◆◆◆RE_1131 detail◆◆◆

Code name	RE_1131
Locus	AT4G00270
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0520_third_1131_FR_55
sequence	>RE_1131_906bp ATGGTGACTCCGAAGCAGATCGATTTCTCTTCCTGTGTTGGTGCTGATAACTCCAACGGTACCCTCTCCCATCGAAGATCTCCACGGAATATTCCTTCCT CAAAGCGTGCTGCTTCCGTCGCAGAAGAAGAGACTATGAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAATTGGATCCGCCGTTGATCGTCCGGAT CTGGAACGAGGAAGATGAGCTCTCTATCTTAAAGGGGTTAGTTGATTACAGAGCTAAGACAGGATTCAATCCCAAAATTGATTGGGATGCGTTTTGTAGT TTCCTCGGAAGTTCTATCGTTGAGAGATTCTCCAAGGATCAGGTTTTGAGTAAAATCAGGAAGTTGAAAAGGAGGTTTCATGTTCACTCGGAGAAAATCA ATCAAGGGAATGATCCCAAATTTACTAGGTCTAGTGATTCTGAAGCCTTTGGGTTTTCTTCGATGATTTGGGGACAAGGTGATGATGATGGTATGGATAA GGAGCACGAGGTAAACGGAAATGGTGCAGCGGAAAACCGGACTAACGAGAGCGGGGAGGAGATGTTGAAGGAGCACGAGGAGGAAGTGGCTAATACTGAA CTTTTAAATGAGAATGAGGCAGCCAAAACAACAGAGAATGGGACTAGTAGTGGAAAAGAGAGACATGATGAGGACAATGATGATGATGATGAGTTATGCG CGGTGCAGGATGCATTTGAGGCGGTGATGTCGCAAGGTTTAAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAAATGGTAAAAG AAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAGGAAACAAGATTCAATATCAAGAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTAAT GATAGT >RE_1131_translated MVTPKQIDFSSCVGADNSNGTLSHRRSPRNIPSSKRAASVAEEETMKKKMKMKKKKKKLDPPLIVRIWNEEDELSILKGLVDYRAKTGFNPKIDWDAFCS FLGSSIVERFSKDQVLSKIRKLKRRFHVHSEKINQGNDPKFTRSSDSEAFGFSSMIWGQGDDDGMDKEHEVNGNGAAENRTNESGEEMLKEHEEEVANTE LLNENEAAKTTENGTSSGKERHDEDNDDDDELCAVQDAFEAVMSQGLSGYQKKLQLEKLMNLGNGKRRELSDEWKALCVEETRFNIKKLRFSAKLAEAAN DS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 905/906 (99.9%)（アミノ酸配列で301/302 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G00 ATGGTGACTCCGAAGCAGATCGATTTCTCTTCCTGTGTTGGTGCTGATAACTCCAACGGTACCCTCTCCCATCGAAGATCTCCACGGAATATTCCTTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 ATGGTGACTCCGAAGCAGATCGATTTCTCTTCCTGTGTTGGTGCTGATAACTCCAACGGTACCCTCTCCCATCGAAGATCTCCACGGAATATTCCTTCCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G00 CAAAGCGTGCTGCTTCCGTCGCAGAAGAAGAGACTATGAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAATTGGATCCGCCGTTGATCGTCCGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CAAAGCGTGCTGCTTCCGTCGCAGAAGAAGAGACTATGAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAATTGGATCCGCCGTTGATCGTCCGGAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G00 CTGGAACGAGGAAGATGAGCTCTCTATCTTAAAGGGGTTAGTTGATTACAGAGCTAAGACAGGATTCAATCCCAAAATTGATTGGGATGCGTTTTGTAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CTGGAACGAGGAAGATGAGCTCTCTATCTTAAAGGGGTTAGTTGATTACAGAGCTAAGACAGGATTCAATCCCAAAATTGATTGGGATGCGTTTTGTAGT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G00 TTCCTCGGAAGTTCTATCGTTGAGAGATTCTCCAAGGATCAGGTTTTGAGTAAAATCAGGAAGTTGAAAAGGAGGTTTCATGTTCACTCGGAGAAAATCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 TTCCTCGGAAGTTCTATCGTTGAGAGATTCTCCAAGGATCAGGTTTTGAGTAAAATCAGGAAGTTGAAAAGGAGGTTTCATGTTCACTCGGAGAAAATCA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G00 ATCAAGGGAATGATCCCAAATTTACTAGGTCTAGTGATTCTGAAGCCTTTGGGTTTTCTTCGATGATTTGGGGACAAGGTGATGATGATGGTATGGATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 ATCAAGGGAATGATCCCAAATTTACTAGGTCTAGTGATTCTGAAGCCTTTGGGTTTTCTTCGATGATTTGGGGACAAGGTGATGATGATGGTATGGATAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G00 GGAGCACGAGGTAAACGGAAATGGTGCAGCGGAAAACCGGACTAACGAGAGCGGGGAGGAGATGTTGAAGGAGCACGAGGAGGAAGTGGCTAATACTGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 GGAGCACGAGGTAAACGGAAATGGTGCAGCGGAAAACCGGACTAACGAGAGCGGGGAGGAGATGTTGAAGGAGCACGAGGAGGAAGTGGCTAATACTGAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G00 CTTTTAAATGAGAATGGGGCAGCCAAAACAACAGAGAATGGGACTAGTAGTGGAAAAGAGAGACATGATGAGGACAATGATGATGATGATGAGTTATGCG :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CTTTTAAATGAGAATGAGGCAGCCAAAACAACAGAGAATGGGACTAGTAGTGGAAAAGAGAGACATGATGAGGACAATGATGATGATGATGAGTTATGCG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G00 CGGTGCAGGATGCATTTGAGGCGGTGATGTCGCAAGGTTTAAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAAATGGTAAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CGGTGCAGGATGCATTTGAGGCGGTGATGTCGCAAGGTTTAAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAAATGGTAAAAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G00 AAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAGGAAACAAGATTCAATATCAAGAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 AAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAGGAAACAAGATTCAATATCAAGAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTAAT 810 820 830 840 850 860 870 880 890 900 AT4G00 GATAGT :::::: RE_113 GATAGT 10 20 30 40 50 60 70 80 90 100 AT4G00 MVTPKQIDFSSCVGADNSNGTLSHRRSPRNIPSSKRAASVAEEETMKKKMKMKKKKKKLDPPLIVRIWNEEDELSILKGLVDYRAKTGFNPKIDWDAFCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 MVTPKQIDFSSCVGADNSNGTLSHRRSPRNIPSSKRAASVAEEETMKKKMKMKKKKKKLDPPLIVRIWNEEDELSILKGLVDYRAKTGFNPKIDWDAFCS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G00 FLGSSIVERFSKDQVLSKIRKLKRRFHVHSEKINQGNDPKFTRSSDSEAFGFSSMIWGQGDDDGMDKEHEVNGNGAAENRTNESGEEMLKEHEEEVANTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 FLGSSIVERFSKDQVLSKIRKLKRRFHVHSEKINQGNDPKFTRSSDSEAFGFSSMIWGQGDDDGMDKEHEVNGNGAAENRTNESGEEMLKEHEEEVANTE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G00 LLNENGAAKTTENGTSSGKERHDEDNDDDDELCAVQDAFEAVMSQGLSGYQKKLQLEKLMNLGNGKRRELSDEWKALCVEETRFNIKKLRFSAKLAEAAN ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 LLNENEAAKTTENGTSSGKERHDEDNDDDDELCAVQDAFEAVMSQGLSGYQKKLQLEKLMNLGNGKRRELSDEWKALCVEETRFNIKKLRFSAKLAEAAN 210 220 230 240 250 260 270 280 290 300 AT4G00 DS :: RE_113 DS

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