◆◆◆RE_1331 detail◆◆◆

Code name	RE_1331
Locus	AT1G14350
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_1331_1308bp ATGGAAGATACGAAGAAGAAAAAGAAGAAGAATATTAACAACAACCAAGATTCCAAGAAAAAAGAGCGTCATATTGTTACTTGGTCACAAGAGGAAGATG TTATACTAAGAGAACAAATAACTCTACATGGAACTGAAAATTGGGCGATCATTGCATCAAAGTTCAAAGACAAAAGCACAAGACAATGCAGAAGAAGATG GTATACATACTTAAACTCTGATTTCAAAAGAGGAGGTTGGTCCCCTGAAGAAGATATGCTTTTGTGTGAGGCACAAAGAGTATTTGGTAATAGATGGACT GAGATAGCAAAGGTGGTTTCAGGCAGAACTGATAATGCTGTGAAGAACAGGCTTACAACACTTTGTAAGAAGAGAGCCAAGCATGAAGCTATGACTAAAG ACAGCAACTCAAACACCAAAAGAATGTTGTTCTTAGACGGTATCAGTACACCGCGAAAATCCGAGAATGAAACTCCTATTGCTAAGAAATTGAAGAGAAG TCACATTCTAGATCTCACAGAGATCAGTAACTATGGAAGGGCCGAGGCATGTGTGAATCAGCAGATAAGGTCTCCATTTTCGGTTTTAGCTCGAAATGCC ACTGGTATTGATAGCTTGGAAGAACAGAATCAAACAAGCAATGTGAATGAGAGTGATGGTGAAGGGATGTTTCTTAAGAAGGATGATCCAAAAGTGACAG CTTTGATGCAACAAGCTGAACTTTTAAGCTCCTTGGCGCAGAAAGTTAATGCAGACAACACAGAACAGAGTATGGAGAATGCTTGGAAGGTTCTTCAGGA CTTCTTGAATAAAGGCAAGGAGAATGATTTATTCAGATATGGAATACCTGATATAGATTTTAAGATCGAGGAATTTAAGGACCTTATAGAGGATTTGAGG AGTGGTTATGAAGACAATCAATTATCTTGGAGGCAACCTGATCTTCATGACTCACCAGCTAGCTCTGAGTATAGTTCCGGATCAACCATCATGGTGGATC AGTCTGGTGATAAAACACAACCATTCTCAGCAGATACTCAGACAGAACATAAGCAAGTTGGAGAGGAGTTGCTCGTCCCGAAAAATCCTGATGAGAATAT GCCCATCTCAGGCGAAGAAAAGTTCAGCTCGCCTATTCAGGTCACGCCATTGTTCAGATCTTTGGCAGACGGTATACCAAGTCCACAGTTCTCCGAAAGT GAGAGGAGCTTCCTGCTAAAAACACTAGGGATCGAGTCCTCATCTCCATGTCCAAGTGCTAATCCTTCAAAACCACCCCCTTGCAAAAGAGTCCTTCTCC ATAGCTTG >RE_1331_translated MEDTKKKKKKNINNNQDSKKKERHIVTWSQEEDVILREQITLHGTENWAIIASKFKDKSTRQCRRRWYTYLNSDFKRGGWSPEEDMLLCEAQRVFGNRWT EIAKVVSGRTDNAVKNRLTTLCKKRAKHEAMTKDSNSNTKRMLFLDGISTPRKSENETPIAKKLKRSHILDLTEISNYGRAEACVNQQIRSPFSVLARNA TGIDSLEEQNQTSNVNESDGEGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQDFLNKGKENDLFRYGIPDIDFKIEEFKDLIEDLR SGYEDNQLSWRQPDLHDSPASSEYSSGSTIMVDQSGDKTQPFSADTQTEHKQVGEELLVPKNPDENMPISGEEKFSSPIQVTPLFRSLADGIPSPQFSES ERSFLLKTLGIESSSPCPSANPSKPPPCKRVLLHSL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1307/1308 (99.9%)（アミノ酸配列で435/436 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G14 ATGGAAGATACGAAGAAGAAAAAGAAGAAGAATATTAACAACAACCAAGATTCCAAGAAAAAAGAGCGTCATATTGTTACTTGGTCACAAGAGGAAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 ATGGAAGATACGAAGAAGAAAAAGAAGAAGAATATTAACAACAACCAAGATTCCAAGAAAAAAGAGCGTCATATTGTTACTTGGTCACAAGAGGAAGATG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G14 TTATACTAAGAGAACAAATAACTCTACATGGAACTGAAAATTGGGCGATCATTGCATCAAAGTTCAAAGACAAAAGCACAAGACAATGCAGAAGAAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 TTATACTAAGAGAACAAATAACTCTACATGGAACTGAAAATTGGGCGATCATTGCATCAAAGTTCAAAGACAAAAGCACAAGACAATGCAGAAGAAGATG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G14 GTATACATACTTAAACTCTGATTTCAAAAGAGGAGGTTGGTCCCCTGAAGAAGATATGCTTTTGTGTGAGGCACAAAGAGTATTTGGTAATAGATGGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 GTATACATACTTAAACTCTGATTTCAAAAGAGGAGGTTGGTCCCCTGAAGAAGATATGCTTTTGTGTGAGGCACAAAGAGTATTTGGTAATAGATGGACT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G14 GAGATAGCAAAGGTGGTTTCAGGCAGAACTGATAATGCTGTGAAGAACAGGTTTACAACACTTTGTAAGAAGAGAGCCAAGCATGAAGCTATGACTAAAG ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: RE_133 GAGATAGCAAAGGTGGTTTCAGGCAGAACTGATAATGCTGTGAAGAACAGGCTTACAACACTTTGTAAGAAGAGAGCCAAGCATGAAGCTATGACTAAAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G14 ACAGCAACTCAAACACCAAAAGAATGTTGTTCTTAGACGGTATCAGTACACCGCGAAAATCCGAGAATGAAACTCCTATTGCTAAGAAATTGAAGAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 ACAGCAACTCAAACACCAAAAGAATGTTGTTCTTAGACGGTATCAGTACACCGCGAAAATCCGAGAATGAAACTCCTATTGCTAAGAAATTGAAGAGAAG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G14 TCACATTCTAGATCTCACAGAGATCAGTAACTATGGAAGGGCCGAGGCATGTGTGAATCAGCAGATAAGGTCTCCATTTTCGGTTTTAGCTCGAAATGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 TCACATTCTAGATCTCACAGAGATCAGTAACTATGGAAGGGCCGAGGCATGTGTGAATCAGCAGATAAGGTCTCCATTTTCGGTTTTAGCTCGAAATGCC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G14 ACTGGTATTGATAGCTTGGAAGAACAGAATCAAACAAGCAATGTGAATGAGAGTGATGGTGAAGGGATGTTTCTTAAGAAGGATGATCCAAAAGTGACAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 ACTGGTATTGATAGCTTGGAAGAACAGAATCAAACAAGCAATGTGAATGAGAGTGATGGTGAAGGGATGTTTCTTAAGAAGGATGATCCAAAAGTGACAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G14 CTTTGATGCAACAAGCTGAACTTTTAAGCTCCTTGGCGCAGAAAGTTAATGCAGACAACACAGAACAGAGTATGGAGAATGCTTGGAAGGTTCTTCAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 CTTTGATGCAACAAGCTGAACTTTTAAGCTCCTTGGCGCAGAAAGTTAATGCAGACAACACAGAACAGAGTATGGAGAATGCTTGGAAGGTTCTTCAGGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G14 CTTCTTGAATAAAGGCAAGGAGAATGATTTATTCAGATATGGAATACCTGATATAGATTTTAAGATCGAGGAATTTAAGGACCTTATAGAGGATTTGAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 CTTCTTGAATAAAGGCAAGGAGAATGATTTATTCAGATATGGAATACCTGATATAGATTTTAAGATCGAGGAATTTAAGGACCTTATAGAGGATTTGAGG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G14 AGTGGTTATGAAGACAATCAATTATCTTGGAGGCAACCTGATCTTCATGACTCACCAGCTAGCTCTGAGTATAGTTCCGGATCAACCATCATGGTGGATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 AGTGGTTATGAAGACAATCAATTATCTTGGAGGCAACCTGATCTTCATGACTCACCAGCTAGCTCTGAGTATAGTTCCGGATCAACCATCATGGTGGATC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G14 AGTCTGGTGATAAAACACAACCATTCTCAGCAGATACTCAGACAGAACATAAGCAAGTTGGAGAGGAGTTGCTCGTCCCGAAAAATCCTGATGAGAATAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 AGTCTGGTGATAAAACACAACCATTCTCAGCAGATACTCAGACAGAACATAAGCAAGTTGGAGAGGAGTTGCTCGTCCCGAAAAATCCTGATGAGAATAT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G14 GCCCATCTCAGGCGAAGAAAAGTTCAGCTCGCCTATTCAGGTCACGCCATTGTTCAGATCTTTGGCAGACGGTATACCAAGTCCACAGTTCTCCGAAAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 GCCCATCTCAGGCGAAGAAAAGTTCAGCTCGCCTATTCAGGTCACGCCATTGTTCAGATCTTTGGCAGACGGTATACCAAGTCCACAGTTCTCCGAAAGT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT1G14 GAGAGGAGCTTCCTGCTAAAAACACTAGGGATCGAGTCCTCATCTCCATGTCCAAGTGCTAATCCTTCAAAACCACCCCCTTGCAAAAGAGTCCTTCTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 GAGAGGAGCTTCCTGCTAAAAACACTAGGGATCGAGTCCTCATCTCCATGTCCAAGTGCTAATCCTTCAAAACCACCCCCTTGCAAAAGAGTCCTTCTCC 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT1G14 ATAGCTTG :::::::: RE_133 ATAGCTTG 10 20 30 40 50 60 70 80 90 100 AT1G14 MEDTKKKKKKNINNNQDSKKKERHIVTWSQEEDVILREQITLHGTENWAIIASKFKDKSTRQCRRRWYTYLNSDFKRGGWSPEEDMLLCEAQRVFGNRWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 MEDTKKKKKKNINNNQDSKKKERHIVTWSQEEDVILREQITLHGTENWAIIASKFKDKSTRQCRRRWYTYLNSDFKRGGWSPEEDMLLCEAQRVFGNRWT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G14 EIAKVVSGRTDNAVKNRFTTLCKKRAKHEAMTKDSNSNTKRMLFLDGISTPRKSENETPIAKKLKRSHILDLTEISNYGRAEACVNQQIRSPFSVLARNA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 EIAKVVSGRTDNAVKNRLTTLCKKRAKHEAMTKDSNSNTKRMLFLDGISTPRKSENETPIAKKLKRSHILDLTEISNYGRAEACVNQQIRSPFSVLARNA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G14 TGIDSLEEQNQTSNVNESDGEGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQDFLNKGKENDLFRYGIPDIDFKIEEFKDLIEDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 TGIDSLEEQNQTSNVNESDGEGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQDFLNKGKENDLFRYGIPDIDFKIEEFKDLIEDLR 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G14 SGYEDNQLSWRQPDLHDSPASSEYSSGSTIMVDQSGDKTQPFSADTQTEHKQVGEELLVPKNPDENMPISGEEKFSSPIQVTPLFRSLADGIPSPQFSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 SGYEDNQLSWRQPDLHDSPASSEYSSGSTIMVDQSGDKTQPFSADTQTEHKQVGEELLVPKNPDENMPISGEEKFSSPIQVTPLFRSLADGIPSPQFSES 310 320 330 340 350 360 370 380 390 400 410 420 430 AT1G14 ERSFLLKTLGIESSSPCPSANPSKPPPCKRVLLHSL :::::::::::::::::::::::::::::::::::: RE_133 ERSFLLKTLGIESSSPCPSANPSKPPPCKRVLLHSL 410 420 430

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