◆◆◆RE_1129 detail◆◆◆

Code name	RE_1129
Locus	AT2G36340
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_1129_1242bp ATGGTTGGTACGAAGAGAGTTGCTGATTCCATCGACACCAACTCGGATGACACACTCACGAGGAACCGTGAGGTTGAAGTTGAGGCGATGCTCAGTAGGA GAAAGCAACTAAGGACAACAACGACGAGGACAACAACGACGAGGACAACACCATTGAGCTTGTCTTCCTCTGCTTCAAAGATGAACTGGTCTAAAAACGA TGAGCTTGTCATTCTCGGGGGTATTGTGGACTATGAGAATGAAACGAAATTGAGCTATAGATCTGACTGGGATGCCTTGTACCGTTATATCAAAGATTGT GTAGAAGCAAAGTTTTCGAAGATTCAGCTCATCAATAAGGTCAAGAACATGAAGAGAAAGTTTACATACAATCAGGGGAGATCTAACCATGGGGAACAAC TTTCTTTTACTAATACTGATGATGATGAAATCTTCAAATTGTCATTGATCATATGGGACAAGAATGAATCAGAGTATGTTTCTAATGAGAATATAGACCA AGCTAAGGATGTTCCTTCTGGTGAGCCAGAGACTAATGATGTGCCTTGTGAGGAGCAAGACGATAGGGATGTGCCTTGTGAGGAGCAAGAGCGAGCGAAT ATCGAGATTGATAATGGTGTGAGAGAGAAATTGGACCAAGCCAAGGATGTTCCTTGTGTGGAGCAAGAGAGTGAGGATGTGCCTTGTGTGGAGCAAGAGC GGGTGAGTATAGAGATTGATAATGGTGAGAAAGAGAAATTGGACCAAACCATGGATTGTGAGGAGCAAGGGAATACGGATGTGCTTTGTGAGGAGAAAGG CGATAAGGATGTACCTTGTGAGGAGCAAGAGAATAAGGATGTGCCTTGTGAGGAGCAAGAGCGGGTGAGTATCGAGATTGATAATGGTGAGGAAGAGATG AGTAGCGAAGAAGATGGTGTGGATGAGGTAGGTGTTATGGAGGACACACTTGATTCTGGGATATCGTTTCAAGGTTTAGGTAAAAATGGTGTGAAAGACA AGAGTGAAGAAGATGATGTGGTTGAGTTGGGCGTTCTCCAGGAGATATTTAAGGAGGATACATTTTTTCAAAGTTTAGGTAGATATCAACAAAAATTGCT GCTTCAGAATTTGGAAAACGTTGGAGTTGAAAGAAGAAAAGAGCTCATCAACGAATGGAAGGCATTGTTTGTTGATGAGCAGCGATTGTGTGTCAAGAAA CTAACTTTCGCCGCAAAGCTTGCAAACTTAGGAGTTTCTCCT >RE_1129_translated MVGTKRVADSIDTNSDDTLTRNREVEVEAMLSRRKQLRTTTTRTTTTRTTPLSLSSSASKMNWSKNDELVILGGIVDYENETKLSYRSDWDALYRYIKDC VEAKFSKIQLINKVKNMKRKFTYNQGRSNHGEQLSFTNTDDDEIFKLSLIIWDKNESEYVSNENIDQAKDVPSGEPETNDVPCEEQDDRDVPCEEQERAN IEIDNGVREKLDQAKDVPCVEQESEDVPCVEQERVSIEIDNGEKEKLDQTMDCEEQGNTDVLCEEKGDKDVPCEEQENKDVPCEEQERVSIEIDNGEEEM SSEEDGVDEVGVMEDTLDSGISFQGLGKNGVKDKSEEDDVVELGVLQEIFKEDTFFQSLGRYQQKLLLQNLENVGVERRKELINEWKALFVDEQRLCVKK LTFAAKLANLGVSP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1240/1242 (99.8%)（アミノ酸配列で413/414 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G36 ATGGTTGGTACGAAGAGAGTTGCTGATTCCATCGACACCAACTCGGATGACACACTCACGAGGAACCGTGAGGTTGAAGTTGAGGCGATGCTCAGTAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 ATGGTTGGTACGAAGAGAGTTGCTGATTCCATCGACACCAACTCGGATGACACACTCACGAGGAACCGTGAGGTTGAAGTTGAGGCGATGCTCAGTAGGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G36 GAAAGCAACTAAGGACAACAACGACGAGGACAACAACGACGAGGACAACACCATTGAGCTTGTCTTCCTCTGCTTCAAAGATGAACTGGTCTAAAAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 GAAAGCAACTAAGGACAACAACGACGAGGACAACAACGACGAGGACAACACCATTGAGCTTGTCTTCCTCTGCTTCAAAGATGAACTGGTCTAAAAACGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G36 TGAGCTTGTCATTCTCGGGGGTATTGTGGACTATGAGAATGAAACGAAATTGAGCTATAGATCTGACTGGGATGCCTTGTACCGTTATATCAAAGATTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 TGAGCTTGTCATTCTCGGGGGTATTGTGGACTATGAGAATGAAACGAAATTGAGCTATAGATCTGACTGGGATGCCTTGTACCGTTATATCAAAGATTGT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G36 GTAGAAGCAAAGTTTTCGAAGATTCAGCTCATCAATAAGGTCAAGAACATGAAGAGAAAGTTTACATACAATCAGGGGAGATCTAACCATGGGGAACAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 GTAGAAGCAAAGTTTTCGAAGATTCAGCTCATCAATAAGGTCAAGAACATGAAGAGAAAGTTTACATACAATCAGGGGAGATCTAACCATGGGGAACAAC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G36 TTTCTTTTACTAATACTGATGATGATGAAATCTTCAAATTGTCATTGATCATATGGGACAAGAATGAATCAGAGTATGTTTCTAATGAGAATATAGACCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 TTTCTTTTACTAATACTGATGATGATGAAATCTTCAAATTGTCATTGATCATATGGGACAAGAATGAATCAGAGTATGTTTCTAATGAGAATATAGACCA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G36 AGCTAAGGATGTTCCTTCTGGTGAGCCAGAGACTAATGATGTGCCTTGTGAGGAGCAAGACGATAGGGATGTGCCTTGTGAGGAGCAAGAGCGAGCGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 AGCTAAGGATGTTCCTTCTGGTGAGCCAGAGACTAATGATGTGCCTTGTGAGGAGCAAGACGATAGGGATGTGCCTTGTGAGGAGCAAGAGCGAGCGAAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G36 ATCGAGATTGATAATGGTGTGAGAGAGAAATTGGACCAAGCCAAGGATGTTCCTTGTGTGGAGCAAGAGAGTGAGGATGTGCCTTGTGTGGAGCAAGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 ATCGAGATTGATAATGGTGTGAGAGAGAAATTGGACCAAGCCAAGGATGTTCCTTGTGTGGAGCAAGAGAGTGAGGATGTGCCTTGTGTGGAGCAAGAGC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G36 GGGTGAGTATAGAGATTGATAATGGTGAGAAAGAGAAATTGGACCAAACCATGGATTGTGAGGAGCAAGAGAATACGGATGTGCTTTGTGAGGAGAAAGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: RE_112 GGGTGAGTATAGAGATTGATAATGGTGAGAAAGAGAAATTGGACCAAACCATGGATTGTGAGGAGCAAGGGAATACGGATGTGCTTTGTGAGGAGAAAGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G36 CGATAAGGATGTACCTTGTGAGGAGCAAGAGAATAAGGATGTGCCTTGTGAGGAGCAAGAGCGGGTGAGTATCGAGATTGATAATGGTGAGGAAGAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 CGATAAGGATGTACCTTGTGAGGAGCAAGAGAATAAGGATGTGCCTTGTGAGGAGCAAGAGCGGGTGAGTATCGAGATTGATAATGGTGAGGAAGAGATG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G36 AGTAGCGAAGAAGATGGTGTGGATGAGGTAGGTGTTATGGAGGACACACTTGATTCTGGGATATCGTTTCAAGGTTTAGGTAAAAATGGTGTGAAAGACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 AGTAGCGAAGAAGATGGTGTGGATGAGGTAGGTGTTATGGAGGACACACTTGATTCTGGGATATCGTTTCAAGGTTTAGGTAAAAATGGTGTGAAAGACA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G36 AGAGTGAAGAAGATGATGTGGTTGAGTTGGGTGTTCTCCAGGAGATATTTAAGGAGGATACATTTTTTCAAAGTTTAGGTAGATATCAACAAAAATTGCT ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 AGAGTGAAGAAGATGATGTGGTTGAGTTGGGCGTTCTCCAGGAGATATTTAAGGAGGATACATTTTTTCAAAGTTTAGGTAGATATCAACAAAAATTGCT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT2G36 GCTTCAGAATTTGGAAAACGTTGGAGTTGAAAGAAGAAAAGAGCTCATCAACGAATGGAAGGCATTGTTTGTTGATGAGCAGCGATTGTGTGTCAAGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 GCTTCAGAATTTGGAAAACGTTGGAGTTGAAAGAAGAAAAGAGCTCATCAACGAATGGAAGGCATTGTTTGTTGATGAGCAGCGATTGTGTGTCAAGAAA 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 AT2G36 CTAACTTTCGCCGCAAAGCTTGCAAACTTAGGAGTTTCTCCT :::::::::::::::::::::::::::::::::::::::::: RE_112 CTAACTTTCGCCGCAAAGCTTGCAAACTTAGGAGTTTCTCCT 1210 1220 1230 1240 10 20 30 40 50 60 70 80 90 100 AT2G36 MVGTKRVADSIDTNSDDTLTRNREVEVEAMLSRRKQLRTTTTRTTTTRTTPLSLSSSASKMNWSKNDELVILGGIVDYENETKLSYRSDWDALYRYIKDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 MVGTKRVADSIDTNSDDTLTRNREVEVEAMLSRRKQLRTTTTRTTTTRTTPLSLSSSASKMNWSKNDELVILGGIVDYENETKLSYRSDWDALYRYIKDC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G36 VEAKFSKIQLINKVKNMKRKFTYNQGRSNHGEQLSFTNTDDDEIFKLSLIIWDKNESEYVSNENIDQAKDVPSGEPETNDVPCEEQDDRDVPCEEQERAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 VEAKFSKIQLINKVKNMKRKFTYNQGRSNHGEQLSFTNTDDDEIFKLSLIIWDKNESEYVSNENIDQAKDVPSGEPETNDVPCEEQDDRDVPCEEQERAN 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G36 IEIDNGVREKLDQAKDVPCVEQESEDVPCVEQERVSIEIDNGEKEKLDQTMDCEEQENTDVLCEEKGDKDVPCEEQENKDVPCEEQERVSIEIDNGEEEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: RE_112 IEIDNGVREKLDQAKDVPCVEQESEDVPCVEQERVSIEIDNGEKEKLDQTMDCEEQGNTDVLCEEKGDKDVPCEEQENKDVPCEEQERVSIEIDNGEEEM 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G36 SSEEDGVDEVGVMEDTLDSGISFQGLGKNGVKDKSEEDDVVELGVLQEIFKEDTFFQSLGRYQQKLLLQNLENVGVERRKELINEWKALFVDEQRLCVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_112 SSEEDGVDEVGVMEDTLDSGISFQGLGKNGVKDKSEEDDVVELGVLQEIFKEDTFFQSLGRYQQKLLLQNLENVGVERRKELINEWKALFVDEQRLCVKK 310 320 330 340 350 360 370 380 390 400 410 AT2G36 LTFAAKLANLGVSP :::::::::::::: RE_112 LTFAAKLANLGVSP 410

このページのTOPに戻る