fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01030.1 AGKRLRLFGVNMECG at 284/358 in AT1G01030.1
SSSSSALRLNLSTDHD at 319/358 in AT1G01030.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016367 VGKRLRLFGVNMECP in 258/328 AT2G46870.1 not_not 0.409948542 III
Pt016366 VGKRLRLFGVNMECP in 258/328 AT2G46870.1 not_not 0.409948542 III
Pt016365 VGKRLRLFGVNMECP in 335/405 AT2G46870.1 not_not 0.409948542 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G01030.1     ---------------------MDLSL---APTTTTSS------------------DQ-EQ
pt016366_POPTR_ ------------------------------------------------------------
pt016365_POPTR_ MNFVGGERGYFDKEEQEEEEAMSSKLPFASPCTSSSSSKYKNFLPEHQNLWPRLFDQPRQ
pt016367_POPTR_ ------------------------------------------------------------
                                                                            

AT1G01030.1     D----------------RDQELTSNIGASSSSGPSGNNNNLPMMMIPPPEKEHMFDKVVT
pt016366_POPTR_ -----------------MELSLGNNNESESSSTDAGGGASESI------EREHMFDKVVT
pt016365_POPTR_ DSETQEPSLNFVKKLEFMELSLGNNNESESSSTDAGGGASESI------EREHMFDKVVT
pt016367_POPTR_ -----------------MELSLGNNNESESSSTDAGGGASESI------EREHMFDKVVT
                                  : .* .*  :.***  :*.. . .:      *:*********

AT1G01030.1     PSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMT
pt016366_POPTR_ PSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMT
pt016365_POPTR_ PSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMT
pt016367_POPTR_ PSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMT
                **************************.*::* ****:***** *****************

AT1G01030.1     KGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQAHQFGNFGFNFNF
pt016366_POPTR_ KGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHY
pt016365_POPTR_ KGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHY
pt016367_POPTR_ KGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHY
                **********:* **********:* *: : :*:****:**: .   :... ::  ::::

AT1G01030.1     PTTSQYSNRFHPLPEYN---SVPIHRGLNIG----------NHQRSYYNTQRQEFVGYGY
pt016366_POPTR_ PQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPS-----NISY
pt016365_POPTR_ PQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPS-----NISY
pt016367_POPTR_ PQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPS-----NISY
                * : ::. *::.:*: *   . *  : ** .          ***  *::..     . .*

AT1G01030.1     GNLAGRCYYTGSPLD-------HRNIVGSEPLVIDSVPVVPGRLTPVMLPPLPPPPSTAG
pt016366_POPTR_ GNAAQ--YYLRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGK--------------TVG
pt016365_POPTR_ GNAAQ--YYLRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGK--------------TVG
pt016367_POPTR_ GNAAQ--YYLRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGK--------------TVG
                ** *   **  .* .       *.:  .  *:******** *:              *.*

AT1G01030.1     KRLRLFGVNMECGNDYNQQEESWLVPRGEIG------ASSSSSSALRLNLSTDHDDDNDD
pt016366_POPTR_ KRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVREPT--------
pt016365_POPTR_ KRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVREPT--------
pt016367_POPTR_ KRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVREPT--------
                ************ .: : ...  :: :* :.      **** ...:::. .*        

AT1G01030.1     GDDGDDDQ--FAKKGKSSLSLNFNP
pt016366_POPTR_ ---GAPMQAEFSKKGKASLSFDLDL
pt016365_POPTR_ ---GAPMQAEFSKKGKASLSFDLDL
pt016367_POPTR_ ---GAPMQAEFSKKGKASLSFDLDL
                   *   *  *:****:***::::
BoxShade v3.31 C (beta, 970507) Output
AT1G01030.1     - - - - - - - - - - - - - - - - - - - - - M D L S L - - - A P T T T T S S - - - - - - - - - - - - - - - - - - D Q - E Q
pt016366_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt016365_POPTR_    M N F V G G E R G Y F D K E E Q E E E E A M S S K L P F A S P C T S S S S S K Y K N F L P E H Q N L W P R L F D Q P R Q
pt016367_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G01030.1     D - - - - - - - - - - - - - - - - R D Q E L T S N I G A S S S S G P S G N N N N L P M M M I P P P E K E H M F D K V V T
pt016366_POPTR_    - - - - - - - - - - - - - - - - - M E L S L G N N N E S E S S S T D A G G G A S E S I - - - - - - E R E H M F D K V V T
pt016365_POPTR_    D S E T Q E P S L N F V K K L E F M E L S L G N N N E S E S S S T D A G G G A S E S I - - - - - - E R E H M F D K V V T
pt016367_POPTR_    - - - - - - - - - - - - - - - - - M E L S L G N N N E S E S S S T D A G G G A S E S I - - - - - - E R E H M F D K V V T
 
AT1G01030.1     P S D V G K L N R L V I P K Q H A E R Y F P L D S S N N Q N G T L L N F Q D R N G K M W R F R Y S Y W N S S Q S Y V M T
pt016366_POPTR_    P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L L L N F E D R N G K P W R F R Y S Y W N S S Q S Y V M T
pt016365_POPTR_    P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L L L N F E D R N G K P W R F R Y S Y W N S S Q S Y V M T
pt016367_POPTR_    P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L L L N F E D R N G K P W R F R Y S Y W N S S Q S Y V M T
 
AT1G01030.1     K G W S R F V K E K K L D A G D I V S F Q R G I G D E S E R S K L Y I D W R H R P D M S L V Q A H Q F G N F G F N F N F
pt016366_POPTR_    K G W S R F V K E K R L Y A G D I V S F Q R G V G - E T G K H R L F I D W R R R P N A P D P T S F S H L E L Q N Q L H Y
pt016365_POPTR_    K G W S R F V K E K R L Y A G D I V S F Q R G V G - E T G K H R L F I D W R R R P N A P D P T S F S H L E L Q N Q L H Y
pt016367_POPTR_    K G W S R F V K E K R L Y A G D I V S F Q R G V G - E T G K H R L F I D W R R R P N A P D P T S F S H L E L Q N Q L H Y
 
AT1G01030.1     P T T S Q Y S N R F H P L P E Y N - - - S V P I H R G L N I G - - - - - - - - - - N H Q R S Y Y N T Q R Q E F V G Y G Y
pt016366_POPTR_    P Q S L R W G - R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H N H Q Y H Y H Q P S - - - - - N I S Y
pt016365_POPTR_    P Q S L R W G - R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H N H Q Y H Y H Q P S - - - - - N I S Y
pt016367_POPTR_    P Q S L R W G - R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H N H Q Y H Y H Q P S - - - - - N I S Y
 
AT1G01030.1     G N L A G R C Y Y T G S P L D - - - - - - - H R N I V G S E P L V I D S V P V V P G R L T P V M L P P L P P P P S T A G
pt016366_POPTR_    G N A A Q - - Y Y L R P P A S T L P I G A V H E Q G G S H V P V V I D S V P V V H G K - - - - - - - - - - - - - - T V G
pt016365_POPTR_    G N A A Q - - Y Y L R P P A S T L P I G A V H E Q G G S H V P V V I D S V P V V H G K - - - - - - - - - - - - - - T V G
pt016367_POPTR_    G N A A Q - - Y Y L R P P A S T L P I G A V H E Q G G S H V P V V I D S V P V V H G K - - - - - - - - - - - - - - T V G
 
AT1G01030.1     K R L R L F G V N M E C G N D Y N Q Q E E S W L V P R G E I G - - - - - - A S S S S S S A L R L N L S T D H D D D N D D
pt016366_POPTR_    K R L R L F G V N M E C P T Q N D P S S S V T M I R H G T L D S L S P R L A S S S L P P P F Q V R E P T - - - - - - - -
pt016365_POPTR_    K R L R L F G V N M E C P T Q N D P S S S V T M I R H G T L D S L S P R L A S S S L P P P F Q V R E P T - - - - - - - -
pt016367_POPTR_    K R L R L F G V N M E C P T Q N D P S S S V T M I R H G T L D S L S P R L A S S S L P P P F Q V R E P T - - - - - - - -
 
AT1G01030.1     G D D G D D D Q - - F A K K G K S S L S L N F N P
pt016366_POPTR_    - - - G A P M Q A E F S K K G K A S L S F D L D L
pt016365_POPTR_    - - - G A P M Q A E F S K K G K A S L S F D L D L
pt016367_POPTR_    - - - G A P M Q A E F S K K G K A S L S F D L D L
 
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