◆◆◆RE_1108 detail◆◆◆

Code name	RE_1108
Locus	AT3G22760
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0318_アミノ酸配列100%一致
sequence	>RE_1108_1827bp ATGGATACACCGGAAAAGAGTGAAACCCAGATCGGTACTCCAGTTTCTAAACTCAAAGTCGAGGATTCACCAGTGTTTAGTTACATATGCAATCTCTCAC CAATTAAGACTATCAAACCAATTCCAATCACTTGTCCTTTAAGCTCTCTCAATTACGCATCTCCACCTTCTGTTTTCACTTCTCCTCACGCGGTTTCTCA TAAAGAGTCTCGTTTCAGAAGTCAAAAAGACGTGTCTGCTTCTAAAGAAGTTGGAGAAGAAGAAGCTTTAGTCGGTAGCGAACCGGAACAAAGCTACAAG AATGACTGCAATACTCCTAGAGTTACCAATGATGTGAAAGACAATGGTTGTGGGAAGGATTTGCAGGTGATGATGGACAATGTCAAGAAGAAAAGTGATA CTCCGGATTGGGAAACTTTGATTGCTGCTACAACAGAACTGATTTATGGCTCACCGAGAGAGTCAGAGGCTTTTAGTTGCTTGTTGAAGAAAACTTCAAA CTCTGAAGCACGTCTACGTGGTAGTATAACTGCAACATCGGTGGCTGTTACGAATACCGATGTAGTCAACAATGAATCTGAATCTGTTGATGCTCTTTCG ATATTGCACCGTGGTGTGAGAAGACGGTGTTTAGACTTTGAGGTTAAGGGGAATAATCAGCAAACATTAGGAGAATCTTCATCTAGTTGTGTAGTACCTA GCATTGGTCTGCATCTTAACACCATTGCAATGTCCTCTAAGGACAAGAATGTTGCTAATGAGTATTCATTTTCCGGTAACATAAAAGTCGGTGTGCAAAG TTCTCTGACTCCGGTGCTTCATTCGCAGCACGACATCGTGAGAGAAAATGAAAGCGGGAAAGATTCAGGACAAATTATAGAAGTGGTTCCAAAGTCTTTA GCTTCAGTAGACTTGACTCCAATAAGCCCCAAGAAGAAAAGGCGTAAGTCCGAACAATCAGGAGAAGGCGACTCGTCATGTAAACGGTGCAACTGCAAAA AATCCAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGATTTTATTGCATAGAGCCATGTTCATGTATAAATTGCTTCAACAAACCTATCCATAA AGATGTTGTCCTGGCTACTCGCAAACAGATTGAATCCCGCAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAACTCAGATTCCATCATTGAAGTTGGT GAGGATGCAAGTAAAACTCCAGCTTCAGCGCGACACAAACGAGGCTGTAACTGCAAGAAATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGCG GAGTTGGTTGTTCTATAAACTGTAGATGTGAAGGATGTAAAAATGCATTTGGCAGAAAAGATGGGTCTTTGTTCGAACAAGATGAGGAGAATGAAACATC TGGCACACCCGGAACAAAGAAAACACAACAGAATGTCGAGTTGTTCAAACCTGCAGCTCCACCTTCAACACCAATTCCATTTAGACAACCACTGGCGCAA CTTCCAATCTCATCCAACAACAGACTGCTACCTCCACAGTCTCATTTTCATCATGGAGCTATTGGATCATCTTCCTCAGGGATATACAACATCAGAAAAC CAGACATGAGTTTGTTGTCTCATTCAAGAATCGAGACAATCACAGAGGATATTGATGATATGTCTGAGAATCTAATCCATTCTCCAATAACTACTCTATC TCCCAACAGCAAAAGGGTTTCGTTGTCTCATCTTGATTCACCAGAGTCGACTCCATGGAGAAGAAATGGTGGGGGGAGGAATCTGATACGTTCGTTCCCA ACGTTTCCTTCTCTCACTCCACACCAT >RE_1108_translated MDTPEKSETQIGTPVSKLKVEDSPVFSYICNLSPIKTIKPIPITCPLSSLNYASPPSVFTSPHAVSHKESRFRSQKDVSASKEVGEEEALVGSEPEQSYK NDCNTPRVTNDVKDNGCGKDLQVMMDNVKKKSDTPDWETLIAATTELIYGSPRESEAFSCLLKKTSNSEARLRGSITATSVAVTNTDVVNNESESVDALS ILHRGVRRRCLDFEVKGNNQQTLGESSSSCVVPSIGLHLNTIAMSSKDKNVANEYSFSGNIKVGVQSSLTPVLHSQHDIVRENESGKDSGQIIEVVPKSL ASVDLTPISPKKKRRKSEQSGEGDSSCKRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFNKPIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVG EDASKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSLFEQDEENETSGTPGTKKTQQNVELFKPAAPPSTPIPFRQPLAQ LPISSNNRLLPPQSHFHHGAIGSSSSGIYNIRKPDMSLLSHSRIETITEDIDDMSENLIHSPITTLSPNSKRVSLSHLDSPESTPWRRNGGGRNLIRSFP TFPSLTPHH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1826/1827 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G22 ATGGATACACCGGAAAAGAGTGAAACCCAGATCGGTACTCCAGTTTCTAAACTCAAAGTCGAGGATTCACCAGTGTTTAGTTACATATGCAATCTCTCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 ATGGATACACCGGAAAAGAGTGAAACCCAGATCGGTACTCCAGTTTCTAAACTCAAAGTCGAGGATTCACCAGTGTTTAGTTACATATGCAATCTCTCAC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G22 CAATTAAGACTATCAAACCAATTCCAATCACTTGTCCTTTAAGCTCTCTCAATTACGCATCTCCACCTTCTGTTTTCACTTCTCCTCACGCGGTTTCTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 CAATTAAGACTATCAAACCAATTCCAATCACTTGTCCTTTAAGCTCTCTCAATTACGCATCTCCACCTTCTGTTTTCACTTCTCCTCACGCGGTTTCTCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G22 TAAAGAGTCTCGTTTCAGAAGTCAAAAAGATGTGTCTGCTTCTAAAGAAGTTGGAGAAGAAGAAGCTTTAGTCGGTAGCGAACCGGAACAAAGCTACAAG :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 TAAAGAGTCTCGTTTCAGAAGTCAAAAAGACGTGTCTGCTTCTAAAGAAGTTGGAGAAGAAGAAGCTTTAGTCGGTAGCGAACCGGAACAAAGCTACAAG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G22 AATGACTGCAATACTCCTAGAGTTACCAATGATGTGAAAGACAATGGTTGTGGGAAGGATTTGCAGGTGATGATGGACAATGTCAAGAAGAAAAGTGATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 AATGACTGCAATACTCCTAGAGTTACCAATGATGTGAAAGACAATGGTTGTGGGAAGGATTTGCAGGTGATGATGGACAATGTCAAGAAGAAAAGTGATA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G22 CTCCGGATTGGGAAACTTTGATTGCTGCTACAACAGAACTGATTTATGGCTCACCGAGAGAGTCAGAGGCTTTTAGTTGCTTGTTGAAGAAAACTTCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 CTCCGGATTGGGAAACTTTGATTGCTGCTACAACAGAACTGATTTATGGCTCACCGAGAGAGTCAGAGGCTTTTAGTTGCTTGTTGAAGAAAACTTCAAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G22 CTCTGAAGCACGTCTACGTGGTAGTATAACTGCAACATCGGTGGCTGTTACGAATACCGATGTAGTCAACAATGAATCTGAATCTGTTGATGCTCTTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 CTCTGAAGCACGTCTACGTGGTAGTATAACTGCAACATCGGTGGCTGTTACGAATACCGATGTAGTCAACAATGAATCTGAATCTGTTGATGCTCTTTCG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G22 ATATTGCACCGTGGTGTGAGAAGACGGTGTTTAGACTTTGAGGTTAAGGGGAATAATCAGCAAACATTAGGAGAATCTTCATCTAGTTGTGTAGTACCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 ATATTGCACCGTGGTGTGAGAAGACGGTGTTTAGACTTTGAGGTTAAGGGGAATAATCAGCAAACATTAGGAGAATCTTCATCTAGTTGTGTAGTACCTA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G22 GCATTGGTCTGCATCTTAACACCATTGCAATGTCCTCTAAGGACAAGAATGTTGCTAATGAGTATTCATTTTCCGGTAACATAAAAGTCGGTGTGCAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 GCATTGGTCTGCATCTTAACACCATTGCAATGTCCTCTAAGGACAAGAATGTTGCTAATGAGTATTCATTTTCCGGTAACATAAAAGTCGGTGTGCAAAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G22 TTCTCTGACTCCGGTGCTTCATTCGCAGCACGACATCGTGAGAGAAAATGAAAGCGGGAAAGATTCAGGACAAATTATAGAAGTGGTTCCAAAGTCTTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 TTCTCTGACTCCGGTGCTTCATTCGCAGCACGACATCGTGAGAGAAAATGAAAGCGGGAAAGATTCAGGACAAATTATAGAAGTGGTTCCAAAGTCTTTA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G22 GCTTCAGTAGACTTGACTCCAATAAGCCCCAAGAAGAAAAGGCGTAAGTCCGAACAATCAGGAGAAGGCGACTCGTCATGTAAACGGTGCAACTGCAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 GCTTCAGTAGACTTGACTCCAATAAGCCCCAAGAAGAAAAGGCGTAAGTCCGAACAATCAGGAGAAGGCGACTCGTCATGTAAACGGTGCAACTGCAAAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G22 AATCCAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGATTTTATTGCATAGAGCCATGTTCATGTATAAATTGCTTCAACAAACCTATCCATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 AATCCAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGATTTTATTGCATAGAGCCATGTTCATGTATAAATTGCTTCAACAAACCTATCCATAA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT3G22 AGATGTTGTCCTGGCTACTCGCAAACAGATTGAATCCCGCAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAACTCAGATTCCATCATTGAAGTTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 AGATGTTGTCCTGGCTACTCGCAAACAGATTGAATCCCGCAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAACTCAGATTCCATCATTGAAGTTGGT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT3G22 GAGGATGCAAGTAAAACTCCAGCTTCAGCGCGACACAAACGAGGCTGTAACTGCAAGAAATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 GAGGATGCAAGTAAAACTCCAGCTTCAGCGCGACACAAACGAGGCTGTAACTGCAAGAAATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGCG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 AT3G22 GAGTTGGTTGTTCTATAAACTGTAGATGTGAAGGATGTAAAAATGCATTTGGCAGAAAAGATGGGTCTTTGTTCGAACAAGATGAGGAGAATGAAACATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 GAGTTGGTTGTTCTATAAACTGTAGATGTGAAGGATGTAAAAATGCATTTGGCAGAAAAGATGGGTCTTTGTTCGAACAAGATGAGGAGAATGAAACATC 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 AT3G22 TGGCACACCCGGAACAAAGAAAACACAACAGAATGTCGAGTTGTTCAAACCTGCAGCTCCACCTTCAACACCAATTCCATTTAGACAACCACTGGCGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 TGGCACACCCGGAACAAAGAAAACACAACAGAATGTCGAGTTGTTCAAACCTGCAGCTCCACCTTCAACACCAATTCCATTTAGACAACCACTGGCGCAA 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 AT3G22 CTTCCAATCTCATCCAACAACAGACTGCTACCTCCACAGTCTCATTTTCATCATGGAGCTATTGGATCATCTTCCTCAGGGATATACAACATCAGAAAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 CTTCCAATCTCATCCAACAACAGACTGCTACCTCCACAGTCTCATTTTCATCATGGAGCTATTGGATCATCTTCCTCAGGGATATACAACATCAGAAAAC 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 AT3G22 CAGACATGAGTTTGTTGTCTCATTCAAGAATCGAGACAATCACAGAGGATATTGATGATATGTCTGAGAATCTAATCCATTCTCCAATAACTACTCTATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 CAGACATGAGTTTGTTGTCTCATTCAAGAATCGAGACAATCACAGAGGATATTGATGATATGTCTGAGAATCTAATCCATTCTCCAATAACTACTCTATC 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 AT3G22 TCCCAACAGCAAAAGGGTTTCGTTGTCTCATCTTGATTCACCAGAGTCGACTCCATGGAGAAGAAATGGTGGGGGGAGGAATCTGATACGTTCGTTCCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 TCCCAACAGCAAAAGGGTTTCGTTGTCTCATCTTGATTCACCAGAGTCGACTCCATGGAGAAGAAATGGTGGGGGGAGGAATCTGATACGTTCGTTCCCA 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 AT3G22 ACGTTTCCTTCTCTCACTCCACACCAT ::::::::::::::::::::::::::: RE_110 ACGTTTCCTTCTCTCACTCCACACCAT 1810 1820 10 20 30 40 50 60 70 80 90 100 AT3G22 MDTPEKSETQIGTPVSKLKVEDSPVFSYICNLSPIKTIKPIPITCPLSSLNYASPPSVFTSPHAVSHKESRFRSQKDVSASKEVGEEEALVGSEPEQSYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 MDTPEKSETQIGTPVSKLKVEDSPVFSYICNLSPIKTIKPIPITCPLSSLNYASPPSVFTSPHAVSHKESRFRSQKDVSASKEVGEEEALVGSEPEQSYK 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G22 NDCNTPRVTNDVKDNGCGKDLQVMMDNVKKKSDTPDWETLIAATTELIYGSPRESEAFSCLLKKTSNSEARLRGSITATSVAVTNTDVVNNESESVDALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 NDCNTPRVTNDVKDNGCGKDLQVMMDNVKKKSDTPDWETLIAATTELIYGSPRESEAFSCLLKKTSNSEARLRGSITATSVAVTNTDVVNNESESVDALS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G22 ILHRGVRRRCLDFEVKGNNQQTLGESSSSCVVPSIGLHLNTIAMSSKDKNVANEYSFSGNIKVGVQSSLTPVLHSQHDIVRENESGKDSGQIIEVVPKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 ILHRGVRRRCLDFEVKGNNQQTLGESSSSCVVPSIGLHLNTIAMSSKDKNVANEYSFSGNIKVGVQSSLTPVLHSQHDIVRENESGKDSGQIIEVVPKSL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G22 ASVDLTPISPKKKRRKSEQSGEGDSSCKRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFNKPIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 ASVDLTPISPKKKRRKSEQSGEGDSSCKRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFNKPIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G22 EDASKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSLFEQDEENETSGTPGTKKTQQNVELFKPAAPPSTPIPFRQPLAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 EDASKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSLFEQDEENETSGTPGTKKTQQNVELFKPAAPPSTPIPFRQPLAQ 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G22 LPISSNNRLLPPQSHFHHGAIGSSSSGIYNIRKPDMSLLSHSRIETITEDIDDMSENLIHSPITTLSPNSKRVSLSHLDSPESTPWRRNGGGRNLIRSFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_110 LPISSNNRLLPPQSHFHHGAIGSSSSGIYNIRKPDMSLLSHSRIETITEDIDDMSENLIHSPITTLSPNSKRVSLSHLDSPESTPWRRNGGGRNLIRSFP 510 520 530 540 550 560 570 580 590 600 AT3G22 TFPSLTPHH ::::::::: RE_110 TFPSLTPHH

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