◆◆◆RE_1327 detail◆◆◆

Code name	RE_1327
Locus	AT1G09540
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.50%一致
comment	0520_20080115_1327_FRW1_555
sequence	>RE_1327_1098bp ATGGGGAGACATTCTTGCTGTTACAAACAAAAGCTGAGGAAAGGGCTTTGGTCTCCTGAAGAAGACGAGAAGCTTCTTACTCACATCACCAATCACGGCC ATGGCTGCTGGAGCTCTGTCCCTAAACTCGCTGGTTTGCAGAGATGTGGGAAGAGTTGTCGACTAAGATGGATCAATTACTTGAGACCTGATTTAAAGAG AGGAGCTTTTTCTCCTGAAGAAGAGAATCTCATCGTCGAACTTCATGCCGCCCTTGGAAACAGATGGTCACAGATTGCGTCAAGGCTTCCGGGTAGAACC GACAACGAGATCAAGAATCTATGGAACTCAAGCATCAAGAAGAAACTGAAACAAAGAGGCATTGACCCAAACACACACAAGCCCATCTCTGAAGTTGAGA GTTTTAGCGACAAAGACAAACCAACAACAAGCAACAACAAAAGAAGCGGTAACGATCACAAGTCTCCTAGTTCCTCTTCTGCGACTAACCAAGACTTCTT CCTCGAAAGGCCATCTGATTTATCCGACTACTTCGGATTTCAGAAGCTTAACTTCAACTCCAATCTAGGACTCTCTGTTACAACTGATTCTTCACTCTGC TCGATGATTCCGCCGCAGTTTAGCCCCGGGAACATGGTTGGTTCTGTCCTTCAGACACCAGTATGCGTAAAGCCCTCGATTAGTCTTCCTCCCGACAACA ACAGTTCGAGTCCTATCTCCGGAGGAGATCATGTGAAATTGGCTGCACCAAACTGGGAATTTCAGACAAACAACAATAATACCTCAAATTTCTTCGACAA TGGCGGATTCTCATGGTCTATCCCAAATTCTTCTACTTCTTCTTCACAAGTCAAACCAAATCATAGCTTCGAAGAAATAAAATGGTCAGAGTATTTGAAC ACACCGTTCTTCATAGGGAGTACTGTACAGAGTCAAACCTCTCAACCAATCTACATCAAATCAGAAACAGATTACTTAGCCAATGTTTCAAACATGACAG ATCCTTGGAGCCAAAACGAGAACTTGGGCACAACTGAAACTAGTGACGTGTTCTCCAAGGATCTTCAGAGAATGGCCGTCTCTTTTGGTCAGTCCCTT >RE_1327_translated MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSPEEENLIVELHAALGNRWSQIASRLPGRT DNEIKNLWNSSIKKKLKQRGIDPNTHKPISEVESFSDKDKPTTSNNKRSGNDHKSPSSSSATNQDFFLERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLC SMIPPQFSPGNMVGSVLQTPVCVKPSISLPPDNNSSSPISGGDHVKLAAPNWEFQTNNNNTSNFFDNGGFSWSIPNSSTSSSQVKPNHSFEEIKWSEYLN TPFFIGSTVQSQTSQPIYIKSETDYLANVSNMTDPWSQNENLGTTETSDVFSKDLQRMAVSFGQSL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1096/1098 (99.8%)（アミノ酸配列で364/366 (99.5%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G09 ATGGGGAGACATTCTTGCTGTTACAAACAAAAGCTGAGGAAAGGGCTTTGGTCTCCTGAAGAAGACGAGAAGCTTCTTACTCACATCACCAATCACGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ATGGGGAGACATTCTTGCTGTTACAAACAAAAGCTGAGGAAAGGGCTTTGGTCTCCTGAAGAAGACGAGAAGCTTCTTACTCACATCACCAATCACGGCC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G09 ATGGCTGCTGGAGCTCTGTCCCTAAACTCGCTGGTTTGCAGAGATGTGGGAAGAGTTGTCGACTAAGATGGATCAATTACTTGAGACCTGATTTAAAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ATGGCTGCTGGAGCTCTGTCCCTAAACTCGCTGGTTTGCAGAGATGTGGGAAGAGTTGTCGACTAAGATGGATCAATTACTTGAGACCTGATTTAAAGAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G09 AGGAGCTTTTTCTCCTGAAGAAGAGAATCTCATCGTCGAACTTCATGCCGTCCTTGGAAACAGATGGTCACAGATTGCGTCAAGGCTTCCGGGTAGAACC :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 AGGAGCTTTTTCTCCTGAAGAAGAGAATCTCATCGTCGAACTTCATGCCGCCCTTGGAAACAGATGGTCACAGATTGCGTCAAGGCTTCCGGGTAGAACC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G09 GACAACGAGATCAAGAATCTATGGAACTCAAGCATCAAGAAGAAACTGAAACAAAGAGGCATTGACCCAAACACACACAAGCCCATCTCTGAAGTTGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GACAACGAGATCAAGAATCTATGGAACTCAAGCATCAAGAAGAAACTGAAACAAAGAGGCATTGACCCAAACACACACAAGCCCATCTCTGAAGTTGAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G09 GTTTTAGCGACAAAGACAAACCAACAACAAGCAACAACAAAAGAAGCGGTAACGATCACAAGTCTCCTAGTTCCTCTTCTGCGACTAACCAAGACTTCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 GTTTTAGCGACAAAGACAAACCAACAACAAGCAACAACAAAAGAAGCGGTAACGATCACAAGTCTCCTAGTTCCTCTTCTGCGACTAACCAAGACTTCTT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G09 CCTCGAAAGGCCATCTGATTTATCCGACTACTTCGGATTTCAGAAGCTTAACTTCAACTCCAATCTAGGACTCTCTGTTACAACTGATTCTTCACTCTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 CCTCGAAAGGCCATCTGATTTATCCGACTACTTCGGATTTCAGAAGCTTAACTTCAACTCCAATCTAGGACTCTCTGTTACAACTGATTCTTCACTCTGC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G09 TCGATGATTCCGCCGCAGTTTAGCCCCGGGAACATGGTTGGTTCTGTCCTTCAGACACCAGTATGCGTAAAGCCCTCGATTAGTCTTCCTCCCGACAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 TCGATGATTCCGCCGCAGTTTAGCCCCGGGAACATGGTTGGTTCTGTCCTTCAGACACCAGTATGCGTAAAGCCCTCGATTAGTCTTCCTCCCGACAACA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G09 ACAGTTCGAGTCCTATCTCCGGAGGAGATCATGTGAAATTGGCTGCACCAAACTGGGAATTTCAGACAAACAACAATAATACCTCAAATTTCTTCGACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ACAGTTCGAGTCCTATCTCCGGAGGAGATCATGTGAAATTGGCTGCACCAAACTGGGAATTTCAGACAAACAACAATAATACCTCAAATTTCTTCGACAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G09 TGGCGGATTCTCATGGTCTATCCCAAATTCTTCTACTTCTTCTTCACAAGTCAAACCAAATCATAACTTCGAAGAAATAAAATGGTCAGAGTATTTGAAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: RE_132 TGGCGGATTCTCATGGTCTATCCCAAATTCTTCTACTTCTTCTTCACAAGTCAAACCAAATCATAGCTTCGAAGAAATAAAATGGTCAGAGTATTTGAAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G09 ACACCGTTCTTCATAGGGAGTACTGTACAGAGTCAAACCTCTCAACCAATCTACATCAAATCAGAAACAGATTACTTAGCCAATGTTTCAAACATGACAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ACACCGTTCTTCATAGGGAGTACTGTACAGAGTCAAACCTCTCAACCAATCTACATCAAATCAGAAACAGATTACTTAGCCAATGTTTCAAACATGACAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 AT1G09 ATCCTTGGAGCCAAAACGAGAACTTGGGCACAACTGAAACTAGTGACGTGTTCTCCAAGGATCTTCAGAGAATGGCCGTCTCTTTTGGTCAGTCCCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 ATCCTTGGAGCCAAAACGAGAACTTGGGCACAACTGAAACTAGTGACGTGTTCTCCAAGGATCTTCAGAGAATGGCCGTCTCTTTTGGTCAGTCCCTT 1010 1020 1030 1040 1050 1060 1070 1080 1090 10 20 30 40 50 60 70 80 90 100 AT1G09 MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: RE_132 MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSPEEENLIVELHAALGNRWSQIASRLPGRT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G09 DNEIKNLWNSSIKKKLKQRGIDPNTHKPISEVESFSDKDKPTTSNNKRSGNDHKSPSSSSATNQDFFLERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 DNEIKNLWNSSIKKKLKQRGIDPNTHKPISEVESFSDKDKPTTSNNKRSGNDHKSPSSSSATNQDFFLERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G09 SMIPPQFSPGNMVGSVLQTPVCVKPSISLPPDNNSSSPISGGDHVKLAAPNWEFQTNNNNTSNFFDNGGFSWSIPNSSTSSSQVKPNHNFEEIKWSEYLN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: RE_132 SMIPPQFSPGNMVGSVLQTPVCVKPSISLPPDNNSSSPISGGDHVKLAAPNWEFQTNNNNTSNFFDNGGFSWSIPNSSTSSSQVKPNHSFEEIKWSEYLN 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 AT1G09 TPFFIGSTVQSQTSQPIYIKSETDYLANVSNMTDPWSQNENLGTTETSDVFSKDLQRMAVSFGQSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_132 TPFFIGSTVQSQTSQPIYIKSETDYLANVSNMTDPWSQNENLGTTETSDVFSKDLQRMAVSFGQSL 310 320 330 340 350 360

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