fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01030.1 AGKRLRLFGVNMECG at 284/358 in AT1G01030.1
SSSSSALRLNLSTDHD at 319/358 in AT1G01030.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008337 SGKRLRLFGVNMECA in 283/406 AT1G01030.1 1st_1st 0.397941680 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01030.1     MDLSLAPTTTTSSDQEQDRDQELTSNIGASSSSGPSGNNNNLPMMMIPPPEKEHMFDKVV
gm008337_Glyma0 MDLSLG------SSKEEEEEGNL--------QQGGGGVVHHAHQVV----EKEHMFEKVA
                *****.      *.:*::.: :*        ..* .*  ::   ::    ******:**.

AT1G01030.1     TPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVM
gm008337_Glyma0 TPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKVWRFRYSYWNSSQSYVM
                *******************:*******.*::* ****:*****:****************

AT1G01030.1     TKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQAH----------
gm008337_Glyma0 TKGWSRFVKEKKLDAGDIVSFQRGLGD-LYRHRLYIDWKRRPDHA--HAHPPHHHDPLFL
                ************************:**   * :*****::*** :  :**          

AT1G01030.1     -QFGNFGFNFNFPTTSQYSNRFHPLPEYNSV---PIHRGLNIGNHQRSYYNTQRQEFVGY
gm008337_Glyma0 PSIRLYSLPPTMPPRYHHDHHFHHHLNYNNLFTFQQHQYQQLGAATTTHHNN-------Y
                 .:  :.:  .:*.  ::.::**   :**.:     *:  ::*    :::*.       *

AT1G01030.1     GYGNL-AGRCYYTGSPLDH-----------RNIVGSEPLVIDSVPVV----------PGR
gm008337_Glyma0 GYQNSGSGSLYYLRSSMSMGGGDQNLQGRGSNIV---PMIIDSVPVNVAHHNNNRHGNGG
                ** *  :*  **  *.:.             ***   *::******            * 

AT1G01030.1     LTPVMLPPLPPPPSTAGKRLRLFGVNMECGND----------------------------
gm008337_Glyma0 IT-------SGGTNCSGKRLRLFGVNMECASSAEDSKELSSGSAAHVTTAASSSSLHHQR
                :*       .  .. :*************...                            

AT1G01030.1     YNQQEESWLVPRGE--------------------IGASSSSSSALRLNLSTDHDDDNDDG
gm008337_Glyma0 LRQQQQGLGITKGPVLGLRCCLIWIPLCNLVSKLVGLATLSFAAFLLTLSLNNWPS----
                 .**::.  :.:*                     :* :: * :*: *.** ::  .    

AT1G01030.1     DDGDDDQFAKKGKSSLSLNFNP--------------
gm008337_Glyma0 --------GYKGISSQTLFFFFSSSFFFLSVISTYK
                        . ** ** :* *
BoxShade v3.31 C (beta, 970507) Output
AT1G01030.1     M D L S L A P T T T T S S D Q E Q D R D Q E L T S N I G A S S S S G P S G N N N N L P M M M I P P P E K E H M F D K V V
gm008337_Glyma0    M D L S L G - - - - - - S S K E E E E E G N L - - - - - - - - Q Q G G G G V V H H A H Q V V - - - - E K E H M F E K V A
 
AT1G01030.1     T P S D V G K L N R L V I P K Q H A E R Y F P L D S S N N Q N G T L L N F Q D R N G K M W R F R Y S Y W N S S Q S Y V M
gm008337_Glyma0    T P S D V G K L N R L V I P K Q H A E K Y F P L D S S T N E K G L L L N F E D R N G K V W R F R Y S Y W N S S Q S Y V M
 
AT1G01030.1     T K G W S R F V K E K K L D A G D I V S F Q R G I G D E S E R S K L Y I D W R H R P D M S L V Q A H - - - - - - - - - -
gm008337_Glyma0    T K G W S R F V K E K K L D A G D I V S F Q R G L G D - L Y R H R L Y I D W K R R P D H A - - H A H P P H H H D P L F L
 
AT1G01030.1     - Q F G N F G F N F N F P T T S Q Y S N R F H P L P E Y N S V - - - P I H R G L N I G N H Q R S Y Y N T Q R Q E F V G Y
gm008337_Glyma0    P S I R L Y S L P P T M P P R Y H H D H H F H H H L N Y N N L F T F Q Q H Q Y Q Q L G A A T T T H H N N - - - - - - - Y
 
AT1G01030.1     G Y G N L - A G R C Y Y T G S P L D H - - - - - - - - - - - R N I V G S E P L V I D S V P V V - - - - - - - - - - P G R
gm008337_Glyma0    G Y Q N S G S G S L Y Y L R S S M S M G G G D Q N L Q G R G S N I V - - - P M I I D S V P V N V A H H N N N R H G N G G
 
AT1G01030.1     L T P V M L P P L P P P P S T A G K R L R L F G V N M E C G N D - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm008337_Glyma0    I T - - - - - - - S G G T N C S G K R L R L F G V N M E C A S S A E D S K E L S S G S A A H V T T A A S S S S L H H Q R
 
AT1G01030.1     Y N Q Q E E S W L V P R G E - - - - - - - - - - - - - - - - - - - - I G A S S S S S S A L R L N L S T D H D D D N D D G
gm008337_Glyma0    L R Q Q Q Q G L G I T K G P V L G L R C C L I W I P L C N L V S K L V G L A T L S F A A F L L T L S L N N W P S - - - -
 
AT1G01030.1     D D G D D D Q F A K K G K S S L S L N F N P - - - - - - - - - - - - - -
gm008337_Glyma0    - - - - - - - - G Y K G I S S Q T L F F F F S S S F F F L S V I S T Y K
 
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