◆◆◆RE_1203 detail◆◆◆

Code name	RE_1203
Locus	AT1G66500
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0318_アミノ酸配列100%一致
sequence	>RE_1203_1248bp ATGGCATCAAACGGATCTTTCTCTGCTCAGAGAAACGCAAACGCTAGAACAACGATGAAGAGAAGAAGCGACAATCGCGGTTACGGTGGCGGAATCGGAG GTTATCAAGAGGAGACGAACCGTTACGCGCCGCCGCAAAAACGTTTCAGATCACAAGCGCAACAGCAATTCCGATCTGGTCATAATCCTCTGTATCATCA TCATGGTAGTAATAATAATAACGTGTCTAGGGTTTCTTCTCAATCATATAACAATTGCGGTGTTGATGTGATTGCTTCTAATTCAAGTTTTGCATTACGT AACAATGATTCTAACACCAACAATTATCAGAAACCCTTTGTTGCTGGTTATGGAAACCCTAATCCCCAAATTGTTCCTCTTCCATTACCTTATCGTAAGC TTGATGACAATCTCTCTTTAGATTCGTTACCTGATTGGGTTCCGAATTCAAGAACCCTAACTCCGAATTATCCTGTTAGGTCATCGAATTTTGTACCAAA CACTCCTGTTTTTACGAATGTTCAAAATCCGATGAATCATTCGAACATGGTTTCAGTTGTGTCTCAATCTATGCATCAACCAATTGTTTTGAGCAAAGAA TTGACTGATTTGCTTAGTCTTCTTAACAACGAGAAAGAGAAGAAAACTTTAGAAGCAAGTAATAGCGATTCTTTGCCTGTTGGATTAAGCTTTGATAATC CATCGTCACTTAATGTTCGACATGAATCTGTGATTAAGTCTCTGTATTCTGATATGCCGAGACAATGTTCATCGTGTGGGTTGAGATTCAAGTGTCAAGA AGAGCATAGTAAACACATGGATTGGCATGTAAGGAAGAACAGGTCGGTGAAAACCACTACAAGACTGGGTCAGCAACCGAAGAAATCGAGGGGATGGTTA GCAAGTGCATCTTTATGGCTTTGTGCAGCGACGGGAGGAGAGACGGTAGAAGTAGCATCTTTTGGAGGAGAAATGCAGAAGAAGAAAGGAAAGGACGAAG AACCAAAACAACTCATGGTGCCTGCGGATGAAGATCAGAAGAATTGCGCATTATGCGTAGAGCCGTTTGAAGAGTTCTTTAGCCATGAAGATGATGATTG GATGTATAAAGATGCAGTCTACTTAACCAAGAATGGTCGTATAGTTCATGTTAAGTGTATGCCTGAACCCCGACCTGCTAAGGATTTGAGAGAGCCTTCG AGGGTAATGTCTGTTACAGTTCCATCGGTTGCGAAAGCTATAGCCTGC >RE_1203_translated MASNGSFSAQRNANARTTMKRRSDNRGYGGGIGGYQEETNRYAPPQKRFRSQAQQQFRSGHNPLYHHHGSNNNNVSRVSSQSYNNCGVDVIASNSSFALR NNDSNTNNYQKPFVAGYGNPNPQIVPLPLPYRKLDDNLSLDSLPDWVPNSRTLTPNYPVRSSNFVPNTPVFTNVQNPMNHSNMVSVVSQSMHQPIVLSKE LTDLLSLLNNEKEKKTLEASNSDSLPVGLSFDNPSSLNVRHESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWL ASASLWLCAATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVEPFEEFFSHEDDDWMYKDAVYLTKNGRIVHVKCMPEPRPAKDLREPS RVMSVTVPSVAKAIAC
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1246/1248 (99.8%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G66 ATGGCATCAAACGGATCTTTCTCTGCTCAGAGAAACGCAAACGCTAGAACAACGATGAAGAGAAGAAGCGACAATCGCGGTTACGGTGGCGGAATCGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 ATGGCATCAAACGGATCTTTCTCTGCTCAGAGAAACGCAAACGCTAGAACAACGATGAAGAGAAGAAGCGACAATCGCGGTTACGGTGGCGGAATCGGAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G66 GTTATCAAGAGGAGACGAACCGTTACGCGCCGCCGCAAAAACGTTTCAGATCACAAGCGCAACAGCAATTCCGATCTGGTCATAATCCTCTGTATCATCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 GTTATCAAGAGGAGACGAACCGTTACGCGCCGCCGCAAAAACGTTTCAGATCACAAGCGCAACAGCAATTCCGATCTGGTCATAATCCTCTGTATCATCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G66 TCATGGTAGTAATAATAATAACGTGTCTAGGGTTTCTTCTCAATCATATAACAATTGCGGTGTTGATGTGATTGCTTCTAATTCAAGTTTTGCATTACGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 TCATGGTAGTAATAATAATAACGTGTCTAGGGTTTCTTCTCAATCATATAACAATTGCGGTGTTGATGTGATTGCTTCTAATTCAAGTTTTGCATTACGT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G66 AACAATGATTCTAACACCAACAATTATCAGAAACCCTTTGTTGCTGGTTATGGAAACCCTAATCCCCAAATTGTTCCTCTTCCATTACCTTATCGTAAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 AACAATGATTCTAACACCAACAATTATCAGAAACCCTTTGTTGCTGGTTATGGAAACCCTAATCCCCAAATTGTTCCTCTTCCATTACCTTATCGTAAGC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G66 TTGATGACAATCTCTCTTTAGATTCGTTACCTGATTGGGTTCCGAATTCAAGAACCCTAACTCCGAATTATCCTGTTAGGTCATCGAATTTTGTACCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 TTGATGACAATCTCTCTTTAGATTCGTTACCTGATTGGGTTCCGAATTCAAGAACCCTAACTCCGAATTATCCTGTTAGGTCATCGAATTTTGTACCAAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G66 CACTCCTGTTTTTACGAATGTTCAAAATCCGATGAATCATTCGAACATGGTTTCAGTTGTGTCTCAATCTATGCATCAACCAATTGTTTTGAGCAAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 CACTCCTGTTTTTACGAATGTTCAAAATCCGATGAATCATTCGAACATGGTTTCAGTTGTGTCTCAATCTATGCATCAACCAATTGTTTTGAGCAAAGAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G66 TTGACTGATTTGCTTAGTCTTCTTAACAATGAGAAAGAGAAGAAAACTTTAGAAGCAAGTAATAGTGATTCTTTGCCTGTTGGATTAAGCTTTGATAATC ::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: RE_120 TTGACTGATTTGCTTAGTCTTCTTAACAACGAGAAAGAGAAGAAAACTTTAGAAGCAAGTAATAGCGATTCTTTGCCTGTTGGATTAAGCTTTGATAATC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G66 CATCGTCACTTAATGTTCGACATGAATCTGTGATTAAGTCTCTGTATTCTGATATGCCGAGACAATGTTCATCGTGTGGGTTGAGATTCAAGTGTCAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 CATCGTCACTTAATGTTCGACATGAATCTGTGATTAAGTCTCTGTATTCTGATATGCCGAGACAATGTTCATCGTGTGGGTTGAGATTCAAGTGTCAAGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G66 AGAGCATAGTAAACACATGGATTGGCATGTAAGGAAGAACAGGTCGGTGAAAACCACTACAAGACTGGGTCAGCAACCGAAGAAATCGAGGGGATGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 AGAGCATAGTAAACACATGGATTGGCATGTAAGGAAGAACAGGTCGGTGAAAACCACTACAAGACTGGGTCAGCAACCGAAGAAATCGAGGGGATGGTTA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G66 GCAAGTGCATCTTTATGGCTTTGTGCAGCGACGGGAGGAGAGACGGTAGAAGTAGCATCTTTTGGAGGAGAAATGCAGAAGAAGAAAGGAAAGGACGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 GCAAGTGCATCTTTATGGCTTTGTGCAGCGACGGGAGGAGAGACGGTAGAAGTAGCATCTTTTGGAGGAGAAATGCAGAAGAAGAAAGGAAAGGACGAAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G66 AACCAAAACAACTCATGGTGCCTGCGGATGAAGATCAGAAGAATTGCGCATTATGCGTAGAGCCGTTTGAAGAGTTCTTTAGCCATGAAGATGATGATTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 AACCAAAACAACTCATGGTGCCTGCGGATGAAGATCAGAAGAATTGCGCATTATGCGTAGAGCCGTTTGAAGAGTTCTTTAGCCATGAAGATGATGATTG 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G66 GATGTATAAAGATGCAGTCTACTTAACCAAGAATGGTCGTATAGTTCATGTTAAGTGTATGCCTGAACCCCGACCTGCTAAGGATTTGAGAGAGCCTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 GATGTATAAAGATGCAGTCTACTTAACCAAGAATGGTCGTATAGTTCATGTTAAGTGTATGCCTGAACCCCGACCTGCTAAGGATTTGAGAGAGCCTTCG 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 AT1G66 AGGGTAATGTCTGTTACAGTTCCATCGGTTGCGAAAGCTATAGCCTGC :::::::::::::::::::::::::::::::::::::::::::::::: RE_120 AGGGTAATGTCTGTTACAGTTCCATCGGTTGCGAAAGCTATAGCCTGC 1210 1220 1230 1240 10 20 30 40 50 60 70 80 90 100 AT1G66 MASNGSFSAQRNANARTTMKRRSDNRGYGGGIGGYQEETNRYAPPQKRFRSQAQQQFRSGHNPLYHHHGSNNNNVSRVSSQSYNNCGVDVIASNSSFALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 MASNGSFSAQRNANARTTMKRRSDNRGYGGGIGGYQEETNRYAPPQKRFRSQAQQQFRSGHNPLYHHHGSNNNNVSRVSSQSYNNCGVDVIASNSSFALR 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G66 NNDSNTNNYQKPFVAGYGNPNPQIVPLPLPYRKLDDNLSLDSLPDWVPNSRTLTPNYPVRSSNFVPNTPVFTNVQNPMNHSNMVSVVSQSMHQPIVLSKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 NNDSNTNNYQKPFVAGYGNPNPQIVPLPLPYRKLDDNLSLDSLPDWVPNSRTLTPNYPVRSSNFVPNTPVFTNVQNPMNHSNMVSVVSQSMHQPIVLSKE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G66 LTDLLSLLNNEKEKKTLEASNSDSLPVGLSFDNPSSLNVRHESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 LTDLLSLLNNEKEKKTLEASNSDSLPVGLSFDNPSSLNVRHESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G66 ASASLWLCAATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVEPFEEFFSHEDDDWMYKDAVYLTKNGRIVHVKCMPEPRPAKDLREPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_120 ASASLWLCAATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVEPFEEFFSHEDDDWMYKDAVYLTKNGRIVHVKCMPEPRPAKDLREPS 310 320 330 340 350 360 370 380 390 400 410 AT1G66 RVMSVTVPSVAKAIAC :::::::::::::::: RE_120 RVMSVTVPSVAKAIAC 410

このページのTOPに戻る