAGTGCATGATCAAGATGAAGGTG ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 ATAGAAGAACTAGGGCTAGGTGAGATGTTAAAGATCGAAAAAGAGGAGGTGGAGGAAGAGGGAGTTGTGACAAGAGAAGTGCATGATCAAGATGAAGGTG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G68 ATGAGACATCCCCATTTGAAATAAGCTTTGACTACGAGTACACACACAAGACCACATTCGATGAAGGAGAAGAAGATGAGAAAGAAGACGTGATGAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 ATGAGACATCCCCATTTGAAATAAGCTTTGACTACGAGTACACACACAAGACCACATTCGATGAAGGAGAAGAAGATGAGAAAGAAGACGTGATGAAGAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G68 TGTGATGGAGATGGGAGTGAATGAGATGAGTGGTGGGATTAAAGAAGAGAAGAAGGAGAAGGCTCTTATGCTTAGATTGGACTATGAATCAGTCATTTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 TGTGATGGAGATGGGAGTGAATGAGATGAGTGGTGGGATTAAAGAAGAGAAGAAGGAGAAGGCTCTTATGCTTAGATTGGACTATGAATCAGTCATTTCC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G68 ACTTGGGGAGGCCAAGGGATCCCATGGACCGCCCGGGTGCCATCTGAAATAGACCTCGACATGGTTTGTTTCCCAACCCATACCATGGGTGAAAGTGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 ACTTGGGGAGGCCAAGGGATCCCATGGACCGCCCGGGTGCCATCTGAAATAGACCTCGACATGGTTTGTTTCCCAACCCATACCATGGGTGAAAGTGGAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G68 CAGAGGCTCATCATCACAACCACTTCCGCGGCCTAGGGTTACACCTAGGAGATGCTGGGGATGGAGGAAGAGAGGCTAGGGTTTCAAGATACCGAGAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 CAGAGGCTCATCATCACAACCACTTCCGCGGCCTAGGGTTACACCTAGGAGATGCTGGGGATGGAGGAAGAGAGGCTAGGGTTTCAAGATACCGAGAGAA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G68 AAGGAGGACAAGGTTGTTCTCCAAGAAGATAAGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGGCCTCGCATGAAAGGAAGGTTCGTCAAGAGATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 AAGGAGGACAAGGTTGTTCTCCAAGAAGATAAGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGGCCTCGCATGAAAGGAAGGTTCGTCAAGAGATCT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 AT1G68 TCAATTGGTGTTGCTCAC :::::::::::::::::: RE_108 TCAATTGGTGTTGCTCAC 1210 10 20 30 40 50 60 70 80 90 100 AT1G68 MMKSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGKYRHASPPHQATWHQGFTRKARTPRGGKKSHTMVF ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 MMESLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGKYRHASPPHQATWHQGFTRKARTPRGGKKSHTMVF 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G68 HDLVPEMSTEDQAESYEVEEQLIFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 HDLVPEMSTEDQAESYEVEEQLIFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G68 IEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 IEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVIS 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G68 TWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_108 TWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 310 320 330 340 350 360 370 380 390 400 AT1G68 SIGVAH :::::: RE_108 SIGVAH

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