fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023204 not found in 298aa AT5G52660.2 not_not 0.437288135 III
Os023203 not found in 298aa AT5G52660.2 not_not 0.437288135 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G01520.1     MVTVNPSQAHCLPMKMSLPGFNTLPHTATTIPVSIRSNRTMSFFEDPTKKVRKPYTITKS
Os023204_Os06t0 -MSSAPQQL----LDSSSPGPGPGPEVE----------------DDGGRRVRKPYTITKS
Os023203_Os06t0 -MSSAPQQL----LDSSSPGPGPGPEVE----------------DDGGRRVRKPYTITKS
                 ::  *.*     :. * ** .. *..                 :*  ::**********

AT1G01520.1     RENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKVQKNGTKEHLPP
Os023204_Os06t0 RESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPP
Os023203_Os06t0 RESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPP
                **.**: *********:*********:*:************************* *****

AT1G01520.1     PRPKRKANHPYPQK----APKFTL-SSSNALFQHDYLYNTNSHPVISTTRKHGLVHCDV-
Os023204_Os06t0 PRPKRKAAHPYPHKASKRAPQVVLPQQASHLMEQGCLIPMDISPVARNFNAN-----DVF
Os023203_Os06t0 PRPKRKAAHPYPHKASKRAPQVVLPQQASHLMEQGCLIPMDISPVARNFNAN-----DVF
                ******* ****:*    **:..* ..:. *:::. *   :  **  . . :     ** 

AT1G01520.1     SIPSSVIKEEF------GVSENCCSTSSSRDKQRTRIVTETNDQESCGKPHRVAPNFAEV
Os023204_Os06t0 SSWDSALAQSFSPRHTHGAANNC--SSSVESQSGTCPTSEAIEQEIMLPTLRAMPDFAQV
Os023203_Os06t0 SSWDSALAQSFSPRHTHGAANNC--SSSVESQSGTCPTSEAIEQEIMLPTLRAMPDFAQV
                *  .*.: :.*      *.::**  :** ..:. *  .:*: :**    . *. *:**:*

AT1G01520.1     YNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSVNLTSPEFDEQRKLISSYNAS-
Os023204_Os06t0 YNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPNFEAHRKVLASHGYGM
Os023203_Os06t0 YNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPNFEAHRKVLASHGYGM
                ***:**:***:*:**::**:*****::***********:***.*:*: :**:::*:. . 

AT1G01520.1     --------------------------
Os023204_Os06t0 DQVKHENLGDLGSTHTLHLPFMVTTK
Os023203_Os06t0 DQVKHENLGDLGSTHTLHLPFMVTTK
BoxShade v3.31 C (beta, 970507) Output
AT1G01520.1     M V T V N P S Q A H C L P M K M S L P G F N T L P H T A T T I P V S I R S N R T M S F F E D P T K K V R K P Y T I T K S
Os023204_Os06t0    - M S S A P Q Q L - - - - L D S S S P G P G P G P E V E - - - - - - - - - - - - - - - - D D G G R R V R K P Y T I T K S
Os023203_Os06t0    - M S S A P Q Q L - - - - L D S S S P G P G P G P E V E - - - - - - - - - - - - - - - - D D G G R R V R K P Y T I T K S
 
AT1G01520.1     R E N W T E Q E H D K F L E A L H L F D R D W K K I K A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T K E H L P P
Os023204_Os06t0    R E S W T D P E H D K F L E A L Q L F D R D W K K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P
Os023203_Os06t0    R E S W T D P E H D K F L E A L Q L F D R D W K K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P
 
AT1G01520.1     P R P K R K A N H P Y P Q K - - - - A P K F T L - S S S N A L F Q H D Y L Y N T N S H P V I S T T R K H G L V H C D V -
Os023204_Os06t0    P R P K R K A A H P Y P H K A S K R A P Q V V L P Q Q A S H L M E Q G C L I P M D I S P V A R N F N A N - - - - - D V F
Os023203_Os06t0    P R P K R K A A H P Y P H K A S K R A P Q V V L P Q Q A S H L M E Q G C L I P M D I S P V A R N F N A N - - - - - D V F
 
AT1G01520.1     S I P S S V I K E E F - - - - - - G V S E N C C S T S S S R D K Q R T R I V T E T N D Q E S C G K P H R V A P N F A E V
Os023204_Os06t0    S S W D S A L A Q S F S P R H T H G A A N N C - - S S S V E S Q S G T C P T S E A I E Q E I M L P T L R A M P D F A Q V
Os023203_Os06t0    S S W D S A L A Q S F S P R H T H G A A N N C - - S S S V E S Q S G T C P T S E A I E Q E I M L P T L R A M P D F A Q V
 
AT1G01520.1     Y N F I G S V F D P K T T G H V K R L K E M D P I N L E T V L L L M K N L S V N L T S P E F D E Q R K L I S S Y N A S -
Os023204_Os06t0    Y N F L G S I F D P E T S G H L Q R L R E M D P I D V E T V L L L M K N L S I N L T N P N F E A H R K V L A S H G Y G M
Os023203_Os06t0    Y N F L G S I F D P E T S G H L Q R L R E M D P I D V E T V L L L M K N L S I N L T N P N F E A H R K V L A S H G Y G M
 
AT1G01520.1     - - - - - - - - - - - - - - - - - - - - - - - - - -
Os023204_Os06t0    D Q V K H E N L G D L G S T H T L H L P F M V T T K
Os023203_Os06t0    D Q V K H E N L G D L G S T H T L H L P F M V T T K
 
0