◆◆◆RE_1325 detail◆◆◆

Code name	RE_1325
Locus	AT1G06910
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_1325_1170bp ATGGCACTCTCGCAGTGGAAGGAAGCTATACTCGAAGGGATTTTCATGGAGATTGAGGATGGTATTGTGGAAGAGAAGAATCTCGAGCGATTAGAGAATC TTGTGGAGATTTTACACAAAGAAGGTTCTAAAGTACCCAAATCAGTCACGGAAGCGTATTGTAAAGTAGCTGTGGAGTGCACAGTGAAGTGTCTCGCTTA TGAGAAAGATGCAAAAAAGGCTTACACCGAAGCAATCAAAACGATATGGCTCGGTAGGATTATGCCTTTATGCGATAAGGTTAGTTGTTTGGTTACTCTT GACCTCTTGAAATGCTGTCGAAGATTATGGAAGGCCCACACTGACGACAAGGCTTGTAAGACACTGATGGATGAAGATACAAGAGACAAAGCTTTGGTTT GTTTGAGGAAGGTTGTTTTAGATTTGAATCCCAATCTTGTTTTAGAGAATCTCAACATGGATGAATCGGATGAGATTGAATCTAGTGAAGAATCTGAAGA GACAGAATCAATGGTTGAAGCAAGAGAGGGCGTGGGTAATCAGAACAGTCAGGCGTCTGAAGCTATGGAAGAAGACGACCAAGAGAGCCTCTTAGATACT GAACTGGAAAGACCTACCTCTGGAGGGTCAAAAGCTGTATATGTACCCAGTCAATTCAATCCCATTCCATCTGCAGTTGTTGACAGAGCGCTCAGAAAGC TGAGAGCTAGTAAAATCGAGCTAATGAAAGCTTTAGAAAAAGGAAGACCTTCAAATTTAAACAATGAGACGATTACAGAACAAGAAAACGATGTTGCTAA TCCTTCTGCAACAAACGCTGCACCAAGGCCTAGCTTGATGGAGCCACGTAGCACAGCACACACTTATGAATGGAATGACTCCATTGATGATTCAGATGGA GAAATGGGCGATGACATTGAAAGGATTAATAAATCAAAACGTAAAAGAATTGTCGTGTCTCCTTTGAAAAGAAACCGATGTTCAGAAGGTGCTAGAAGGC CAAAACTTCCTTGGAGTACTGCAGAAACGCTGGCCGTACTCAAAGGCTATGAAAAGTATGGTGCAAACTGGAAACGGATCAAAGATGAGAATCCAGCTCT AGTGCGCAGAACTAATGGTGATATTAAAGATAAATTTCGAGTTGAGATGAGACGTGAAGAGCGCCGTCAT >RE_1325_translated MALSQWKEAILEGIFMEIEDGIVEEKNLERLENLVEILHKEGSKVPKSVTEAYCKVAVECTVKCLAYEKDAKKAYTEAIKTIWLGRIMPLCDKVSCLVTL DLLKCCRRLWKAHTDDKACKTLMDEDTRDKALVCLRKVVLDLNPNLVLENLNMDESDEIESSEESEETESMVEAREGVGNQNSQASEAMEEDDQESLLDT ELERPTSGGSKAVYVPSQFNPIPSAVVDRALRKLRASKIELMKALEKGRPSNLNNETITEQENDVANPSATNAAPRPSLMEPRSTAHTYEWNDSIDDSDG EMGDDIERINKSKRKRIVVSPLKRNRCSEGARRPKLPWSTAETLAVLKGYEKYGANWKRIKDENPALVRRTNGDIKDKFRVEMRREERRH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1168/1170 (99.8%)（アミノ酸配列で389/390 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G06 ATGGCACTCTCGCAGTGGAAGGAAGCTATACTCGAAGGGATTTTCATGGAGATTGAGGATGGTATTGTGGAAGAGAAGAATCTCGAGCGATTAGAGAATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ATGGCACTCTCGCAGTGGAAGGAAGCTATACTCGAAGGGATTTTCATGGAGATTGAGGATGGTATTGTGGAAGAGAAGAATCTCGAGCGATTAGAGAATC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G06 TTGTGGAGATTTTACACAAAGAAGGTTCTAAAGTACCCAAATCAGTCACGGAAGCGTATTGTAAAGTAGCTGTGGAGTGCACAGTGAAGTGTCTCGCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 TTGTGGAGATTTTACACAAAGAAGGTTCTAAAGTACCCAAATCAGTCACGGAAGCGTATTGTAAAGTAGCTGTGGAGTGCACAGTGAAGTGTCTCGCTTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G06 TGAGAAAGATGCAAAAAAGGCTTACACCGAAGCAATCAAAACGATATGGCTCGGTAGGATTATGCCTTTATGCGATAAGGTTAGTTGTTTGGTTACTCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 TGAGAAAGATGCAAAAAAGGCTTACACCGAAGCAATCAAAACGATATGGCTCGGTAGGATTATGCCTTTATGCGATAAGGTTAGTTGTTTGGTTACTCTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G06 GACCTCTTGAAATGCTGTCGAAGATTATGGAAGGCCCACACTGACGACAAGGCTTGTAAGACACTGATGGATGAAGATACAAGAGACAAAGCTTTGGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GACCTCTTGAAATGCTGTCGAAGATTATGGAAGGCCCACACTGACGACAAGGCTTGTAAGACACTGATGGATGAAGATACAAGAGACAAAGCTTTGGTTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G06 GTTTGAGGAAGGTTGTTTTAGATTTGAATCCCAATCTTGTTTTAGAGAATCTCAACATGGATGAATCGGATGAGATTGAATCTAGTGAAGAATCTGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GTTTGAGGAAGGTTGTTTTAGATTTGAATCCCAATCTTGTTTTAGAGAATCTCAACATGGATGAATCGGATGAGATTGAATCTAGTGAAGAATCTGAAGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G06 GACAGAATCAATGGTTGAAGCAAGAGAGGGCGTGGGTAATCAGAACAGTCAGGCGTCTGAAGCTATGGAAGAAGACGACCAAGAGAGCCTCTTAGATACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GACAGAATCAATGGTTGAAGCAAGAGAGGGCGTGGGTAATCAGAACAGTCAGGCGTCTGAAGCTATGGAAGAAGACGACCAAGAGAGCCTCTTAGATACT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G06 GAACTGGAAAGACCTACTTCTGGAGGGTCAAAAGCTGTATATGTACCCAGTCAATTCAATCCCATTCCATCTGCAGTTGTTGACAGAGCGCTCAGAAAGC ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GAACTGGAAAGACCTACCTCTGGAGGGTCAAAAGCTGTATATGTACCCAGTCAATTCAATCCCATTCCATCTGCAGTTGTTGACAGAGCGCTCAGAAAGC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G06 TGAGAGCTAGTAAAATCGAGCTAATGAAAGCTTTAGAAAAAGGAAGACCTTCAAATTTAAACAATGAGACGATTACAGAACAAGAAAACGATGTTGCTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 TGAGAGCTAGTAAAATCGAGCTAATGAAAGCTTTAGAAAAAGGAAGACCTTCAAATTTAAACAATGAGACGATTACAGAACAAGAAAACGATGTTGCTAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G06 TCCTTCTGCAACAAACGCTGCACCAAGGCCTAGCTTGATGGAGCCACGTAGCACAGCACACACTTATGAATGGAATGACTCCATTGATGATTCAGATGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 TCCTTCTGCAACAAACGCTGCACCAAGGCCTAGCTTGATGGAGCCACGTAGCACAGCACACACTTATGAATGGAATGACTCCATTGATGATTCAGATGGA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G06 GAAATGGGCGATGACATTGAAAGGATTAATAAATCAAAACGTAAAAGAATTGTCGTGTCTCCTTTGAAAAGAAACCGATGTTCAGAAGGTGCTAGAAGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GAAATGGGCGATGACATTGAAAGGATTAATAAATCAAAACGTAAAAGAATTGTCGTGTCTCCTTTGAAAAGAAACCGATGTTCAGAAGGTGCTAGAAGGC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G06 CAAAACTTCCTTGGAGTACTGCAGAAACGCTGGCCGTACTCAAAGGCTATGAAAAGTATGGTGCAAACTGGAAACGGATCAAAGATGAGAATCCAGTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: RE_132 CAAAACTTCCTTGGAGTACTGCAGAAACGCTGGCCGTACTCAAAGGCTATGAAAAGTATGGTGCAAACTGGAAACGGATCAAAGATGAGAATCCAGCTCT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 AT1G06 AGTGCGCAGAACTAATGGTGATATTAAAGATAAATTTCGAGTTGAGATGAGACGTGAAGAGCGCCGTCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 AGTGCGCAGAACTAATGGTGATATTAAAGATAAATTTCGAGTTGAGATGAGACGTGAAGAGCGCCGTCAT 1110 1120 1130 1140 1150 1160 1170 10 20 30 40 50 60 70 80 90 100 AT1G06 MALSQWKEAILEGIFMEIEDGIVEEKNLERLENLVEILHKEGSKVPKSVTEAYCKVAVECTVKCLAYEKDAKKAYTEAIKTIWLGRIMPLCDKVSCLVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 MALSQWKEAILEGIFMEIEDGIVEEKNLERLENLVEILHKEGSKVPKSVTEAYCKVAVECTVKCLAYEKDAKKAYTEAIKTIWLGRIMPLCDKVSCLVTL 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G06 DLLKCCRRLWKAHTDDKACKTLMDEDTRDKALVCLRKVVLDLNPNLVLENLNMDESDEIESSEESEETESMVEAREGVGNQNSQASEAMEEDDQESLLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 DLLKCCRRLWKAHTDDKACKTLMDEDTRDKALVCLRKVVLDLNPNLVLENLNMDESDEIESSEESEETESMVEAREGVGNQNSQASEAMEEDDQESLLDT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G06 ELERPTSGGSKAVYVPSQFNPIPSAVVDRALRKLRASKIELMKALEKGRPSNLNNETITEQENDVANPSATNAAPRPSLMEPRSTAHTYEWNDSIDDSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ELERPTSGGSKAVYVPSQFNPIPSAVVDRALRKLRASKIELMKALEKGRPSNLNNETITEQENDVANPSATNAAPRPSLMEPRSTAHTYEWNDSIDDSDG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G06 EMGDDIERINKSKRKRIVVSPLKRNRCSEGARRPKLPWSTAETLAVLKGYEKYGANWKRIKDENPVLVRRTNGDIKDKFRVEMRREERRH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: RE_132 EMGDDIERINKSKRKRIVVSPLKRNRCSEGARRPKLPWSTAETLAVLKGYEKYGANWKRIKDENPALVRRTNGDIKDKFRVEMRREERRH 310 320 330 340 350 360 370 380 390

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