fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023173 not found in 393aa AT5G52660.1 not_not 0.413559322 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01520.1     MVTVNPSQAHCLPMKM---SLPGFNTLPHTATTIPVSIRSNRTMSFFEDPTKKVRKPYTI
pp023173_Pp1s46 ---MNAASVEMLGVMVAGSTVPG----------IP-------SVSVSEEGSKKIRKPYTI
                   :*.:... * : :   ::**          **       ::*. *: :**:******

AT1G01520.1     TKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKVQKNGTKEH
pp023173_Pp1s46 TKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTGEH
                *****.*************:*********:*************************** **

AT1G01520.1     LPPPRPKRKANHPYPQKAPK---------FTLSSSNALFQHDYLYNTNSHPVISTTRKHG
pp023173_Pp1s46 VPPPRPKRKSAQPYPQKAPKCGIKSEVEGVSLTAVRA--------SSNS---ISGSSPGG
                :********: :********         .:*:: .*        .:**   ** :   *

AT1G01520.1     LVHCDVSIPSSVIKEEFGVSENCCSTSSSRDKQRTRIVTETNDQESCGKPHRVAPNFAEV
pp023173_Pp1s46 W-------PQHVLPASQIAPESCI---------------------------RAAPDFTEV
                        *. *:  .  ..*.*                            *.**:*:**

AT1G01520.1     YNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSVNLTSPEFDEQRKLIS------
pp023173_Pp1s46 YKFIGSVFDPGVSGHLRKLKEMSPIDRETVLLLMRNLSINLASPDFEEHKLYLSVYVNKE
                *:******** .:**:::****.**: *******:***:**:**:*:*::  :*      

AT1G01520.1     ------------------------------------------------------------
pp023173_Pp1s46 IKGKSTGTQDLTSAPSAAAQSSSDTGEDTSSVSGQAGTPQSNALLVSPRSGDADHTQQRA
                                                                            

AT1G01520.1     -----------------------------SYNAS--------------------------
pp023173_Pp1s46 SLLLAYSDNTADAGTPRRHSYDGGGAISASYTSSGVSPSPGDLEPVSLGPPSAALQPQIP
                                             **.:*                          

AT1G01520.1     --------------------------------------
pp023173_Pp1s46 VLTMKPERVYSAPSLPSLTSLPSLPAGLVDGSVDTWWT
BoxShade v3.31 C (beta, 970507) Output
AT1G01520.1     M V T V N P S Q A H C L P M K M - - - S L P G F N T L P H T A T T I P V S I R S N R T M S F F E D P T K K V R K P Y T I
pp023173_Pp1s46    - - - M N A A S V E M L G V M V A G S T V P G - - - - - - - - - - I P - - - - - - - S V S V S E E G S K K I R K P Y T I
 
AT1G01520.1     T K S R E N W T E Q E H D K F L E A L H L F D R D W K K I K A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T K E H
pp023173_Pp1s46    T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H
 
AT1G01520.1     L P P P R P K R K A N H P Y P Q K A P K - - - - - - - - - F T L S S S N A L F Q H D Y L Y N T N S H P V I S T T R K H G
pp023173_Pp1s46    V P P P R P K R K S A Q P Y P Q K A P K C G I K S E V E G V S L T A V R A - - - - - - - - S S N S - - - I S G S S P G G
 
AT1G01520.1     L V H C D V S I P S S V I K E E F G V S E N C C S T S S S R D K Q R T R I V T E T N D Q E S C G K P H R V A P N F A E V
pp023173_Pp1s46    W - - - - - - - P Q H V L P A S Q I A P E S C I - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A P D F T E V
 
AT1G01520.1     Y N F I G S V F D P K T T G H V K R L K E M D P I N L E T V L L L M K N L S V N L T S P E F D E Q R K L I S - - - - - -
pp023173_Pp1s46    Y K F I G S V F D P G V S G H L R K L K E M S P I D R E T V L L L M R N L S I N L A S P D F E E H K L Y L S V Y V N K E
 
AT1G01520.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023173_Pp1s46    I K G K S T G T Q D L T S A P S A A A Q S S S D T G E D T S S V S G Q A G T P Q S N A L L V S P R S G D A D H T Q Q R A
 
AT1G01520.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Y N A S - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023173_Pp1s46    S L L L A Y S D N T A D A G T P R R H S Y D G G G A I S A S Y T S S G V S P S P G D L E P V S L G P P S A A L Q P Q I P
 
AT1G01520.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023173_Pp1s46    V L T M K P E R V Y S A P S L P S L T S L P S L P A G L V D G S V D T W W T
 
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