fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01030.1 AGKRLRLFGVNMECG at 284/358 in AT1G01030.1
SSSSSALRLNLSTDHD at 319/358 in AT1G01030.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038767 AGKRLRLFGVNMDCP in 343/413 AT2G46870.1 1st_not 0.430531732 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01030.1     MD------------------------------LSLAPTTTTSS-----------------
pt038767_POPTR_ MNFVEGERGDFDKEEQGEEKQEGEEAVKTSKLLFSSPCTSSSSTKYTNFLPEHHNMWPGS
                *:                              *  :* *::**                 

AT1G01030.1     -DQEQDRDQELTSNIGASSSSGPS--------------GNNNNLPMMMIPPP-------E
pt038767_POPTR_ FDQSQQD----------SKTQEPSLNFDKKLELMELSLGNNNETERTSADAVVGARESIE
                 **.*:           *.:. **              ****:       .        *

AT1G01030.1     KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSY
pt038767_POPTR_ REHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLILNFEDRNGKPWRFRYSY
                :***********************************.*::* :***:***** *******

AT1G01030.1     WNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMS------
pt038767_POPTR_ WNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVG-ESGKHRLFIDWRRRPNAPDPTTFS
                ********************:************:* ** : :*:****:**: .      

AT1G01030.1     --LVQAHQFGNFGFNFNFPTTSQYSNRFHPLPEYN---SVPIHRGLNIGNH---QRSYYN
pt038767_POPTR_ HLELQNQQ--------HYPQSVRWG-RLYSIPQSNLSMQQPQLRHLNYSIHPYQQQQYQN
                   :* :*        ::* : ::. *::.:*: *   . *  * ** . *   *:.* *

AT1G01030.1     TQRQEF------VGYGYGNLAGRCYYTGSPLD------HRNIVGSE-PLVIDSVPVVPGR
pt038767_POPTR_ RNHQNHYHQPSTISYG----TSAQYYLRPPETLQIGAMHQQAGGSHVPLVIDSVPVVHGK
                 ::*:.      :.**    :.  **  .*        *::  **. ********** *:

AT1G01030.1     LTPVMLPPLPPPPSTAGKRLRLFGVNMECGNDYNQQEESWLVPRGEIG------ASSSSS
pt038767_POPTR_ --------------TAGKRLRLFGVNMDCPTQDDGQSSSITMTHGTMGSFSSHLASSSLP
                              *************:* .: : *..*  :.:* :*      **** .

AT1G01030.1     SALRLNLSTDHDDDNDDGDDGDDDQFAKKGKSSLSLNFNP
pt038767_POPTR_ PPLQLRAPTSAPMQA---------EFSKKGKNSLSFDLDL
                ..*:*. .*.   :          :*:****.***::::
BoxShade v3.31 C (beta, 970507) Output
AT1G01030.1     M D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S L A P T T T T S S - - - - - - - - - - - - - - - - -
pt038767_POPTR_    M N F V E G E R G D F D K E E Q G E E K Q E G E E A V K T S K L L F S S P C T S S S S T K Y T N F L P E H H N M W P G S
 
AT1G01030.1     - D Q E Q D R D Q E L T S N I G A S S S S G P S - - - - - - - - - - - - - - G N N N N L P M M M I P P P - - - - - - - E
pt038767_POPTR_    F D Q S Q Q D - - - - - - - - - - S K T Q E P S L N F D K K L E L M E L S L G N N N E T E R T S A D A V V G A R E S I E
 
AT1G01030.1     K E H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S N N Q N G T L L N F Q D R N G K M W R F R Y S Y
pt038767_POPTR_    R E H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L I L N F E D R N G K P W R F R Y S Y
 
AT1G01030.1     W N S S Q S Y V M T K G W S R F V K E K K L D A G D I V S F Q R G I G D E S E R S K L Y I D W R H R P D M S - - - - - -
pt038767_POPTR_    W N S S Q S Y V M T K G W S R F V K E K R L D A G D I V S F Q R G V G - E S G K H R L F I D W R R R P N A P D P T T F S
 
AT1G01030.1     - - L V Q A H Q F G N F G F N F N F P T T S Q Y S N R F H P L P E Y N - - - S V P I H R G L N I G N H - - - Q R S Y Y N
pt038767_POPTR_    H L E L Q N Q Q - - - - - - - - H Y P Q S V R W G - R L Y S I P Q S N L S M Q Q P Q L R H L N Y S I H P Y Q Q Q Q Y Q N
 
AT1G01030.1     T Q R Q E F - - - - - - V G Y G Y G N L A G R C Y Y T G S P L D - - - - - - H R N I V G S E - P L V I D S V P V V P G R
pt038767_POPTR_    R N H Q N H Y H Q P S T I S Y G - - - - T S A Q Y Y L R P P E T L Q I G A M H Q Q A G G S H V P L V I D S V P V V H G K
 
AT1G01030.1     L T P V M L P P L P P P P S T A G K R L R L F G V N M E C G N D Y N Q Q E E S W L V P R G E I G - - - - - - A S S S S S
pt038767_POPTR_    - - - - - - - - - - - - - - T A G K R L R L F G V N M D C P T Q D D G Q S S S I T M T H G T M G S F S S H L A S S S L P
 
AT1G01030.1     S A L R L N L S T D H D D D N D D G D D G D D D Q F A K K G K S S L S L N F N P
pt038767_POPTR_    P P L Q L R A P T S A P M Q A - - - - - - - - - E F S K K G K N S L S F D L D L
 
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