◆◆◆RE_1137 detail◆◆◆

Code name	RE_1137
Locus	AT2G36400
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.50%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_1137_1194bp ATGGATTTGCAACTGAAACAATGGAGAAGCCAGCAGCAGCAACAACATCAGACAGAGTCAGAAGAACAACCTTCTGCAGCTAAGATACCAAAACATGTCT TTGACCAGATTCATTCTCACACTGCAACTTCTACTGCTCTTCCTCTCTTTACCCCTGAGCCTACTTCTTCTAAACTCTCCTCTTTGTCTCCTGATTCTTC CTCCAGGTTCCCCAAGATGGGGAGCTTCTTTAGCTGGGCACAGTGGCAAGAACTTGAACTACAAGCTCTGATCTACAGGTACATGTTGGCTGGTGCTGCT GTTCCTCAGGAGCTCCTTTTACCAATCAAGAAAAGCCTTCTCCATCTATCTCCTTCCTACTTTCTTCACCATCCTCTTCAACACCTACCTCATTACCAAC CTGCTTGGTATTTGGGAAGGGCAGCGATGGATCCTGAGCCAGGCAGATGCAGGAGAACGGATGGTAAGAAGTGGAGATGTTCAAGAGACGTCTTCGCTGG CCACAAGTATTGCGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAAACTCCAACCACCGTCAATGCAACTGCCACGTCCATGGCT TCATCAGTAGCAGCCGCAGCCACCATTACAACAGCAACAACAACATCTACGTTTGCTTTTGGTGGTGGTGGTGGTAGTGAGGAAGTGGTTGGTCAAGGAG GATCTTTCTTCTTCTCTGGCTCTTCTAACTCTTCATCTGAACTTCTCCACCTTAGTCAAAGTTGTTCGGAGATGAAGCAAGAAAGCAACAACATGAACAA CAAGAGGCCATACGAGTCCCACATCGGATTCAGTAACAACAGATCAGATGGAGGACACATCCTGAGGCCCTTCTTTGACGATTGGCCTCGTTCTTCGCTC CAAGAAGCTGACAATAGTTCAAGCCCCATGAGCTCAGCCACTTGTCTCTCCATCTCCATGCCCGGGAACTCTTCCTCAGACGTCTCTCTGAAGCTGTCCA CAGGCAACGAAGAGGGAGCCCGGAGCAACAACAATGGGAGAGATCAGCAAAACATGAGCTGGTGGAGCGGTGGAGGTTCCAACCACCATCATCACAACAT GGGCGGACCATTGGCCGAAGCCCTGAGATCTTCTTCCTCATCTTCCCCAACCAGTGTTCTCCATCAGCTTGGTGTCTCGACACAAGCCGTTCAT >RE_1137_translated MDLQLKQWRSQQQQQHQTESEEQPSAAKIPKHVFDQIHSHTATSTALPLFTPEPTSSKLSSLSPDSSSRFPKMGSFFSWAQWQELELQALIYRYMLAGAA VPQELLLPIKKSLLHLSPSYFLHHPLQHLPHYQPAWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNATATSMA SSVAAAATITTATTTSTFAFGGGGGSEEVVGQGGSFFFSGSSNSSSELLHLSQSCSEMKQESNNMNNKRPYESHIGFSNNRSDGGHILRPFFDDWPRSSL QEADNSSSPMSSATCLSISMPGNSSSDVSLKLSTGNEEGARSNNNGRDQQNMSWWSGGGSNHHHHNMGGPLAEALRSSSSSSPTSVLHQLGVSTQAVH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1192/1194 (99.8%)（アミノ酸配列で396/398 (99.5%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G36 ATGGATTTGCAACTGAAACAATGGAGAAGCCAGCAGCAGCAACAACATCAGACAGAGTCAGAAGAACAACCTTCTGCAGCTAAGATACCAAAACATGTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 ATGGATTTGCAACTGAAACAATGGAGAAGCCAGCAGCAGCAACAACATCAGACAGAGTCAGAAGAACAACCTTCTGCAGCTAAGATACCAAAACATGTCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G36 TTGACCAGATTCATTCTCACACTGCAACTTCTACTGCTCTTCCTCTCTTTACCCCTGAGCCTACTTCTTCTAAACTCTCCTCTTTGTCTCCTGATTCTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 TTGACCAGATTCATTCTCACACTGCAACTTCTACTGCTCTTCCTCTCTTTACCCCTGAGCCTACTTCTTCTAAACTCTCCTCTTTGTCTCCTGATTCTTC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G36 CTCCAGGTTCCCCAAGATGGGGAGCTTCTTTAGCTGGGCACAGTGGCAAGAACTTGAACTACAAGCTCTGATCTACAGGTACATGTTGGCTGGTGCTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CTCCAGGTTCCCCAAGATGGGGAGCTTCTTTAGCTGGGCACAGTGGCAAGAACTTGAACTACAAGCTCTGATCTACAGGTACATGTTGGCTGGTGCTGCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G36 GTTCCTCAGGAGCTCCTTTTACCAATCAAGAAAAGCCTTCTCCATCTATCTCCTTCCTACTTTCTTCACCATCCTCTTCAACACCTACCTCATTACCAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 GTTCCTCAGGAGCTCCTTTTACCAATCAAGAAAAGCCTTCTCCATCTATCTCCTTCCTACTTTCTTCACCATCCTCTTCAACACCTACCTCATTACCAAC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G36 CTGCTTGGTATTTGGGAAGGGCAGCGATGGATCCTGAGCCAGGCAGATGCAGGAGAACGGATGGTAAGAAGTGGAGATGTTCAAGAGACGTCTTCGCTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CTGCTTGGTATTTGGGAAGGGCAGCGATGGATCCTGAGCCAGGCAGATGCAGGAGAACGGATGGTAAGAAGTGGAGATGTTCAAGAGACGTCTTCGCTGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G36 CCACAAGTATTGCGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAAACTCCAACCACCGTCAATGCAACTGCCACGTCCATGGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CCACAAGTATTGCGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAAACTCCAACCACCGTCAATGCAACTGCCACGTCCATGGCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G36 TCATCAGTAGCAGCCGCAGCCACCACTACAACAGCAACAACAACATCTACGTTTGCTTTTGGTGGTGGTGGTGGTAGTGAGGAAGTGGTTGGTCAAGGAG ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 TCATCAGTAGCAGCCGCAGCCACCATTACAACAGCAACAACAACATCTACGTTTGCTTTTGGTGGTGGTGGTGGTAGTGAGGAAGTGGTTGGTCAAGGAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G36 GATCTTTCTTCTTCTCTGGCTCTTCTAACTCTTCATCTGAACTTCTCCACCTTAGTCAAAGTTGTTCGGAGATGAAGCAAGAAAGCAACAACATGAACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 GATCTTTCTTCTTCTCTGGCTCTTCTAACTCTTCATCTGAACTTCTCCACCTTAGTCAAAGTTGTTCGGAGATGAAGCAAGAAAGCAACAACATGAACAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G36 CAAGAGGCCATACGAGTCCCACATCGGATTCAGTAACAACAGATCAGATGGAGGACACATCCTGAGGCCCTTCTTTGACGATTGGCCTCGTTCTTCGCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CAAGAGGCCATACGAGTCCCACATCGGATTCAGTAACAACAGATCAGATGGAGGACACATCCTGAGGCCCTTCTTTGACGATTGGCCTCGTTCTTCGCTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G36 CAAGAAGCTGACAATAGTTCAAGCCCCATGAGCTCAGCCACTTGTCTCTCCATCTCCATGCCCGGGAACTCTTCCTCAGACGTCTCTCTGAAGCTGTCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CAAGAAGCTGACAATAGTTCAAGCCCCATGAGCTCAGCCACTTGTCTCTCCATCTCCATGCCCGGGAACTCTTCCTCAGACGTCTCTCTGAAGCTGTCCA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G36 CAGGCAACGAAGAGGGAGCCCGGAGCAACAACAATGGGAGAGATCAGCAAAACATGAGCTGGTGGAGCGGTGGAGGTTCCAACCACCATCATCACAACAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 CAGGCAACGAAGAGGGAGCCCGGAGCAACAACAATGGGAGAGATCAGCAAAACATGAGCTGGTGGAGCGGTGGAGGTTCCAACCACCATCATCACAACAT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 AT2G36 GGGCGGACCATTGGCCGAAGCCCTGAGATCTTCTTCCTCATCTTCCCCAACCAGTGTTCTCCATCAGCTTGGTGTCTCGACACAAGCCTTTCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: RE_113 GGGCGGACCATTGGCCGAAGCCCTGAGATCTTCTTCCTCATCTTCCCCAACCAGTGTTCTCCATCAGCTTGGTGTCTCGACACAAGCCGTTCAT 1110 1120 1130 1140 1150 1160 1170 1180 1190 10 20 30 40 50 60 70 80 90 100 AT2G36 MDLQLKQWRSQQQQQHQTESEEQPSAAKIPKHVFDQIHSHTATSTALPLFTPEPTSSKLSSLSPDSSSRFPKMGSFFSWAQWQELELQALIYRYMLAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 MDLQLKQWRSQQQQQHQTESEEQPSAAKIPKHVFDQIHSHTATSTALPLFTPEPTSSKLSSLSPDSSSRFPKMGSFFSWAQWQELELQALIYRYMLAGAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G36 VPQELLLPIKKSLLHLSPSYFLHHPLQHLPHYQPAWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNATATSMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 VPQELLLPIKKSLLHLSPSYFLHHPLQHLPHYQPAWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNATATSMA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G36 SSVAAAATTTTATTTSTFAFGGGGGSEEVVGQGGSFFFSGSSNSSSELLHLSQSCSEMKQESNNMNNKRPYESHIGFSNNRSDGGHILRPFFDDWPRSSL :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_113 SSVAAAATITTATTTSTFAFGGGGGSEEVVGQGGSFFFSGSSNSSSELLHLSQSCSEMKQESNNMNNKRPYESHIGFSNNRSDGGHILRPFFDDWPRSSL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT2G36 QEADNSSSPMSSATCLSISMPGNSSSDVSLKLSTGNEEGARSNNNGRDQQNMSWWSGGGSNHHHHNMGGPLAEALRSSSSSSPTSVLHQLGVSTQAFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : RE_113 QEADNSSSPMSSATCLSISMPGNSSSDVSLKLSTGNEEGARSNNNGRDQQNMSWWSGGGSNHHHHNMGGPLAEALRSSSSSSPTSVLHQLGVSTQAVH 310 320 330 340 350 360 370 380 390

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