◆◆◆RE_1445 detail◆◆◆

Code name	RE_1445
Locus	AT5G15310
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	<-RE_1448(080420)
sequence	>RE_1445_978bp ATGGGTAGATCACCGTGTCGTGACAAATTGGGTTTGAAGAAAGGACCTTGGACACCAGAGGAGGATCAGAAACTTTTAGCTTATATTGAAGAACATGGTC ATGGAAGTTGGCGTTCATTGCCTGAGAAAGCTGGTCTCCATCGATGCGGAAAGAGTTGTAGACTAAGATGGACTAACTACCTAAGACCTGACATCAAAAG AGGCAAATTCAACTTACAAGAAGAACAAACCATTATCCAACTCCATGCTCTGTTAGGAAACAGATGGTCAGCGATTGCTACTCATTTGCCAAAGAGAACA GACAACGAGATCAAGAACTATTGGAACACTCATTTGAAGAAACGGTTAGTGAAAATGGGGATTGATCCAGTGACTCATAAACCCAAAAACGAGACTCCTT TATCTTCTCTTGGTCTATCCAAGAACGCAGCTATACTTAGCCACACTGCTCAATGGGAAAGTGCAAGGCTTGAAGCTGAAGCAAGACTAGCTAGAGAATC AAAGCTTCTTCATTTACAACATTACCAAACCAAAACATCATCTCAACCTCATCATCATCATGGATTCACTCACAAGTCATTGTTACCTAATTGGACAACA AAACCACACGAAGATCAACAACAGCTTGAATCTCCGACATCTACAGTGTCATTCTCTGAGATGAAGGAATCAATCCCGGCGAAGATAGAGTTTGTCGGAT CATCAACTGGTGTGACTCTGATGAAAGAACCTGAACACGATTGGATCAATTCAACGATGCACGAGTTTGAAACTACGCAGATGGGAGAAGGAATCGAAGA AGGGTTCACGGGTCTCTTGCTCGGTGGTGATTCAATCGACCGGAGTTTCTCCGGCGATAAAAACGAGACGGCCGGCGAGAGTAGTGGTGGTGACTGCAAC TACTATGAGGACAACAAGAACTACTTGGACAGCATTTTTAACTTTGTAGATCCTTCACCGTCGGATTCACCGATGTTC >RE_1445_translated MGRSPCRDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRT DNEIKNYWNTHLKKRLVKMGIDPVTHKPKNETPLSSLGLSKNAAILSHTAQWESARLEAEARLARESKLLHLQHYQTKTSSQPHHHHGFTHKSLLPNWTT KPHEDQQQLESPTSTVSFSEMKESIPAKIEFVGSSTGVTLMKEPEHDWINSTMHEFETTQMGEGIEEGFTGLLLGGDSIDRSFSGDKNETAGESSGGDCN YYEDNKNYLDSIFNFVDPSPSDSPMF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 977/978 (99.9%)（アミノ酸配列で325/326 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G15 ATGGGTAGATCACCGTGTTGTGACAAATTGGGTTTGAAGAAAGGACCTTGGACACCAGAGGAGGATCAGAAACTTTTAGCTTATATTGAAGAACATGGTC :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 ATGGGTAGATCACCGTGTCGTGACAAATTGGGTTTGAAGAAAGGACCTTGGACACCAGAGGAGGATCAGAAACTTTTAGCTTATATTGAAGAACATGGTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G15 ATGGAAGTTGGCGTTCATTGCCTGAGAAAGCTGGTCTCCATCGATGCGGAAAGAGTTGTAGACTAAGATGGACTAACTACCTAAGACCTGACATCAAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 ATGGAAGTTGGCGTTCATTGCCTGAGAAAGCTGGTCTCCATCGATGCGGAAAGAGTTGTAGACTAAGATGGACTAACTACCTAAGACCTGACATCAAAAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G15 AGGCAAATTCAACTTACAAGAAGAACAAACCATTATCCAACTCCATGCTCTGTTAGGAAACAGATGGTCAGCGATTGCTACTCATTTGCCAAAGAGAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 AGGCAAATTCAACTTACAAGAAGAACAAACCATTATCCAACTCCATGCTCTGTTAGGAAACAGATGGTCAGCGATTGCTACTCATTTGCCAAAGAGAACA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G15 GACAACGAGATCAAGAACTATTGGAACACTCATTTGAAGAAACGGTTAGTGAAAATGGGGATTGATCCAGTGACTCATAAACCCAAAAACGAGACTCCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 GACAACGAGATCAAGAACTATTGGAACACTCATTTGAAGAAACGGTTAGTGAAAATGGGGATTGATCCAGTGACTCATAAACCCAAAAACGAGACTCCTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G15 TATCTTCTCTTGGTCTATCCAAGAACGCAGCTATACTTAGCCACACTGCTCAATGGGAAAGTGCAAGGCTTGAAGCTGAAGCAAGACTAGCTAGAGAATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 TATCTTCTCTTGGTCTATCCAAGAACGCAGCTATACTTAGCCACACTGCTCAATGGGAAAGTGCAAGGCTTGAAGCTGAAGCAAGACTAGCTAGAGAATC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G15 AAAGCTTCTTCATTTACAACATTACCAAACCAAAACATCATCTCAACCTCATCATCATCATGGATTCACTCACAAGTCATTGTTACCTAATTGGACAACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 AAAGCTTCTTCATTTACAACATTACCAAACCAAAACATCATCTCAACCTCATCATCATCATGGATTCACTCACAAGTCATTGTTACCTAATTGGACAACA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G15 AAACCACACGAAGATCAACAACAGCTTGAATCTCCGACATCTACAGTGTCATTCTCTGAGATGAAGGAATCAATCCCGGCGAAGATAGAGTTTGTCGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 AAACCACACGAAGATCAACAACAGCTTGAATCTCCGACATCTACAGTGTCATTCTCTGAGATGAAGGAATCAATCCCGGCGAAGATAGAGTTTGTCGGAT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G15 CATCAACTGGTGTGACTCTGATGAAAGAACCTGAACACGATTGGATCAATTCAACGATGCACGAGTTTGAAACTACGCAGATGGGAGAAGGAATCGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 CATCAACTGGTGTGACTCTGATGAAAGAACCTGAACACGATTGGATCAATTCAACGATGCACGAGTTTGAAACTACGCAGATGGGAGAAGGAATCGAAGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G15 AGGGTTCACGGGTCTCTTGCTCGGTGGTGATTCAATCGACCGGAGTTTCTCCGGCGATAAAAACGAGACGGCCGGCGAGAGTAGTGGTGGTGACTGCAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 AGGGTTCACGGGTCTCTTGCTCGGTGGTGATTCAATCGACCGGAGTTTCTCCGGCGATAAAAACGAGACGGCCGGCGAGAGTAGTGGTGGTGACTGCAAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 AT5G15 TACTATGAGGACAACAAGAACTACTTGGACAGCATTTTTAACTTTGTAGATCCTTCACCGTCGGATTCACCGATGTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 TACTATGAGGACAACAAGAACTACTTGGACAGCATTTTTAACTTTGTAGATCCTTCACCGTCGGATTCACCGATGTTC 910 920 930 940 950 960 970 10 20 30 40 50 60 70 80 90 100 AT5G15 MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRT :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 MGRSPCRDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G15 DNEIKNYWNTHLKKRLVKMGIDPVTHKPKNETPLSSLGLSKNAAILSHTAQWESARLEAEARLARESKLLHLQHYQTKTSSQPHHHHGFTHKSLLPNWTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 DNEIKNYWNTHLKKRLVKMGIDPVTHKPKNETPLSSLGLSKNAAILSHTAQWESARLEAEARLARESKLLHLQHYQTKTSSQPHHHHGFTHKSLLPNWTT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G15 KPHEDQQQLESPTSTVSFSEMKESIPAKIEFVGSSTGVTLMKEPEHDWINSTMHEFETTQMGEGIEEGFTGLLLGGDSIDRSFSGDKNETAGESSGGDCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_144 KPHEDQQQLESPTSTVSFSEMKESIPAKIEFVGSSTGVTLMKEPEHDWINSTMHEFETTQMGEGIEEGFTGLLLGGDSIDRSFSGDKNETAGESSGGDCN 210 220 230 240 250 260 270 280 290 300 310 320 AT5G15 YYEDNKNYLDSIFNFVDPSPSDSPMF :::::::::::::::::::::::::: RE_144 YYEDNKNYLDSIFNFVDPSPSDSPMF 310 320

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