Input
| Putative repression domain
|
|
AT1G01030.1 |
AGKRLRLFGVNMECG at 284/358 in AT1G01030.1 |
|
SSSSSALRLNLSTDHD at 319/358 in AT1G01030.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt016367 |
VGKRLRLFGVNMECP in 258/328 |
AT2G46870.1 |
not_not |
0.409948542 |
III |
Pt016366 |
VGKRLRLFGVNMECP in 258/328 |
AT2G46870.1 |
not_not |
0.409948542 |
III |
Pt016365 |
VGKRLRLFGVNMECP in 335/405 |
AT2G46870.1 |
not_not |
0.409948542 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G01030.1 ---------------------MDLSL---APTTTTSS------------------DQ-EQ
pt016366_POPTR_ ------------------------------------------------------------
pt016367_POPTR_ ------------------------------------------------------------
pt016365_POPTR_ MNFVGGERGYFDKEEQEEEEAMSSKLPFASPCTSSSSSKYKNFLPEHQNLWPRLFDQPRQ
AT1G01030.1 D----------------RDQELTSNIGASSSSGPSGNNNNLPMMMIPPPEKEHMFDKVVT
pt016366_POPTR_ -----------------MELSLGNNNESESSSTDAGGGASESI------EREHMFDKVVT
pt016367_POPTR_ -----------------MELSLGNNNESESSSTDAGGGASESI------EREHMFDKVVT
pt016365_POPTR_ DSETQEPSLNFVKKLEFMELSLGNNNESESSSTDAGGGASESI------EREHMFDKVVT
: .* .* :.*** :*.. . .: *:*********
AT1G01030.1 PSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMT
pt016366_POPTR_ PSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMT
pt016367_POPTR_ PSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMT
pt016365_POPTR_ PSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMT
**************************.*::* ****:***** *****************
AT1G01030.1 KGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQAHQFGNFGFNFNF
pt016366_POPTR_ KGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHY
pt016367_POPTR_ KGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHY
pt016365_POPTR_ KGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHY
**********:* **********:* *: : :*:****:**: . :... :: ::::
AT1G01030.1 PTTSQYSNRFHPLPEYN---SVPIHRGLNIG----------NHQRSYYNTQRQEFVGYGY
pt016366_POPTR_ PQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPS-----NISY
pt016367_POPTR_ PQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPS-----NISY
pt016365_POPTR_ PQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPS-----NISY
* : ::. *::.:*: * . * : ** . *** *::.. . .*
AT1G01030.1 GNLAGRCYYTGSPLD-------HRNIVGSEPLVIDSVPVVPGRLTPVMLPPLPPPPSTAG
pt016366_POPTR_ GNAAQ--YYLRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGK--------------TVG
pt016367_POPTR_ GNAAQ--YYLRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGK--------------TVG
pt016365_POPTR_ GNAAQ--YYLRPPASTLPIGAVHEQGGSHVPVVIDSVPVVHGK--------------TVG
** * ** .* . *.: . *:******** *: *.*
AT1G01030.1 KRLRLFGVNMECGNDYNQQEESWLVPRGEIG------ASSSSSSALRLNLSTDHDDDNDD
pt016366_POPTR_ KRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVREPT--------
pt016367_POPTR_ KRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVREPT--------
pt016365_POPTR_ KRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVREPT--------
************ .: : ... :: :* :. **** ...:::. .*
AT1G01030.1 GDDGDDDQ--FAKKGKSSLSLNFNP
pt016366_POPTR_ ---GAPMQAEFSKKGKASLSFDLDL
pt016367_POPTR_ ---GAPMQAEFSKKGKASLSFDLDL
pt016365_POPTR_ ---GAPMQAEFSKKGKASLSFDLDL
* * *:****:***::::
BoxShade v3.31 C (beta, 970507) Output
AT1G01030.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
D |
L |
S |
L |
- |
- |
- |
A |
P |
T |
T |
T |
T |
S |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
Q |
- |
E |
Q |
pt016366_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt016367_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt016365_POPTR_ |
M |
N |
F |
V |
G |
G |
E |
R |
G |
Y |
F |
D |
K |
E |
E |
Q |
E |
E |
E |
E |
A |
M |
S |
S |
K |
L |
P |
F |
A |
S |
P |
C |
T |
S |
S |
S |
S |
S |
K |
Y |
K |
N |
F |
L |
P |
E |
H |
Q |
N |
L |
W |
P |
R |
L |
F |
D |
Q |
P |
R |
Q |
|
AT1G01030.1 |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
D |
Q |
E |
L |
T |
S |
N |
I |
G |
A |
S |
S |
S |
S |
G |
P |
S |
G |
N |
N |
N |
N |
L |
P |
M |
M |
M |
I |
P |
P |
P |
E |
K |
E |
H |
M |
F |
D |
K |
V |
V |
T |
pt016366_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
E |
L |
S |
L |
G |
N |
N |
N |
E |
S |
E |
S |
S |
S |
T |
D |
A |
G |
G |
G |
A |
S |
E |
S |
I |
- |
- |
- |
- |
- |
- |
E |
R |
E |
H |
M |
F |
D |
K |
V |
V |
T |
pt016367_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
E |
L |
S |
L |
G |
N |
N |
N |
E |
S |
E |
S |
S |
S |
T |
D |
A |
G |
G |
G |
A |
S |
E |
S |
I |
- |
- |
- |
- |
- |
- |
E |
R |
E |
H |
M |
F |
D |
K |
V |
V |
T |
pt016365_POPTR_ |
D |
S |
E |
T |
Q |
E |
P |
S |
L |
N |
F |
V |
K |
K |
L |
E |
F |
M |
E |
L |
S |
L |
G |
N |
N |
N |
E |
S |
E |
S |
S |
S |
T |
D |
A |
G |
G |
G |
A |
S |
E |
S |
I |
- |
- |
- |
- |
- |
- |
E |
R |
E |
H |
M |
F |
D |
K |
V |
V |
T |
|
AT1G01030.1 |
P |
S |
D |
V |
G |
K |
L |
N |
R |
L |
V |
I |
P |
K |
Q |
H |
A |
E |
R |
Y |
F |
P |
L |
D |
S |
S |
N |
N |
Q |
N |
G |
T |
L |
L |
N |
F |
Q |
D |
R |
N |
G |
K |
M |
W |
R |
F |
R |
Y |
S |
Y |
W |
N |
S |
S |
Q |
S |
Y |
V |
M |
T |
pt016366_POPTR_ |
P |
S |
D |
V |
G |
K |
L |
N |
R |
L |
V |
I |
P |
K |
Q |
H |
A |
E |
R |
Y |
F |
P |
L |
D |
S |
S |
S |
N |
E |
K |
G |
L |
L |
L |
N |
F |
E |
D |
R |
N |
G |
K |
P |
W |
R |
F |
R |
Y |
S |
Y |
W |
N |
S |
S |
Q |
S |
Y |
V |
M |
T |
pt016367_POPTR_ |
P |
S |
D |
V |
G |
K |
L |
N |
R |
L |
V |
I |
P |
K |
Q |
H |
A |
E |
R |
Y |
F |
P |
L |
D |
S |
S |
S |
N |
E |
K |
G |
L |
L |
L |
N |
F |
E |
D |
R |
N |
G |
K |
P |
W |
R |
F |
R |
Y |
S |
Y |
W |
N |
S |
S |
Q |
S |
Y |
V |
M |
T |
pt016365_POPTR_ |
P |
S |
D |
V |
G |
K |
L |
N |
R |
L |
V |
I |
P |
K |
Q |
H |
A |
E |
R |
Y |
F |
P |
L |
D |
S |
S |
S |
N |
E |
K |
G |
L |
L |
L |
N |
F |
E |
D |
R |
N |
G |
K |
P |
W |
R |
F |
R |
Y |
S |
Y |
W |
N |
S |
S |
Q |
S |
Y |
V |
M |
T |
|
AT1G01030.1 |
K |
G |
W |
S |
R |
F |
V |
K |
E |
K |
K |
L |
D |
A |
G |
D |
I |
V |
S |
F |
Q |
R |
G |
I |
G |
D |
E |
S |
E |
R |
S |
K |
L |
Y |
I |
D |
W |
R |
H |
R |
P |
D |
M |
S |
L |
V |
Q |
A |
H |
Q |
F |
G |
N |
F |
G |
F |
N |
F |
N |
F |
pt016366_POPTR_ |
K |
G |
W |
S |
R |
F |
V |
K |
E |
K |
R |
L |
Y |
A |
G |
D |
I |
V |
S |
F |
Q |
R |
G |
V |
G |
- |
E |
T |
G |
K |
H |
R |
L |
F |
I |
D |
W |
R |
R |
R |
P |
N |
A |
P |
D |
P |
T |
S |
F |
S |
H |
L |
E |
L |
Q |
N |
Q |
L |
H |
Y |
pt016367_POPTR_ |
K |
G |
W |
S |
R |
F |
V |
K |
E |
K |
R |
L |
Y |
A |
G |
D |
I |
V |
S |
F |
Q |
R |
G |
V |
G |
- |
E |
T |
G |
K |
H |
R |
L |
F |
I |
D |
W |
R |
R |
R |
P |
N |
A |
P |
D |
P |
T |
S |
F |
S |
H |
L |
E |
L |
Q |
N |
Q |
L |
H |
Y |
pt016365_POPTR_ |
K |
G |
W |
S |
R |
F |
V |
K |
E |
K |
R |
L |
Y |
A |
G |
D |
I |
V |
S |
F |
Q |
R |
G |
V |
G |
- |
E |
T |
G |
K |
H |
R |
L |
F |
I |
D |
W |
R |
R |
R |
P |
N |
A |
P |
D |
P |
T |
S |
F |
S |
H |
L |
E |
L |
Q |
N |
Q |
L |
H |
Y |
|
AT1G01030.1 |
P |
T |
T |
S |
Q |
Y |
S |
N |
R |
F |
H |
P |
L |
P |
E |
Y |
N |
- |
- |
- |
S |
V |
P |
I |
H |
R |
G |
L |
N |
I |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
H |
Q |
R |
S |
Y |
Y |
N |
T |
Q |
R |
Q |
E |
F |
V |
G |
Y |
G |
Y |
pt016366_POPTR_ |
P |
Q |
S |
L |
R |
W |
G |
- |
R |
L |
Y |
S |
M |
P |
Q |
S |
N |
L |
P |
M |
Q |
Q |
P |
Q |
L |
Q |
H |
L |
N |
Y |
S |
I |
H |
P |
Y |
Q |
Q |
H |
Q |
H |
H |
N |
H |
Q |
Y |
H |
Y |
H |
Q |
P |
S |
- |
- |
- |
- |
- |
N |
I |
S |
Y |
pt016367_POPTR_ |
P |
Q |
S |
L |
R |
W |
G |
- |
R |
L |
Y |
S |
M |
P |
Q |
S |
N |
L |
P |
M |
Q |
Q |
P |
Q |
L |
Q |
H |
L |
N |
Y |
S |
I |
H |
P |
Y |
Q |
Q |
H |
Q |
H |
H |
N |
H |
Q |
Y |
H |
Y |
H |
Q |
P |
S |
- |
- |
- |
- |
- |
N |
I |
S |
Y |
pt016365_POPTR_ |
P |
Q |
S |
L |
R |
W |
G |
- |
R |
L |
Y |
S |
M |
P |
Q |
S |
N |
L |
P |
M |
Q |
Q |
P |
Q |
L |
Q |
H |
L |
N |
Y |
S |
I |
H |
P |
Y |
Q |
Q |
H |
Q |
H |
H |
N |
H |
Q |
Y |
H |
Y |
H |
Q |
P |
S |
- |
- |
- |
- |
- |
N |
I |
S |
Y |
|
AT1G01030.1 |
G |
N |
L |
A |
G |
R |
C |
Y |
Y |
T |
G |
S |
P |
L |
D |
- |
- |
- |
- |
- |
- |
- |
H |
R |
N |
I |
V |
G |
S |
E |
P |
L |
V |
I |
D |
S |
V |
P |
V |
V |
P |
G |
R |
L |
T |
P |
V |
M |
L |
P |
P |
L |
P |
P |
P |
P |
S |
T |
A |
G |
pt016366_POPTR_ |
G |
N |
A |
A |
Q |
- |
- |
Y |
Y |
L |
R |
P |
P |
A |
S |
T |
L |
P |
I |
G |
A |
V |
H |
E |
Q |
G |
G |
S |
H |
V |
P |
V |
V |
I |
D |
S |
V |
P |
V |
V |
H |
G |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
V |
G |
pt016367_POPTR_ |
G |
N |
A |
A |
Q |
- |
- |
Y |
Y |
L |
R |
P |
P |
A |
S |
T |
L |
P |
I |
G |
A |
V |
H |
E |
Q |
G |
G |
S |
H |
V |
P |
V |
V |
I |
D |
S |
V |
P |
V |
V |
H |
G |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
V |
G |
pt016365_POPTR_ |
G |
N |
A |
A |
Q |
- |
- |
Y |
Y |
L |
R |
P |
P |
A |
S |
T |
L |
P |
I |
G |
A |
V |
H |
E |
Q |
G |
G |
S |
H |
V |
P |
V |
V |
I |
D |
S |
V |
P |
V |
V |
H |
G |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
V |
G |
|
AT1G01030.1 |
K |
R |
L |
R |
L |
F |
G |
V |
N |
M |
E |
C |
G |
N |
D |
Y |
N |
Q |
Q |
E |
E |
S |
W |
L |
V |
P |
R |
G |
E |
I |
G |
- |
- |
- |
- |
- |
- |
A |
S |
S |
S |
S |
S |
S |
A |
L |
R |
L |
N |
L |
S |
T |
D |
H |
D |
D |
D |
N |
D |
D |
pt016366_POPTR_ |
K |
R |
L |
R |
L |
F |
G |
V |
N |
M |
E |
C |
P |
T |
Q |
N |
D |
P |
S |
S |
S |
V |
T |
M |
I |
R |
H |
G |
T |
L |
D |
S |
L |
S |
P |
R |
L |
A |
S |
S |
S |
L |
P |
P |
P |
F |
Q |
V |
R |
E |
P |
T |
- |
- |
- |
- |
- |
- |
- |
- |
pt016367_POPTR_ |
K |
R |
L |
R |
L |
F |
G |
V |
N |
M |
E |
C |
P |
T |
Q |
N |
D |
P |
S |
S |
S |
V |
T |
M |
I |
R |
H |
G |
T |
L |
D |
S |
L |
S |
P |
R |
L |
A |
S |
S |
S |
L |
P |
P |
P |
F |
Q |
V |
R |
E |
P |
T |
- |
- |
- |
- |
- |
- |
- |
- |
pt016365_POPTR_ |
K |
R |
L |
R |
L |
F |
G |
V |
N |
M |
E |
C |
P |
T |
Q |
N |
D |
P |
S |
S |
S |
V |
T |
M |
I |
R |
H |
G |
T |
L |
D |
S |
L |
S |
P |
R |
L |
A |
S |
S |
S |
L |
P |
P |
P |
F |
Q |
V |
R |
E |
P |
T |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT1G01030.1 |
G |
D |
D |
G |
D |
D |
D |
Q |
- |
- |
F |
A |
K |
K |
G |
K |
S |
S |
L |
S |
L |
N |
F |
N |
P |
pt016366_POPTR_ |
- |
- |
- |
G |
A |
P |
M |
Q |
A |
E |
F |
S |
K |
K |
G |
K |
A |
S |
L |
S |
F |
D |
L |
D |
L |
pt016367_POPTR_ |
- |
- |
- |
G |
A |
P |
M |
Q |
A |
E |
F |
S |
K |
K |
G |
K |
A |
S |
L |
S |
F |
D |
L |
D |
L |
pt016365_POPTR_ |
- |
- |
- |
G |
A |
P |
M |
Q |
A |
E |
F |
S |
K |
K |
G |
K |
A |
S |
L |
S |
F |
D |
L |
D |
L |
|
|