◆◆◆RE_1275 detail◆◆◆

Code name	RE_1275
Locus	AT1G25280
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0318_アミノ酸配列70%以上一致
sequence	>RE_1275_1335bp ATGTCGTTTCGAGGCATTGTTCAAGATTTGAGAGATGGGTTTGGGAGCTTGTCAAGGAGGAGTTTCGATTTTAGGCTCTCGAGTCTTCATAAAGGGAAAG CTCAGGGTTCTTCGTTCCGTGAGTATTCGTCATCCCGTGATCTCTTGTCGCCTGTGATAGTTCAGACAAGTAGATGGGCTAATCTTCCTCCAGAGTTACT CTTTGATGTGATCAAAAGATTAGAGGAAAGTGAGAGTAATTGGCCTGCAAGAAAACATGTTGTGGCTTGTGCTTCGGTTTGTCGGTCTTGGAGAGCTATG TGCCAAGAGATTGTTTTGGGGCCTGAAATCTGTGGGAAACTCACTTTCCCTGTTTCCCTCAAACAGCCAGGGCCTCGTGATGCAATGATTCAGTGTTTCA TCAAAAGGGATAAATCAAAGCTAACATTTCACCTTTTTCTTTGTTTAAGTCCCGCTCTATTAGTGGAGAATGGGAAATTTCTTCTTTCAGCTAAAAGAAC TCGTAGAACTACTCGAACCGAGTACATTATCTCCATGGATGCCGATAACATCTCAAGATCCAGCAACTCTTACCTCGGAAAGCTCAGATCAAACTTCCTT GGGACAAAGTTCTTGGTGTACGACACGCAACCACCACCAAACACATCTTCGAGCGCACTTATCACTGATCGAACAAGCCGAGGCAGGTTTCACTCCAGAC GAGTTTCTCCTAAAGTACCATCCGGAAGCTACAACATTGCTCAAATCACCTATGAGCTCAACGTGTTGGGCACACGCGGGCCACGACGAATGCACTGCAT CATGAACTCCATCCCAATTTCATCGCTCGAACCAGGCGGTTCAGTCCCTAACCAACCCGAGAAACTCGTCCCTGCACCATACTCTCTCGACGACTCATTC CGCAGTAACATCTCCTTCTCCAAATCATCATTTGACCACCGCTCCCTCGATTTCAGCAGTTCTAGATTCTCCGAAATGGGAATATCCTGCGACGACAACG AAGAAGAAGCGAGTTTCAGACCGTTGATTCTAAAGAACAAGCAGCCAAGGTGGCACGAGCAGTTGCAATGCTGGTGTTTGAATTTCCGCGGACGTGTGAC AGTTGCATCGGTTAAGAATTTCCAGCTTGTAGCAGCAAGACAGCCGCAGCCTCAAGGGACAGGTGCAGCAGCAGCACCAACAAGTGCACCTGCTCACCCT GAGCAAGACAAGGTGATTCTCCAGTTTGGTAAAGTAGGGAAAGATATGTTCACAATGGACTATAGGTATCCATTATCGGCGTTTCAGGCGTTTGCGATAT GCTTAAGCAGCTTTGACACCAAGCTTGCTTGTGAA >RE_1275_translated MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAM CQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFL GTKFLVYDTQPPPNTSSSALITDRTSRGRFHSRRVSPKVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHP EQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1333/1335 (99.9%)（アミノ酸配列で444/445 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G25 ATGTCGTTTCGAGGCATTGTTCAAGATTTGAGAGATGGGTTTGGGAGCTTGTCAAGGAGGAGTTTCGATTTTAGGCTCTCGAGTCTTCATAAAGGGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 ATGTCGTTTCGAGGCATTGTTCAAGATTTGAGAGATGGGTTTGGGAGCTTGTCAAGGAGGAGTTTCGATTTTAGGCTCTCGAGTCTTCATAAAGGGAAAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G25 CTCAGGGTTCTTCGTTCCGTGAGTATTCGTCATCCCGTGATCTCTTGTCGCCTGTGATAGTTCAGACAAGTAGATGGGCTAATCTTCCTCCAGAGTTACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 CTCAGGGTTCTTCGTTCCGTGAGTATTCGTCATCCCGTGATCTCTTGTCGCCTGTGATAGTTCAGACAAGTAGATGGGCTAATCTTCCTCCAGAGTTACT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G25 CTTTGATGTGATCAAAAGATTAGAGGAAAGTGAGAGTAATTGGCCTGCAAGAAAACATGTTGTGGCTTGTGCTTCGGTTTGTCGGTCTTGGAGAGCTATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 CTTTGATGTGATCAAAAGATTAGAGGAAAGTGAGAGTAATTGGCCTGCAAGAAAACATGTTGTGGCTTGTGCTTCGGTTTGTCGGTCTTGGAGAGCTATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G25 TGCCAAGAGATTGTTTTGGGGCCTGAAATCTGTGGGAAACTCACTTTCCCTGTTTCCCTCAAACAGCCAGGGCCTCGTGATGCAATGATTCAGTGTTTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 TGCCAAGAGATTGTTTTGGGGCCTGAAATCTGTGGGAAACTCACTTTCCCTGTTTCCCTCAAACAGCCAGGGCCTCGTGATGCAATGATTCAGTGTTTCA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G25 TCAAAAGGGATAAATCAAAGCTAACATTTCACCTTTTTCTTTGTTTAAGTCCCGCTCTATTAGTGGAGAATGGGAAATTTCTTCTTTCAGCTAAAAGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 TCAAAAGGGATAAATCAAAGCTAACATTTCACCTTTTTCTTTGTTTAAGTCCCGCTCTATTAGTGGAGAATGGGAAATTTCTTCTTTCAGCTAAAAGAAC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G25 TCGTAGAACTACTCGAACCGAGTACATTATCTCCATGGATGCTGATAACATCTCAAGATCCAGCAACTCTTACCTCGGAAAGCTCAGATCAAACTTCCTT :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 TCGTAGAACTACTCGAACCGAGTACATTATCTCCATGGATGCCGATAACATCTCAAGATCCAGCAACTCTTACCTCGGAAAGCTCAGATCAAACTTCCTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G25 GGGACAAAGTTCTTGGTGTACGACACGCAACCACCACCAAACACATCTTCGAGCGCACTTATCACTGATCGAACAAGCCGAAGCAGGTTTCACTCCAGAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: RE_127 GGGACAAAGTTCTTGGTGTACGACACGCAACCACCACCAAACACATCTTCGAGCGCACTTATCACTGATCGAACAAGCCGAGGCAGGTTTCACTCCAGAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G25 GAGTTTCTCCTAAAGTACCATCCGGAAGCTACAACATTGCTCAAATCACCTATGAGCTCAACGTGTTGGGCACACGCGGGCCACGACGAATGCACTGCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 GAGTTTCTCCTAAAGTACCATCCGGAAGCTACAACATTGCTCAAATCACCTATGAGCTCAACGTGTTGGGCACACGCGGGCCACGACGAATGCACTGCAT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G25 CATGAACTCCATCCCAATTTCATCGCTCGAACCAGGCGGTTCAGTCCCTAACCAACCCGAGAAACTCGTCCCTGCACCATACTCTCTCGACGACTCATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 CATGAACTCCATCCCAATTTCATCGCTCGAACCAGGCGGTTCAGTCCCTAACCAACCCGAGAAACTCGTCCCTGCACCATACTCTCTCGACGACTCATTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G25 CGCAGTAACATCTCCTTCTCCAAATCATCATTTGACCACCGCTCCCTCGATTTCAGCAGTTCTAGATTCTCCGAAATGGGAATATCCTGCGACGACAACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 CGCAGTAACATCTCCTTCTCCAAATCATCATTTGACCACCGCTCCCTCGATTTCAGCAGTTCTAGATTCTCCGAAATGGGAATATCCTGCGACGACAACG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G25 AAGAAGAAGCGAGTTTCAGACCGTTGATTCTAAAGAACAAGCAGCCAAGGTGGCACGAGCAGTTGCAATGCTGGTGTTTGAATTTCCGCGGACGTGTGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 AAGAAGAAGCGAGTTTCAGACCGTTGATTCTAAAGAACAAGCAGCCAAGGTGGCACGAGCAGTTGCAATGCTGGTGTTTGAATTTCCGCGGACGTGTGAC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G25 AGTTGCATCGGTTAAGAATTTCCAGCTTGTAGCAGCAAGACAGCCGCAGCCTCAAGGGACAGGTGCAGCAGCAGCACCAACAAGTGCACCTGCTCACCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 AGTTGCATCGGTTAAGAATTTCCAGCTTGTAGCAGCAAGACAGCCGCAGCCTCAAGGGACAGGTGCAGCAGCAGCACCAACAAGTGCACCTGCTCACCCT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT1G25 GAGCAAGACAAGGTGATTCTCCAGTTTGGTAAAGTAGGGAAAGATATGTTCACAATGGACTATAGGTATCCATTATCGGCGTTTCAGGCGTTTGCGATAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 GAGCAAGACAAGGTGATTCTCCAGTTTGGTAAAGTAGGGAAAGATATGTTCACAATGGACTATAGGTATCCATTATCGGCGTTTCAGGCGTTTGCGATAT 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 AT1G25 GCTTAAGCAGCTTTGACACCAAGCTTGCTTGTGAA ::::::::::::::::::::::::::::::::::: RE_127 GCTTAAGCAGCTTTGACACCAAGCTTGCTTGTGAA 1310 1320 1330 10 20 30 40 50 60 70 80 90 100 AT1G25 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G25 CQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 CQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFL 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G25 GTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 GTKFLVYDTQPPPNTSSSALITDRTSRGRFHSRRVSPKVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G25 RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_127 RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHP 310 320 330 340 350 360 370 380 390 400 410 420 430 440 AT1G25 EQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE ::::::::::::::::::::::::::::::::::::::::::::: RE_127 EQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 410 420 430 440

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