◆◆◆RE_1116 detail◆◆◆

Code name	RE_1116
Locus	AT5G14960
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0520_third_1116_FRW1_525
sequence	>RE_1116_1077bp ATGGATTCTCTCGCTCTCGCTCCCCAGGTTTACAGCCGCAAGGACAAATCTCTCGGCGTTCTTGTCGCCAATTTCTTGACACTGTATAATCGTCCCGATG TTGATCTATTTGGGCTCGATGATGCCGCCGCGAAATTAGGAGTTGAACGTCGGCGTATTTATGATGTGGTCAATATATTGGAGAGTATTGGGCTTGTTGC AAGAAGTGGGAAGAATCAGTATTCGTGGAAAGGTTTTGGAGCTGTTCCTCGTGCTCTATCTGAACTCAAAGAAGAGGGAATGAAAGAGAAGTTTGCGATC GTCCCTTTTGTGGCCAAGTCAGAGATGGTCGTTTATGAGACAGAAGGAGAAGAATCTTTCATGTTATCTCCTGATGATCAAGAGTTCTCACCATCTCCCA GACCTGACAACAGGAAGGAGAGAACTCTCTGGCTACTTGCACAGAACTTTGTGAAGCTGTTTTTATGCTCTGATGATGATCTGGTAACATTTGATAGCGC TACAAAAGCATTGCTGAATGAGTCTCAGGATATGAATATGAGAAAGAAAGTTAGACGCCTTTACGACATTGCAAATGTGTTTTCCTCAATGAAGCTAATC GAGAAGACTCATGTCCCAGAGACTAAGAAGCCGGCATATAGGTGGTTGGGATCTAAAACCATATTTGAAAACAGATTCATTGATGGTTCTGCAAGCTTAT GTGATCGTAATGTGCCTAAAAAGCGGGCATTTGGGACCGAACTCACAAACGTTAACGCAAAGAGAAACAAATCAGGTTGTTCTAAAGAAGACAGCAAGCG TAATGGAAATCAAAACACAAGCATTGTTATCAAGCAAGAACAATGTGATGATGTGAAACCGGACGTGAAGAATTTTGCCTCTGGATCATCCACTCCTGCA GGCACTTCTGAGAGTAACGATATGGGAAACAACATTAGGCCAAGAGGTAGACTTGGAGTTATCGAAGCCCTTTCTACTCTTTACCAACCATCATATTGCA ATCCTGAGTTACTTGGTCTTTTTGCGCATTACAACGAGACATTTAGGTCATATCAAGAAGAGTTTGGTCGGGAGAAA >RE_1116_translated MDSLALAPQVYSRKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGKNQYSWKGFGAVPRALSELKEEGMKEKFAI VPFVAKSEMVVYETEGEESFMLSPDDQEFSPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLI EKTHVPETKKPAYRWLGSKTIFENRFIDGSASLCDRNVPKKRAFGTELTNVNAKRNKSGCSKEDSKRNGNQNTSIVIKQEQCDDVKPDVKNFASGSSTPA GTSESNDMGNNIRPRGRLGVIEALSTLYQPSYCNPELLGLFAHYNETFRSYQEEFGREK
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1076/1077 (99.9%)（アミノ酸配列で358/359 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G14 ATGGATTCTCTCGCTCTCGCTCCCCAGGTTTACAGCCGCAAGGACAAATCTCTCGGCGTTCTTGTCGCCAATTTCTTGACACTGTATAATCGTCCCGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 ATGGATTCTCTCGCTCTCGCTCCCCAGGTTTACAGCCGCAAGGACAAATCTCTCGGCGTTCTTGTCGCCAATTTCTTGACACTGTATAATCGTCCCGATG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G14 TTGATCTATTTGGGCTCGATGATGCCGCCGCGAAATTAGGAGTTGAACGTCGGCGTATTTATGATGTGGTCAATATATTGGAGAGTATTGGGCTTGTTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 TTGATCTATTTGGGCTCGATGATGCCGCCGCGAAATTAGGAGTTGAACGTCGGCGTATTTATGATGTGGTCAATATATTGGAGAGTATTGGGCTTGTTGC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G14 AAGAAGTGGGAAGAATCAGTATTCGTGGAAAGGTTTTGGAGCTGTTCCTCGTGCTCTATCTGAACTCAAAGAAGAGGGAATGAAAGAGAAGTTTGCGATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 AAGAAGTGGGAAGAATCAGTATTCGTGGAAAGGTTTTGGAGCTGTTCCTCGTGCTCTATCTGAACTCAAAGAAGAGGGAATGAAAGAGAAGTTTGCGATC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G14 GTCCCTTTTGTGGCCAAGTCAGAGATGGTCGTTTATGAGAAAGAAGGAGAAGAATCTTTCATGTTATCTCCTGATGATCAAGAGTTCTCACCATCTCCCA :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GTCCCTTTTGTGGCCAAGTCAGAGATGGTCGTTTATGAGACAGAAGGAGAAGAATCTTTCATGTTATCTCCTGATGATCAAGAGTTCTCACCATCTCCCA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G14 GACCTGACAACAGGAAGGAGAGAACTCTCTGGCTACTTGCACAGAACTTTGTGAAGCTGTTTTTATGCTCTGATGATGATCTGGTAACATTTGATAGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GACCTGACAACAGGAAGGAGAGAACTCTCTGGCTACTTGCACAGAACTTTGTGAAGCTGTTTTTATGCTCTGATGATGATCTGGTAACATTTGATAGCGC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G14 TACAAAAGCATTGCTGAATGAGTCTCAGGATATGAATATGAGAAAGAAAGTTAGACGCCTTTACGACATTGCAAATGTGTTTTCCTCAATGAAGCTAATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 TACAAAAGCATTGCTGAATGAGTCTCAGGATATGAATATGAGAAAGAAAGTTAGACGCCTTTACGACATTGCAAATGTGTTTTCCTCAATGAAGCTAATC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G14 GAGAAGACTCATGTCCCAGAGACTAAGAAGCCGGCATATAGGTGGTTGGGATCTAAAACCATATTTGAAAACAGATTCATTGATGGTTCTGCAAGCTTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GAGAAGACTCATGTCCCAGAGACTAAGAAGCCGGCATATAGGTGGTTGGGATCTAAAACCATATTTGAAAACAGATTCATTGATGGTTCTGCAAGCTTAT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G14 GTGATCGTAATGTGCCTAAAAAGCGGGCATTTGGGACCGAACTCACAAACGTTAACGCAAAGAGAAACAAATCAGGTTGTTCTAAAGAAGACAGCAAGCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GTGATCGTAATGTGCCTAAAAAGCGGGCATTTGGGACCGAACTCACAAACGTTAACGCAAAGAGAAACAAATCAGGTTGTTCTAAAGAAGACAGCAAGCG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G14 TAATGGAAATCAAAACACAAGCATTGTTATCAAGCAAGAACAATGTGATGATGTGAAACCGGACGTGAAGAATTTTGCCTCTGGATCATCCACTCCTGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 TAATGGAAATCAAAACACAAGCATTGTTATCAAGCAAGAACAATGTGATGATGTGAAACCGGACGTGAAGAATTTTGCCTCTGGATCATCCACTCCTGCA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G14 GGCACTTCTGAGAGTAACGATATGGGAAACAACATTAGGCCAAGAGGTAGACTTGGAGTTATCGAAGCCCTTTCTACTCTTTACCAACCATCATATTGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GGCACTTCTGAGAGTAACGATATGGGAAACAACATTAGGCCAAGAGGTAGACTTGGAGTTATCGAAGCCCTTTCTACTCTTTACCAACCATCATATTGCA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 AT5G14 ATCCTGAGTTACTTGGTCTTTTTGCGCATTACAACGAGACATTTAGGTCATATCAAGAAGAGTTTGGTCGGGAGAAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 ATCCTGAGTTACTTGGTCTTTTTGCGCATTACAACGAGACATTTAGGTCATATCAAGAAGAGTTTGGTCGGGAGAAA 1010 1020 1030 1040 1050 1060 1070 10 20 30 40 50 60 70 80 90 100 AT5G14 MDSLALAPQVYSRKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGKNQYSWKGFGAVPRALSELKEEGMKEKFAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 MDSLALAPQVYSRKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGKNQYSWKGFGAVPRALSELKEEGMKEKFAI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G14 VPFVAKSEMVVYEKEGEESFMLSPDDQEFSPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLI ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 VPFVAKSEMVVYETEGEESFMLSPDDQEFSPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLI 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G14 EKTHVPETKKPAYRWLGSKTIFENRFIDGSASLCDRNVPKKRAFGTELTNVNAKRNKSGCSKEDSKRNGNQNTSIVIKQEQCDDVKPDVKNFASGSSTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 EKTHVPETKKPAYRWLGSKTIFENRFIDGSASLCDRNVPKKRAFGTELTNVNAKRNKSGCSKEDSKRNGNQNTSIVIKQEQCDDVKPDVKNFASGSSTPA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT5G14 GTSESNDMGNNIRPRGRLGVIEALSTLYQPSYCNPELLGLFAHYNETFRSYQEEFGREK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GTSESNDMGNNIRPRGRLGVIEALSTLYQPSYCNPELLGLFAHYNETFRSYQEEFGREK 310 320 330 340 350

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