◆◆◆RE_1435 detail◆◆◆

Code name	RE_1435
Locus	AT5G02840
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.30%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_1435_879bp ATGACCTCAACCAATCCGGTGGTCGCCGAAGTAATACCGGCGGAAACTTCTACAGATGCTACAGAGACGACGATTGCAACGACGGAAGCTGGTGAAGCAC CGGAGAAGAAGGTGAGGAAAGCTTACACAATCACCAAGTCTAGAGAGAGTTGGACTGAAGGAGAACACGACAAGTTTCTGGAAGCTCTTCAATTGTTTGA TCGTGACTGGAAAAAGATAGAAGATTTTGTTGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAATACTTTCTAAAGGTCCAAAAAAATCGG ACTTTAGCACATGTTCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCGAAAAATGCTCAAATGTCGCTTCACGTTTCCA TGTCCTTTCCTACTCAAATAAATAACCTGCCTGGATATACTCCATGGGATGATGATACATCTGCATTGTTAAACATTGCTGTAAGTGGGGTTATTCCACC AGAAGATGAACTTGATACTCTTTGTGGAGCAGAAGTTGATGTTGGATCAAATGACATGATAAGTGAAACTAGTCCTTCAGCATCTGGTATCGGAAGCTCA AGCAGAACACTATCAGATTCTAAGGGTTTGAGACTGGCGAAACAAGCTCCCTCAATGCATGGTCTTCCTGATTTTGCTGAGGTTTATAACTTCATTGGGA GTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTTTTGCTGTTGATGAGAAACCTCACAGT GAACTTGTCAGACCCTGACTTTGAACCTACTTCTGAATATGTTGATGCTGCAGAGGAAGGTCATGAACACTTAAGCTCT >RE_1435_translated MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNR TLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLPGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDVGSNDMISETSPSASGIGSS SRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSDPDFEPTSEYVDAAEEGHEHLSS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 877/879 (99.8%)（アミノ酸配列で291/293 (99.3%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G02 ATGACCTCAACCAATCCGGTGGTCGCCGAAGTAATACCGGCGGAAACTTCTACAGATGCTACAGAGACGACGATTGCAACGACGGAAGCTGGTGAAGCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 ATGACCTCAACCAATCCGGTGGTCGCCGAAGTAATACCGGCGGAAACTTCTACAGATGCTACAGAGACGACGATTGCAACGACGGAAGCTGGTGAAGCAC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G02 CGGAGAAGAAGGTGAGGAAAGCTTACACAATCACCAAGTCTAGAGAGAGTTGGACTGAAGGAGAACACGACAAGTTTCTGGAAGCTCTTCAATTGTTTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 CGGAGAAGAAGGTGAGGAAAGCTTACACAATCACCAAGTCTAGAGAGAGTTGGACTGAAGGAGAACACGACAAGTTTCTGGAAGCTCTTCAATTGTTTGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G02 TCGTGACTGGAAAAAGATAGAAGATTTTGTTGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAATACTTTCTAAAGGTCCAAAAAAATGGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: RE_143 TCGTGACTGGAAAAAGATAGAAGATTTTGTTGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAATACTTTCTAAAGGTCCAAAAAAATCGG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G02 ACTTTAGCACATGTTCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCGAAAAATGCTCAAATGTCGCTTCACGTTTCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 ACTTTAGCACATGTTCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCGAAAAATGCTCAAATGTCGCTTCACGTTTCCA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G02 TGTCCTTTCCTACTCAAATAAATAACCTGCCTGGATATACTCCATGGGATGATGATACATCTGCATTGTTAAACATTGCTGTAAGTGGGGTTATTCCACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 TGTCCTTTCCTACTCAAATAAATAACCTGCCTGGATATACTCCATGGGATGATGATACATCTGCATTGTTAAACATTGCTGTAAGTGGGGTTATTCCACC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G02 AGAAGATGAACTTGATACTCTTTGTGGAGCAGAAGTTGATGTTGGATCAAATGACATGATAAGTGAAACTAGTCCTTCAGCATCTGGTATCGGAAGCTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 AGAAGATGAACTTGATACTCTTTGTGGAGCAGAAGTTGATGTTGGATCAAATGACATGATAAGTGAAACTAGTCCTTCAGCATCTGGTATCGGAAGCTCA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G02 AGCAGAACACTATCAGATTCTAAGGGTTTGAGACTGGCGAAACAAGCTCCCTCAATGCATGGTCTTCCTGATTTTGCTGAGGTTTATAACTTCATTGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 AGCAGAACACTATCAGATTCTAAGGGTTTGAGACTGGCGAAACAAGCTCCCTCAATGCATGGTCTTCCTGATTTTGCTGAGGTTTATAACTTCATTGGGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G02 GTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTTTTGCTGTTGATGAGAAACCTCACAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 GTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTTTTGCTGTTGATGAGAAACCTCACAGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 AT5G02 GAACTTGTCAAACCCTGACTTTGAACCTACTTCTGAATATGTTGATGCTGCAGAGGAAGGTCATGAACACTTAAGCTCT :::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 GAACTTGTCAGACCCTGACTTTGAACCTACTTCTGAATATGTTGATGCTGCAGAGGAAGGTCATGAACACTTAAGCTCT 810 820 830 840 850 860 870 10 20 30 40 50 60 70 80 90 100 AT5G02 MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 MTSTNPVVAEVIPAETSTDATETTIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNR 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G02 TLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLPGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDVGSNDMISETSPSASGIGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_143 TLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLPGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDVGSNDMISETSPSASGIGSS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT5G02 SRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEPTSEYVDAAEEGHEHLSS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: RE_143 SRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSDPDFEPTSEYVDAAEEGHEHLSS 210 220 230 240 250 260 270 280 290

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