fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016621 not found in 356aa AT5G52660.2 1st_not 0.527118644 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01520.1     MVTVNPSQAHCL----PMK----MSLPGFNTLPHT----------------ATTIPVSIR
pt016621_POPTR_ MVSVNPNPALGFYFFDPMNNSSHMELPGVNFLPPTNTNTATDTCNDTVSAANTTTTTNNN
                **:***. *  :    **:    *.***.* ** *                 ** ... .

AT1G01520.1     SNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVI
pt016621_POPTR_ NHKLVSFSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVI
                .:: :** ***.**:***********.*************:*********:*********

AT1G01520.1     QIRSHAQKYFLKVQKNGTKEHLPPPRPKRKANHPYPQKAPKF---------TLSSSNALF
pt016621_POPTR_ QIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKSAAVASQVTGSFQSSSALL
                ***************.**.**:********* *********          ::.**.**:

AT1G01520.1     QHDYLYNTNSHPVISTTRKHGLVHCDV--SIP----SSVIKEEFG-----VSENCCSTSS
pt016621_POPTR_ EPGYLYRPDSTSVLGNPITSGALSTWSFNSVPPVSMSQMTNDDAGLAGPTIANKCCYSSS
                : .***..:* .*:... . * :      *:*    *.: ::: *     ::::** :**

AT1G01520.1     SRDKQRTRIVTETNDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMDPINLE
pt016621_POPTR_ NESASRTWQTGKIIDKRAQGKPERVMPDFAQVYSFIGNVFDPNGSDHLQRLKQMDPINLE
                ... .**  . :  *:.: ***.** *:**:**.***.****: :.*::***:*******

AT1G01520.1     TVLLLMKNLSVNLTSPEFDEQRKLISSYNAS-------------------------
pt016621_POPTR_ TVLLLMRNLSINLTSPEFEDHRRLLASYDVDSEKVNEGGAYRNTTVDRLGNPIPAI
                ******:***:*******:::*:*::**:..
BoxShade v3.31 C (beta, 970507) Output
AT1G01520.1     M V T V N P S Q A H C L - - - - P M K - - - - M S L P G F N T L P H T - - - - - - - - - - - - - - - - A T T I P V S I R
pt016621_POPTR_    M V S V N P N P A L G F Y F F D P M N N S S H M E L P G V N F L P P T N T N T A T D T C N D T V S A A N T T T T T N N N
 
AT1G01520.1     S N R T M S F F E D P T K K V R K P Y T I T K S R E N W T E Q E H D K F L E A L H L F D R D W K K I K A F V G S K T V I
pt016621_POPTR_    N H K L V S F S E D P N K K I R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I
 
AT1G01520.1     Q I R S H A Q K Y F L K V Q K N G T K E H L P P P R P K R K A N H P Y P Q K A P K F - - - - - - - - - T L S S S N A L F
pt016621_POPTR_    Q I R S H A Q K Y F L K V Q K S G T S E H V P P P R P K R K A A H P Y P Q K A P K S A A V A S Q V T G S F Q S S S A L L
 
AT1G01520.1     Q H D Y L Y N T N S H P V I S T T R K H G L V H C D V - - S I P - - - - S S V I K E E F G - - - - - V S E N C C S T S S
pt016621_POPTR_    E P G Y L Y R P D S T S V L G N P I T S G A L S T W S F N S V P P V S M S Q M T N D D A G L A G P T I A N K C C Y S S S
 
AT1G01520.1     S R D K Q R T R I V T E T N D Q E S C G K P H R V A P N F A E V Y N F I G S V F D P K T T G H V K R L K E M D P I N L E
pt016621_POPTR_    N E S A S R T W Q T G K I I D K R A Q G K P E R V M P D F A Q V Y S F I G N V F D P N G S D H L Q R L K Q M D P I N L E
 
AT1G01520.1     T V L L L M K N L S V N L T S P E F D E Q R K L I S S Y N A S - - - - - - - - - - - - - - - - - - - - - - - - -
pt016621_POPTR_    T V L L L M R N L S I N L T S P E F E D H R R L L A S Y D V D S E K V N E G G A Y R N T T V D R L G N P I P A I
 
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