◆◆◆RE_1332 detail◆◆◆

Code name	RE_1332
Locus	AT1G15720
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0424_アミノ酸配列70%以上一致
sequence	>RE_1332_1170bp ATGGAAGTGATGGACAAATGGGTAGCTGAATTTTTCCTCCGACGCCAACTAAATCCTAGGGTTTACGCTTTTCCACTGTTATCGGCTCTGAAACCAGTAG ATTCCGACGACTGTGTAAAACTCAAGCTAACTGCTGTTTTGCGGGATATCTCCAATTCCATGATTCAAGGTACCGTACACGAAGGAATGCTTGATCTCCT CGAAATTCTTGAGAAGCTTCTGTTACAGGAACATTCGGTTATCATGGGATCTCTCAAATCTGCGTATTGCTGGACTGCTGTGGAATGCACGCTTAGGTTT ATGTGGCCAGTGAATGCTTCGGATGGCTTCTTCGGTGATGCCCTTGAGAGGATTTGGAGGAATCGGATTGGGACATTGAAGGAGAAAGAGAGCGACTTGG TGACTCGTGAGTTGTTGAAATGGGAGAGTGATCTAAACAAGGCGTTTGAGGAACCTGAGATTTACCAGAAGATTCGTGAGACTAACATCAGGTACAATGC CATCTCTCATCTTAATCAGCTTCTCAAAGAGCAGTGGGCACTACTTGGATGTTCTTCTCTTGAATCAGAAGCTCGAAAGAGGTTTCTTAAGCGTAAGGAT TCACCATATGCTTCCCGGAGAGGAGGTAATAGAGAGAAAGCTAATGATGTTGAAGAAGTGGGTGGTGTGGAGAATCCTGATGGGGTTGGTAAGGTGAATG AACATGAACAGGAACACGAGCCAAGTCTTAATAAGGGGGAAATGTTGGTAGCTCGAGAGCTTAAGGATTTTTTGTTGGAGATTCAAAGACTCATCGACCC TATAACAAGGCAAGATCAAGAACCTAACAATGCAATGGAGCATTCAGTTGATGTCACTCCTCAGCCTGATGGGGCAAATAGGACTGATGCAGAAGATAGT GAGGGAACATCATCGTCTAGAAGAGTCAGGCCTCATCTACCAACCCCGGAACCTCTGAATGTATCACCGTTGAAGAAAGGAAGATTAGAAAGACCGCGTC CCAGAAGGCCAATGAAATTCTGGACTTCTGAAGAAGTGGCAGCTTTGAGGGAAGGAGTTAAAGAATATGGAAAATCATGGAAAGATATCAAGAATTCATA CCCTGTTGTTTTCGCTGATAGGAGCGAGGTGGATTTGAAGGATAAGTGGAGGAATTTACTTGGTCGTCAG >RE_1332_translated MEVMDKWVAEFFLRRQLNPRVYAFPLLSALKPVDSDDCVKLKLTAVLRDISNSMIQGTVHEGMLDLLEILEKLLLQEHSVIMGSLKSAYCWTAVECTLRF MWPVNASDGFFGDALERIWRNRIGTLKEKESDLVTRELLKWESDLNKAFEEPEIYQKIRETNIRYNAISHLNQLLKEQWALLGCSSLESEARKRFLKRKD SPYASRRGGNREKANDVEEVGGVENPDGVGKVNEHEQEHEPSLNKGEMLVARELKDFLLEIQRLIDPITRQDQEPNNAMEHSVDVTPQPDGANRTDAEDS EGTSSSRRVRPHLPTPEPLNVSPLKKGRLERPRPRRPMKFWTSEEVAALREGVKEYGKSWKDIKNSYPVVFADRSEVDLKDKWRNLLGRQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1169/1170 (99.9%)（アミノ酸配列で389/390 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G15 ATGGAAGTGATGGACAAATGGGTAGCTGAATTTTTCCTCCGACGCCAACTAAATCCTAGGGTTTACGCTTTTCCACTGTTATCGGCTCTGAAACCAGTAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 ATGGAAGTGATGGACAAATGGGTAGCTGAATTTTTCCTCCGACGCCAACTAAATCCTAGGGTTTACGCTTTTCCACTGTTATCGGCTCTGAAACCAGTAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G15 ATTCCGACGACTGTGTAAAACTCAAGCTAACTGCTGTTTTGCGGGATATCTCCAATTCCATGATTCAAGGTACCGTAGACGAAGGAATGCTTGATCTCCT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: RE_133 ATTCCGACGACTGTGTAAAACTCAAGCTAACTGCTGTTTTGCGGGATATCTCCAATTCCATGATTCAAGGTACCGTACACGAAGGAATGCTTGATCTCCT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G15 CGAAATTCTTGAGAAGCTTCTGTTACAGGAACATTCGGTTATCATGGGATCTCTCAAATCTGCGTATTGCTGGACTGCTGTGGAATGCACGCTTAGGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 CGAAATTCTTGAGAAGCTTCTGTTACAGGAACATTCGGTTATCATGGGATCTCTCAAATCTGCGTATTGCTGGACTGCTGTGGAATGCACGCTTAGGTTT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G15 ATGTGGCCAGTGAATGCTTCGGATGGCTTCTTCGGTGATGCCCTTGAGAGGATTTGGAGGAATCGGATTGGGACATTGAAGGAGAAAGAGAGCGACTTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 ATGTGGCCAGTGAATGCTTCGGATGGCTTCTTCGGTGATGCCCTTGAGAGGATTTGGAGGAATCGGATTGGGACATTGAAGGAGAAAGAGAGCGACTTGG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G15 TGACTCGTGAGTTGTTGAAATGGGAGAGTGATCTAAACAAGGCGTTTGAGGAACCTGAGATTTACCAGAAGATTCGTGAGACTAACATCAGGTACAATGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 TGACTCGTGAGTTGTTGAAATGGGAGAGTGATCTAAACAAGGCGTTTGAGGAACCTGAGATTTACCAGAAGATTCGTGAGACTAACATCAGGTACAATGC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G15 CATCTCTCATCTTAATCAGCTTCTCAAAGAGCAGTGGGCACTACTTGGATGTTCTTCTCTTGAATCAGAAGCTCGAAAGAGGTTTCTTAAGCGTAAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 CATCTCTCATCTTAATCAGCTTCTCAAAGAGCAGTGGGCACTACTTGGATGTTCTTCTCTTGAATCAGAAGCTCGAAAGAGGTTTCTTAAGCGTAAGGAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G15 TCACCATATGCTTCCCGGAGAGGAGGTAATAGAGAGAAAGCTAATGATGTTGAAGAAGTGGGTGGTGTGGAGAATCCTGATGGGGTTGGTAAGGTGAATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 TCACCATATGCTTCCCGGAGAGGAGGTAATAGAGAGAAAGCTAATGATGTTGAAGAAGTGGGTGGTGTGGAGAATCCTGATGGGGTTGGTAAGGTGAATG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G15 AACATGAACAGGAACACGAGCCAAGTCTTAATAAGGGGGAAATGTTGGTAGCTCGAGAGCTTAAGGATTTTTTGTTGGAGATTCAAAGACTCATCGACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 AACATGAACAGGAACACGAGCCAAGTCTTAATAAGGGGGAAATGTTGGTAGCTCGAGAGCTTAAGGATTTTTTGTTGGAGATTCAAAGACTCATCGACCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G15 TATAACAAGGCAAGATCAAGAACCTAACAATGCAATGGAGCATTCAGTTGATGTCACTCCTCAGCCTGATGGGGCAAATAGGACTGATGCAGAAGATAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 TATAACAAGGCAAGATCAAGAACCTAACAATGCAATGGAGCATTCAGTTGATGTCACTCCTCAGCCTGATGGGGCAAATAGGACTGATGCAGAAGATAGT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G15 GAGGGAACATCATCGTCTAGAAGAGTCAGGCCTCATCTACCAACCCCGGAACCTCTGAATGTATCACCGTTGAAGAAAGGAAGATTAGAAAGACCGCGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 GAGGGAACATCATCGTCTAGAAGAGTCAGGCCTCATCTACCAACCCCGGAACCTCTGAATGTATCACCGTTGAAGAAAGGAAGATTAGAAAGACCGCGTC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G15 CCAGAAGGCCAATGAAATTCTGGACTTCTGAAGAAGTGGCAGCTTTGAGGGAAGGAGTTAAAGAATATGGAAAATCATGGAAAGATATCAAGAATTCATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 CCAGAAGGCCAATGAAATTCTGGACTTCTGAAGAAGTGGCAGCTTTGAGGGAAGGAGTTAAAGAATATGGAAAATCATGGAAAGATATCAAGAATTCATA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 AT1G15 CCCTGTTGTTTTCGCTGATAGGAGCGAGGTGGATTTGAAGGATAAGTGGAGGAATTTACTTGGTCGTCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 CCCTGTTGTTTTCGCTGATAGGAGCGAGGTGGATTTGAAGGATAAGTGGAGGAATTTACTTGGTCGTCAG 1110 1120 1130 1140 1150 1160 1170 10 20 30 40 50 60 70 80 90 100 AT1G15 MEVMDKWVAEFFLRRQLNPRVYAFPLLSALKPVDSDDCVKLKLTAVLRDISNSMIQGTVDEGMLDLLEILEKLLLQEHSVIMGSLKSAYCWTAVECTLRF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: RE_133 MEVMDKWVAEFFLRRQLNPRVYAFPLLSALKPVDSDDCVKLKLTAVLRDISNSMIQGTVHEGMLDLLEILEKLLLQEHSVIMGSLKSAYCWTAVECTLRF 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G15 MWPVNASDGFFGDALERIWRNRIGTLKEKESDLVTRELLKWESDLNKAFEEPEIYQKIRETNIRYNAISHLNQLLKEQWALLGCSSLESEARKRFLKRKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 MWPVNASDGFFGDALERIWRNRIGTLKEKESDLVTRELLKWESDLNKAFEEPEIYQKIRETNIRYNAISHLNQLLKEQWALLGCSSLESEARKRFLKRKD 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G15 SPYASRRGGNREKANDVEEVGGVENPDGVGKVNEHEQEHEPSLNKGEMLVARELKDFLLEIQRLIDPITRQDQEPNNAMEHSVDVTPQPDGANRTDAEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 SPYASRRGGNREKANDVEEVGGVENPDGVGKVNEHEQEHEPSLNKGEMLVARELKDFLLEIQRLIDPITRQDQEPNNAMEHSVDVTPQPDGANRTDAEDS 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G15 EGTSSSRRVRPHLPTPEPLNVSPLKKGRLERPRPRRPMKFWTSEEVAALREGVKEYGKSWKDIKNSYPVVFADRSEVDLKDKWRNLLGRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_133 EGTSSSRRVRPHLPTPEPLNVSPLKKGRLERPRPRRPMKFWTSEEVAALREGVKEYGKSWKDIKNSYPVVFADRSEVDLKDKWRNLLGRQ 310 320 330 340 350 360 370 380 390

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