fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01030.1 AGKRLRLFGVNMECG at 284/358 in AT1G01030.1
SSSSSALRLNLSTDHD at 319/358 in AT1G01030.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038767 AGKRLRLFGVNMDCP in 343/413 AT2G46870.1 1st_not 0.430531732 II
Pt016367 VGKRLRLFGVNMECP in 258/328 AT2G46870.1 not_not 0.409948542 III
Pt016366 VGKRLRLFGVNMECP in 258/328 AT2G46870.1 not_not 0.409948542 III
Pt016365 VGKRLRLFGVNMECP in 335/405 AT2G46870.1 not_not 0.409948542 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G01030.1     MD------------------------------LSLAPTTTTSS-----------------
pt016365_POPTR_ MNFVGGERGYFDKEEQ-----EEEEAM-SSKLPFASPCTSSSSSKYKNFLPEHQNLWPRL
pt016366_POPTR_ ------------------------------------------------------------
pt038767_POPTR_ MNFVEGERGDFDKEEQGEEKQEGEEAVKTSKLLFSSPCTSSSSTKYTNFLPEHHNMWPGS
pt016367_POPTR_ ------------------------------------------------------------
                                                                            

AT1G01030.1     -DQEQ--DRDQE-----------LTSNIG------ASSSSGPSGNNNNLPMMMIPPPEKE
pt016365_POPTR_ FDQPRQDSETQEPSLNFVKKLEFMELSLGNNNESESSSTDAGGGASESI--------ERE
pt016366_POPTR_ -----------------------MELSLGNNNESESSSTDAGGGASESI--------ERE
pt038767_POPTR_ FDQSQQDSKTQEPSLNFDKKLELMELSLGNNNETERTSADAVVGARESI--------ERE
pt016367_POPTR_ -----------------------MELSLGNNNESESSSTDAGGGASESI--------ERE
                                       :  .:*       :*:..  *  :.:        *:*

AT1G01030.1     HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWN
pt016365_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWN
pt016366_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWN
pt038767_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLILNFEDRNGKPWRFRYSYWN
pt016367_POPTR_ HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWN
                **********************************.*::* :***:***** *********

AT1G01030.1     SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQAHQFG
pt016365_POPTR_ SSQSYVMTKGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHL
pt016366_POPTR_ SSQSYVMTKGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHL
pt038767_POPTR_ SSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVG-ESGKHRLFIDWRRRPNAPDPTTFSHL
pt016367_POPTR_ SSQSYVMTKGWSRFVKEKRLYAGDIVSFQRGVG-ETGKHRLFIDWRRRPNAPDPTSFSHL
                ******************:* **********:* *: : :*:****:**: .   :... 

AT1G01030.1     NFGFNFNFPTTSQYSNRFHPLPEYN---SVPIHRGLNIG------------NHQRSYYNT
pt016365_POPTR_ ELQNQLHYPQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHH--NHQYHYHQP
pt016366_POPTR_ ELQNQLHYPQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHH--NHQYHYHQP
pt038767_POPTR_ ELQNQQHYPQSVRWG-RLYSIPQSNLSMQQPQLRHLNYSIHPYQQQQYQNRNHQNHYHQP
pt016367_POPTR_ ELQNQLHYPQSLRWG-RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHH--NHQYHYHQP
                ::  : ::* : ::. *::.:*: *   . *  : ** .            ***  *::.

AT1G01030.1     QRQEFVGYGYGNLAGRCYYTGSPLD-------HRNIVGSE-PLVIDSVPVVPGRLTPVML
pt016365_POPTR_ SN-----ISYGNAAQ--YYLRPPASTLPIGAVHEQ-GGSHVPVVIDSVPVVHGK------
pt016366_POPTR_ SN-----ISYGNAAQ--YYLRPPASTLPIGAVHEQ-GGSHVPVVIDSVPVVHGK------
pt038767_POPTR_ ST-----ISYGTSAQ--YYLRPP-ETLQIGAMHQQAGGSHVPLVIDSVPVVHGK------
pt016367_POPTR_ SN-----ISYGNAAQ--YYLRPPASTLPIGAVHEQ-GGSHVPVVIDSVPVVHGK------
                .       .**. *   **  .* .       *.:  **. *:******** *:      

AT1G01030.1     PPLPPPPSTAGKRLRLFGVNMECGNDYNQQEESWLVPRGEIG------ASSSSSSALRLN
pt016365_POPTR_ --------TVGKRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVR
pt016366_POPTR_ --------TVGKRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVR
pt038767_POPTR_ --------TAGKRLRLFGVNMDCPTQDDGQSSSITMTHGTMGSFSSHLASSSLPPPLQLR
pt016367_POPTR_ --------TVGKRLRLFGVNMECPTQNDPSSSVTMIRHGTLDSLSPRLASSSLPPPFQVR
                        *.***********:* .: : ...   : :* :.      **** ...:::.

AT1G01030.1     LSTDHDDDNDDGDDGDDDQFAKKGKSSLSLNFNP
pt016365_POPTR_ EPTGAPMQA---------EFSKKGKASLSFDLDL
pt016366_POPTR_ EPTGAPMQA---------EFSKKGKASLSFDLDL
pt038767_POPTR_ APTSAPMQA---------EFSKKGKNSLSFDLDL
pt016367_POPTR_ EPTGAPMQA---------EFSKKGKASLSFDLDL
                 .*.   :          :*:**** ***::::
BoxShade v3.31 C (beta, 970507) Output
AT1G01030.1     M D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S L A P T T T T S S - - - - - - - - - - - - - - - - -
pt016365_POPTR_    M N F V G G E R G Y F D K E E Q - - - - - E E E E A M - S S K L P F A S P C T S S S S S K Y K N F L P E H Q N L W P R L
pt016366_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038767_POPTR_    M N F V E G E R G D F D K E E Q G E E K Q E G E E A V K T S K L L F S S P C T S S S S T K Y T N F L P E H H N M W P G S
pt016367_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G01030.1     - D Q E Q - - D R D Q E - - - - - - - - - - - L T S N I G - - - - - - A S S S S G P S G N N N N L P M M M I P P P E K E
pt016365_POPTR_    F D Q P R Q D S E T Q E P S L N F V K K L E F M E L S L G N N N E S E S S S T D A G G G A S E S I - - - - - - - - E R E
pt016366_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - M E L S L G N N N E S E S S S T D A G G G A S E S I - - - - - - - - E R E
pt038767_POPTR_    F D Q S Q Q D S K T Q E P S L N F D K K L E L M E L S L G N N N E T E R T S A D A V V G A R E S I - - - - - - - - E R E
pt016367_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - M E L S L G N N N E S E S S S T D A G G G A S E S I - - - - - - - - E R E
 
AT1G01030.1     H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S N N Q N G T L L N F Q D R N G K M W R F R Y S Y W N
pt016365_POPTR_    H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L L L N F E D R N G K P W R F R Y S Y W N
pt016366_POPTR_    H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L L L N F E D R N G K P W R F R Y S Y W N
pt038767_POPTR_    H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L I L N F E D R N G K P W R F R Y S Y W N
pt016367_POPTR_    H M F D K V V T P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L L L N F E D R N G K P W R F R Y S Y W N
 
AT1G01030.1     S S Q S Y V M T K G W S R F V K E K K L D A G D I V S F Q R G I G D E S E R S K L Y I D W R H R P D M S L V Q A H Q F G
pt016365_POPTR_    S S Q S Y V M T K G W S R F V K E K R L Y A G D I V S F Q R G V G - E T G K H R L F I D W R R R P N A P D P T S F S H L
pt016366_POPTR_    S S Q S Y V M T K G W S R F V K E K R L Y A G D I V S F Q R G V G - E T G K H R L F I D W R R R P N A P D P T S F S H L
pt038767_POPTR_    S S Q S Y V M T K G W S R F V K E K R L D A G D I V S F Q R G V G - E S G K H R L F I D W R R R P N A P D P T T F S H L
pt016367_POPTR_    S S Q S Y V M T K G W S R F V K E K R L Y A G D I V S F Q R G V G - E T G K H R L F I D W R R R P N A P D P T S F S H L
 
AT1G01030.1     N F G F N F N F P T T S Q Y S N R F H P L P E Y N - - - S V P I H R G L N I G - - - - - - - - - - - - N H Q R S Y Y N T
pt016365_POPTR_    E L Q N Q L H Y P Q S L R W G - R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H - - N H Q Y H Y H Q P
pt016366_POPTR_    E L Q N Q L H Y P Q S L R W G - R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H - - N H Q Y H Y H Q P
pt038767_POPTR_    E L Q N Q Q H Y P Q S V R W G - R L Y S I P Q S N L S M Q Q P Q L R H L N Y S I H P Y Q Q Q Q Y Q N R N H Q N H Y H Q P
pt016367_POPTR_    E L Q N Q L H Y P Q S L R W G - R L Y S M P Q S N L P M Q Q P Q L Q H L N Y S I H P Y Q Q H Q H H - - N H Q Y H Y H Q P
 
AT1G01030.1     Q R Q E F V G Y G Y G N L A G R C Y Y T G S P L D - - - - - - - H R N I V G S E - P L V I D S V P V V P G R L T P V M L
pt016365_POPTR_    S N - - - - - I S Y G N A A Q - - Y Y L R P P A S T L P I G A V H E Q - G G S H V P V V I D S V P V V H G K - - - - - -
pt016366_POPTR_    S N - - - - - I S Y G N A A Q - - Y Y L R P P A S T L P I G A V H E Q - G G S H V P V V I D S V P V V H G K - - - - - -
pt038767_POPTR_    S T - - - - - I S Y G T S A Q - - Y Y L R P P - E T L Q I G A M H Q Q A G G S H V P L V I D S V P V V H G K - - - - - -
pt016367_POPTR_    S N - - - - - I S Y G N A A Q - - Y Y L R P P A S T L P I G A V H E Q - G G S H V P V V I D S V P V V H G K - - - - - -
 
AT1G01030.1     P P L P P P P S T A G K R L R L F G V N M E C G N D Y N Q Q E E S W L V P R G E I G - - - - - - A S S S S S S A L R L N
pt016365_POPTR_    - - - - - - - - T V G K R L R L F G V N M E C P T Q N D P S S S V T M I R H G T L D S L S P R L A S S S L P P P F Q V R
pt016366_POPTR_    - - - - - - - - T V G K R L R L F G V N M E C P T Q N D P S S S V T M I R H G T L D S L S P R L A S S S L P P P F Q V R
pt038767_POPTR_    - - - - - - - - T A G K R L R L F G V N M D C P T Q D D G Q S S S I T M T H G T M G S F S S H L A S S S L P P P L Q L R
pt016367_POPTR_    - - - - - - - - T V G K R L R L F G V N M E C P T Q N D P S S S V T M I R H G T L D S L S P R L A S S S L P P P F Q V R
 
AT1G01030.1     L S T D H D D D N D D G D D G D D D Q F A K K G K S S L S L N F N P
pt016365_POPTR_    E P T G A P M Q A - - - - - - - - - E F S K K G K A S L S F D L D L
pt016366_POPTR_    E P T G A P M Q A - - - - - - - - - E F S K K G K A S L S F D L D L
pt038767_POPTR_    A P T S A P M Q A - - - - - - - - - E F S K K G K N S L S F D L D L
pt016367_POPTR_    E P T G A P M Q A - - - - - - - - - E F S K K G K A S L S F D L D L
 
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