◆◆◆RE_1365 detail◆◆◆

Code name	RE_1365
Locus	AT2G03470
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0318_アミノ酸配列70%以上一致
sequence	>RE_1365_1347bp ATGGGATTAAAGCGACCTTATGATGCTGAAGAGATGCAAAAGTGCAATGCTAAGCATGCAAGACAGCTTAGTTACAAAAACCATAACCAATTTGACGAAG CTATTCCATATCATCATGCTTCTATGGAGAAGAAGACAAATGTTTTAGAGGATCTGATTGGTCTCTGTGAGAATCCTACGTGGACTAATGATGCAAATCA CGTTGACAAGGGTTTTGAAACAACCGGTTTGTGTCAGGAAGATTCTCAGTCTGGAGTGACGACTCAGTCAGATCTTTCTCATCAATCTTCTGGTTCAGAT TTCACCTGGAAGCCAGTGGAAGATGTTTATACTTGTTTGATGAATCAACCTCCTAGGAAACAAGTTCTTGTTGGGTCTAATCATCAAGCGGATATTCCCG AGTTTGTCAAGGAAGAGATTCTTGATCAGTCAGAGGCTCGAACTAAGGAGGACTTAGAAGGGAAGCTGATGAGAAAGTGTGTGATACCAATGTCTGACTC TGACCTTTGTGGAACCGGTCAAGGAAGAAAGGAATGTCTTTGCCTAGATAAAGGCTCTATTAGATGTGTGCGGCGACATATCATTGAAGCCAGAGAGAGT TTGGTTGAAACTATTGGATATGAAAGGTTTATGGAGCTAGGGTTATGTGAGATGGGGGAGGAAGTTGCGAGTTTATGGACAGAGGAAGAAGAAGATCTCT TTCACAAGGTTGTATACTCCAATCCTTTCTCAGCGGGTCGTGACTTCTGGAAGCAATTAAAGGGAACGTTTCCTTCAAGAACCATGAAGGAGTTGGTTAG CTACTACTTCAATGTCTTCATCTTGCGGAGACGGGGTATTCAGAATCGGTTCAAAGCCCTAGATGTTGACAGTGATGATGACGAGTGGCAAGTTGAATAC AACATTTTTAACAGCACCAAATCTTTAGATGAGGAAGACAACAATGGAAATCGCTCCTCATATGAAGATAACGAGGAAGAAGAAGAAACCAGCAGCAATG ATGATGATGAAGAAGAAGAAGAGGAAGACGACTCATCAAGTAACGATGCTCATTGTGTAGATACGGATAAGGCTTCAAGAGACGGTTTTGGTGAAGAAGT AAATGTGGAAGACGACTCATGTATGTCCTTCGAGTTACAAGACTCCAACTTGATCTTCAGTCACAACCCAATCAAAAACAGAGAGTGCCACAGATCTGGT GAAGATTCATATTCATTTGATGATCAGAGATTCACATCAGATTGTTGGAACAAGAACAACGATCTACTACCAACTTCAAACATTATTGAGGAGATATTTG GTCAAGACGATTGGGGAGATAAAGATGATAATAACTTGAAGGAGAAG >RE_1365_translated MGLKRPYDAEEMQKCNAKHARQLSYKNHNQFDEAIPYHHASMEKKTNVLEDLIGLCENPTWTNDANHVDKGFETTGLCQEDSQSGVTTQSDLSHQSSGSD FTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARES LVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDDEWQVEY NIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSNDDDEEEEEEDDSSSNDAHCVDTDKASRDGFGEEVNVEDDSCMSFELQDSNLIFSHNPIKNRECHRSG EDSYSFDDQRFTSDCWNKNNDLLPTSNIIEEIFGQDDWGDKDDNNLKEK
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1347/1350 (99.8%)（アミノ酸配列で449/450 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G03 ATGGGATTAAAGCGACCTTATGATGCTGAAGAGATGCAAAAGTGCAATGCTAAGCATGCAAGACAGCTTAGTTACAAAAACCATAACCAATTTGACGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 ATGGGATTAAAGCGACCTTATGATGCTGAAGAGATGCAAAAGTGCAATGCTAAGCATGCAAGACAGCTTAGTTACAAAAACCATAACCAATTTGACGAAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G03 CTATTCCATATCATCATGCTTCTATGGAGAAGAAGACAAATGTTTTAGTAGAGGATCTGATTGGTCTCTGTGAGAATCCTACGTGGACTAATGATGCAAA ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 CTATTCCATATCATCATGCTTCTATGGAGAAGAAGACAAATGTTT---TAGAGGATCTGATTGGTCTCTGTGAGAATCCTACGTGGACTAATGATGCAAA 110 120 130 140 150 160 170 180 190 210 220 230 240 250 260 270 280 290 300 AT2G03 TCACGTTGACAAGGGTTTTGAAACAACCGGTTTGTGTCAGGAAGATTCTCAGTCTGGAGTGACGACTCAGTCAGATCTTTCTCATCAATCTTCTGGTTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 TCACGTTGACAAGGGTTTTGAAACAACCGGTTTGTGTCAGGAAGATTCTCAGTCTGGAGTGACGACTCAGTCAGATCTTTCTCATCAATCTTCTGGTTCA 200 210 220 230 240 250 260 270 280 290 310 320 330 340 350 360 370 380 390 400 AT2G03 GATTTCACCTGGAAGCCAGTGGAAGATGTTTATACTTGTTTGATGAATCAACCTCCTAGGAAACAAGTTCTTGTTGGGTCTAATCATCAAGCGGATATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 GATTTCACCTGGAAGCCAGTGGAAGATGTTTATACTTGTTTGATGAATCAACCTCCTAGGAAACAAGTTCTTGTTGGGTCTAATCATCAAGCGGATATTC 300 310 320 330 340 350 360 370 380 390 410 420 430 440 450 460 470 480 490 500 AT2G03 CCGAGTTTGTCAAGGAAGAGATTCTTGATCAGTCAGAGGCTCGAACTAAGGAGGACTTAGAAGGGAAGCTGATGAGAAAGTGTGTGATACCAATGTCTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 CCGAGTTTGTCAAGGAAGAGATTCTTGATCAGTCAGAGGCTCGAACTAAGGAGGACTTAGAAGGGAAGCTGATGAGAAAGTGTGTGATACCAATGTCTGA 400 410 420 430 440 450 460 470 480 490 510 520 530 540 550 560 570 580 590 600 AT2G03 CTCTGACCTTTGTGGAACCGGTCAAGGAAGAAAGGAATGTCTTTGCCTAGATAAAGGCTCTATTAGATGTGTGCGGCGACATATCATTGAAGCCAGAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 CTCTGACCTTTGTGGAACCGGTCAAGGAAGAAAGGAATGTCTTTGCCTAGATAAAGGCTCTATTAGATGTGTGCGGCGACATATCATTGAAGCCAGAGAG 500 510 520 530 540 550 560 570 580 590 610 620 630 640 650 660 670 680 690 700 AT2G03 AGTTTGGTTGAAACTATTGGATATGAAAGGTTTATGGAGCTAGGGTTATGTGAGATGGGGGAGGAAGTTGCGAGTTTATGGACAGAGGAAGAAGAAGATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 AGTTTGGTTGAAACTATTGGATATGAAAGGTTTATGGAGCTAGGGTTATGTGAGATGGGGGAGGAAGTTGCGAGTTTATGGACAGAGGAAGAAGAAGATC 600 610 620 630 640 650 660 670 680 690 710 720 730 740 750 760 770 780 790 800 AT2G03 TCTTTCACAAGGTTGTATACTCCAATCCTTTCTCAGCGGGTCGTGACTTCTGGAAGCAATTAAAGGGAACGTTTCCTTCAAGAACCATGAAGGAGTTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 TCTTTCACAAGGTTGTATACTCCAATCCTTTCTCAGCGGGTCGTGACTTCTGGAAGCAATTAAAGGGAACGTTTCCTTCAAGAACCATGAAGGAGTTGGT 700 710 720 730 740 750 760 770 780 790 810 820 830 840 850 860 870 880 890 900 AT2G03 TAGCTACTACTTCAATGTCTTCATCTTGCGGAGACGGGGTATTCAGAATCGGTTCAAAGCCCTAGATGTTGACAGTGATGATGACGAGTGGCAAGTTGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 TAGCTACTACTTCAATGTCTTCATCTTGCGGAGACGGGGTATTCAGAATCGGTTCAAAGCCCTAGATGTTGACAGTGATGATGACGAGTGGCAAGTTGAA 800 810 820 830 840 850 860 870 880 890 910 920 930 940 950 960 970 980 990 1000 AT2G03 TACAACATTTTTAACAGCACCAAATCTTTAGATGAGGAAGACAACAATGGAAATCGCTCCTCATATGAAGATAACGAGGAAGAAGAAGAAACCAGCAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 TACAACATTTTTAACAGCACCAAATCTTTAGATGAGGAAGACAACAATGGAAATCGCTCCTCATATGAAGATAACGAGGAAGAAGAAGAAACCAGCAGCA 900 910 920 930 940 950 960 970 980 990 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G03 ATGATGATGATGAAGAAGAAGAAGAGGAAGACGACTCATCAAGTAACGATGCTCATTGTGTAGATACGGATAAGGCTTCAAGAGACGGTTTTGGTGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 ATGATGATGATGAAGAAGAAGAAGAGGAAGACGACTCATCAAGTAACGATGCTCATTGTGTAGATACGGATAAGGCTTCAAGAGACGGTTTTGGTGAAGA 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT2G03 AGTAAATGTGGAAGACGACTCATGTATGTCCTTCGAGTTACAAGACTCCAACTTGATCTTCAGTCACAACCCAATCAAAAACAGAGAGTGCCACAGATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 AGTAAATGTGGAAGACGACTCATGTATGTCCTTCGAGTTACAAGACTCCAACTTGATCTTCAGTCACAACCCAATCAAAAACAGAGAGTGCCACAGATCT 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT2G03 GGTGAAGATTCATATTCATTTGATGATCAGAGATTCACATCAGATTGTTGGAACAAGAACAACGATCTACTACCAACTTCAAACATTATTGAGGAGATAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 GGTGAAGATTCATATTCATTTGATGATCAGAGATTCACATCAGATTGTTGGAACAAGAACAACGATCTACTACCAACTTCAAACATTATTGAGGAGATAT 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1310 1320 1330 1340 1350 AT2G03 TTGGTCAAGACGATTGGGGAGATAAAGATGATAATAACTTGAAGGAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 TTGGTCAAGACGATTGGGGAGATAAAGATGATAATAACTTGAAGGAGAAG 1300 1310 1320 1330 1340 10 20 30 40 50 60 70 80 90 100 AT2G03 MGLKRPYDAEEMQKCNAKHARQLSYKNHNQFDEAIPYHHASMEKKTNVLVEDLIGLCENPTWTNDANHVDKGFETTGLCQEDSQSGVTTQSDLSHQSSGS ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 MGLKRPYDAEEMQKCNAKHARQLSYKNHNQFDEAIPYHHASMEKKTNVL-EDLIGLCENPTWTNDANHVDKGFETTGLCQEDSQSGVTTQSDLSHQSSGS 10 20 30 40 50 60 70 80 90 110 120 130 140 150 160 170 180 190 200 AT2G03 DFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 DFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARE 100 110 120 130 140 150 160 170 180 190 210 220 230 240 250 260 270 280 290 300 AT2G03 SLVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDDEWQVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 SLVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDDEWQVE 200 210 220 230 240 250 260 270 280 290 310 320 330 340 350 360 370 380 390 400 AT2G03 YNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSNDDDEEEEEEDDSSSNDAHCVDTDKASRDGFGEEVNVEDDSCMSFELQDSNLIFSHNPIKNRECHRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 YNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSNDDDEEEEEEDDSSSNDAHCVDTDKASRDGFGEEVNVEDDSCMSFELQDSNLIFSHNPIKNRECHRS 300 310 320 330 340 350 360 370 380 390 410 420 430 440 450 AT2G03 GEDSYSFDDQRFTSDCWNKNNDLLPTSNIIEEIFGQDDWGDKDDNNLKEK :::::::::::::::::::::::::::::::::::::::::::::::::: RE_136 GEDSYSFDDQRFTSDCWNKNNDLLPTSNIIEEIFGQDDWGDKDDNNLKEK 400 410 420 430 440

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