◆◆◆RE_1118 detail◆◆◆

Code name	RE_1118
Locus	AT1G73730
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_1118_1701bp ATGGGCGATCTTGCTATGTCCGTAGCAGACATCAGGATGGAGAATGAGCCTGATGATTTAGCTAGTGATAATGTTGCTGAGATTGATGTGAGTGATGAAG AGATTGATGCTGACGACCTTGAGAGACGGATGTGGAAAGATCGTGTCAGGCTTAAAAGAATCAAAGAGCGACAAAAAGCTGGCTCTCAAGGAGCTCAAAC GAAGGAGACACCTAAGAAAATCTCTGATCAAGCTCAGAGGAAGAAAATGTCTAGAGCTCAAGATGGTATCCTTAAGTACATGTTGAAGCTTATGGAAGTC TGCAAAGTTCGCGGGTTTGTCTATGGTATAATACCGGAAAAGGGCAAGCCTGTGAGTGGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGA AGTTTGATAAGAACGGTCCCGCTGCTATTGCTAAATACGAAGAGGAGTGTTTAGCGTTTGGGAAATCTGATGGGAATAGGAATTCACAGTTTGTTCTCCA GGATTTGCAAGATGCTACTTTAGGGTCTTTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAGGAAGTATCCGTTGGAGAAAGGGACGCCTCCG CCTTGGTGGCCAACGGGGAATGAAGAATGGTGGGTGAAACTCGGTCTGCCTAAAAGCCAGAGTCCTCCTTACCGAAAACCTCATGATCTCAAGAAGATGT GGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTTACCTGATATTGCAAAGATTAAGAGGCATGTTCGTCAGTCGAAATGTTTACAGGACAAGAT GACAGCTAAAGAGAGTGCGATTTGGTTGGCGGTTTTGAACCAAGAGGAATCTTTGATTCAGCAGCCTAGCAGTGACAATGGAAACTCCAACGTGACTGAG ACACATCGTAGGGGTAATAACGCTGACAGGAGGAAACCTGTGGTCAACAGTGACAGTGACTATGATGTTGATGGGACAGAGGAAGCTTCAGGTTCAGTTT CATCTAAAGACAGTAGAAGAAATCAGATTCAAAAAGAACAACCAACAGCCATCTCACATTCAGTAAGAGATCAAGATAAAGCAGAGAAACATCGCAGAAG GAAAAGACCTCGAATTAGATCCGGAACTGTCAATCGACAAGAGGAAGAACAACCTGAAGCTCAACAAAGAAACATCTTACCTGATATGAATCATGTTGAC GCCCCTCTGCTAGAATATAACATCAACGGTACTCATCAAGAGGACGATGTTGTCGACCCAAATATTGCCTTAGGACCAGAGGATAATGGTCTGGAACTAG TGGTTCCTGAGTTCAATAACAACTATACTTATCTTCCACTTGTTAATGAACAAACTATGATGCCTGTAGACGAAAGGCCAATGCCTTATGGACCAAACCC TAACCAAGAGCTTCAATTTGGGTCAGGGTACAACTTCTACAATCCCTCTGCAGTGTTTGTACATAACCAGGAAGACGACATTCTCCATACACAGATAGAA ATGAATACACAAGCACCACCTCACAACAGTGGGTTCGAGGAGGCCCCAGGAGGAGTACTTCAACCCCTTGGTTTACTCGGAAATGAAGACGGTGTAACAG GGAGTGAGTTGCCTCAGTATCAGAGTGGCATTCTGTCTCCATTGACTGACTTGGACTTTGACTATGGTGGTTTTGGTGATGATTTCTCATGGTTTGGAGC T >RE_1118_translated MGDLAMSVADIRMENEPDDLASDNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEV CKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGNRNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPP PWWPTGNEEWWVKLGLPKSQSPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDNGNSNVTE THRRGNNADRRKPVVNSDSDYDVDGTEEASGSVSSKDSRRNQIQKEQPTAISHSVRDQDKAEKHRRRKRPRIRSGTVNRQEEEQPEAQQRNILPDMNHVD APLLEYNINGTHQEDDVVDPNIALGPEDNGLELVVPEFNNNYTYLPLVNEQTMMPVDERPMPYGPNPNQELQFGSGYNFYNPSAVFVHNQEDDILHTQIE MNTQAPPHNSGFEEAPGGVLQPLGLLGNEDGVTGSELPQYQSGILSPLTDLDFDYGGFGDDFSWFGA
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1697/1701 (99.8%)（アミノ酸配列で566/567 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G73 ATGGGCGATCTTGCTATGTCCGTAGCAGACATCAGGATGGAGAATGAGCCTGATGATTTAGCTAGTGATAATGTTGCTGAGATTGATGTGAGTGATGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 ATGGGCGATCTTGCTATGTCCGTAGCAGACATCAGGATGGAGAATGAGCCTGATGATTTAGCTAGTGATAATGTTGCTGAGATTGATGTGAGTGATGAAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G73 AGATTGATGCTGACGACCTTGAGAGACGGATGTGGAAAGATCGTGTCAGGCTTAAAAGAATCAAAGAGCGACAAAAAGCTGGCTCTCAAGGAGCTCAAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 AGATTGATGCTGACGACCTTGAGAGACGGATGTGGAAAGATCGTGTCAGGCTTAAAAGAATCAAAGAGCGACAAAAAGCTGGCTCTCAAGGAGCTCAAAC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G73 GAAGGAGACACCTAAGAAAATCTCTGATCAAGCTCAGAGGAAGAAAATGTCTAGAGCTCAAGATGGTATCCTTAAGTACATGTTGAAGCTTATGGAAGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GAAGGAGACACCTAAGAAAATCTCTGATCAAGCTCAGAGGAAGAAAATGTCTAGAGCTCAAGATGGTATCCTTAAGTACATGTTGAAGCTTATGGAAGTC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G73 TGCAAAGTTCGCGGGTTTGTCTATGGTATAATACCGGAAAAGGGCAAGCCTGTGAGTGGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 TGCAAAGTTCGCGGGTTTGTCTATGGTATAATACCGGAAAAGGGCAAGCCTGTGAGTGGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G73 AGTTTGATAAGAACGGTCCTGCTGCTATTGCTAAATACGAAGAGGAGTGTTTAGCGTTTGGGAAATCTGATGGGAATAGGAATTCACAGTTTGTTCTCCA ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 AGTTTGATAAGAACGGTCCCGCTGCTATTGCTAAATACGAAGAGGAGTGTTTAGCGTTTGGGAAATCTGATGGGAATAGGAATTCACAGTTTGTTCTCCA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G73 GGATTTGCAAGATGCTACTTTAGGGTCTTTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAGGAAGTATCCGTTGGAGAAAGGGACGCCTCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GGATTTGCAAGATGCTACTTTAGGGTCTTTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAGGAAGTATCCGTTGGAGAAAGGGACGCCTCCG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G73 CCTTGGTGGCCAACGGGGAATGAAGAATGGTGGGTGAAACTCGGTCTGCCTAAAAGCCAGAGTCCTCCTTACCGAAAACCTCATGATCTCAAGAAGATGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 CCTTGGTGGCCAACGGGGAATGAAGAATGGTGGGTGAAACTCGGTCTGCCTAAAAGCCAGAGTCCTCCTTACCGAAAACCTCATGATCTCAAGAAGATGT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G73 GGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTTACCTGATATTGCAAAGATTAAGAGGCATGTTCGTCAGTCGAAATGTTTACAGGACAAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTTACCTGATATTGCAAAGATTAAGAGGCATGTTCGTCAGTCGAAATGTTTACAGGACAAGAT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G73 GACAGCTAAAGAGAGTGCGATTTGGTTGGCGGTTTTGAACCAAGAGGAATCTTTGATTCAGCAGCCTAGCAGTGACAATGGAAACTCCAATGTGACTGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: RE_111 GACAGCTAAAGAGAGTGCGATTTGGTTGGCGGTTTTGAACCAAGAGGAATCTTTGATTCAGCAGCCTAGCAGTGACAATGGAAACTCCAACGTGACTGAG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G73 ACACATCGTAGGGGTAATAACGCTGACAGGAGGAAACCTGTGGTCAACAGTGACAGTGACTATGATGTTGATGGGACAGAGGAAGCTTCAGGTTCAGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 ACACATCGTAGGGGTAATAACGCTGACAGGAGGAAACCTGTGGTCAACAGTGACAGTGACTATGATGTTGATGGGACAGAGGAAGCTTCAGGTTCAGTTT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G73 CATCTAAAGACAGTAGAAGAAATCAGATTCAAAAAGAACAACCAACAGCCATCTCACATTCAGTAAGAGATCAAGATAAAGCAGAGAAACATCGCAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 CATCTAAAGACAGTAGAAGAAATCAGATTCAAAAAGAACAACCAACAGCCATCTCACATTCAGTAAGAGATCAAGATAAAGCAGAGAAACATCGCAGAAG 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G73 GAAAAGACCTCGAATTAGATCCGGAACTGTCAATCGACAAGAGGAAGAACAACCTGAAGCTCAACAAAGAAACATCTTACCTGATATGAATCATGTTGAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GAAAAGACCTCGAATTAGATCCGGAACTGTCAATCGACAAGAGGAAGAACAACCTGAAGCTCAACAAAGAAACATCTTACCTGATATGAATCATGTTGAC 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT1G73 GCCCCTCTGCTAGAATATAACATCAACGGTACTCATCAAGAGGACGATGTTGTCGACCCAAATATTGCCTTAGGACCAGAGGATAATGGTCTGGAACTAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GCCCCTCTGCTAGAATATAACATCAACGGTACTCATCAAGAGGACGATGTTGTCGACCCAAATATTGCCTTAGGACCAGAGGATAATGGTCTGGAACTAG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 AT1G73 TGGTTCCTGAGTTCAATAACAACTATACTTATCTTCCACTTGTTAATGAACAAACTATGATGCCTGTAGACGAAAGGCCAATGCTTTATGGACCAAACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: RE_111 TGGTTCCTGAGTTCAATAACAACTATACTTATCTTCCACTTGTTAATGAACAAACTATGATGCCTGTAGACGAAAGGCCAATGCCTTATGGACCAAACCC 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 AT1G73 TAACCAAGAGCTTCAATTTGGGTCAGGGTACAACTTCTACAATCCCTCTGCAGTGTTTGTACATAACCAGGAAGACGACATTCTCCATACACAGATAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 TAACCAAGAGCTTCAATTTGGGTCAGGGTACAACTTCTACAATCCCTCTGCAGTGTTTGTACATAACCAGGAAGACGACATTCTCCATACACAGATAGAA 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 AT1G73 ATGAATACACAAGCACCACCTCACAACAGTGGGTTCGAGGAGGCCCCAGGAGGAGTACTTCAACCCCTTGGTTTACTCGGAAATGAAGACGGTGTAACAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 ATGAATACACAAGCACCACCTCACAACAGTGGGTTCGAGGAGGCCCCAGGAGGAGTACTTCAACCCCTTGGTTTACTCGGAAATGAAGACGGTGTAACAG 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 AT1G73 GGAGTGAGTTGCCTCAGTATCAGAGTGGCATTCTGTCTCCATTGACTGACTTGGACTTTGACTATGGTGGTTTTGGTGATGATTTCTCATGGTTTGGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 GGAGTGAGTTGCCTCAGTATCAGAGTGGCATTCTGTCTCCATTGACTGACTTGGACTTTGACTATGGTGGTTTTGGTGATGATTTCTCATGGTTTGGAGC 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 AT1G73 T : RE_111 T 10 20 30 40 50 60 70 80 90 100 AT1G73 MGDLAMSVADIRMENEPDDLASDNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 MGDLAMSVADIRMENEPDDLASDNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G73 CKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGNRNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 CKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGNRNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G73 PWWPTGNEEWWVKLGLPKSQSPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDNGNSNVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 PWWPTGNEEWWVKLGLPKSQSPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDNGNSNVTE 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G73 THRRGNNADRRKPVVNSDSDYDVDGTEEASGSVSSKDSRRNQIQKEQPTAISHSVRDQDKAEKHRRRKRPRIRSGTVNRQEEEQPEAQQRNILPDMNHVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 THRRGNNADRRKPVVNSDSDYDVDGTEEASGSVSSKDSRRNQIQKEQPTAISHSVRDQDKAEKHRRRKRPRIRSGTVNRQEEEQPEAQQRNILPDMNHVD 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G73 APLLEYNINGTHQEDDVVDPNIALGPEDNGLELVVPEFNNNYTYLPLVNEQTMMPVDERPMLYGPNPNQELQFGSGYNFYNPSAVFVHNQEDDILHTQIE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: RE_111 APLLEYNINGTHQEDDVVDPNIALGPEDNGLELVVPEFNNNYTYLPLVNEQTMMPVDERPMPYGPNPNQELQFGSGYNFYNPSAVFVHNQEDDILHTQIE 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 AT1G73 MNTQAPPHNSGFEEAPGGVLQPLGLLGNEDGVTGSELPQYQSGILSPLTDLDFDYGGFGDDFSWFGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_111 MNTQAPPHNSGFEEAPGGVLQPLGLLGNEDGVTGSELPQYQSGILSPLTDLDFDYGGFGDDFSWFGA 510 520 530 540 550 560

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