fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.427118644 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01520.1     -----------------MVTVNPSQAHCLPMKMSLPGF------------------NTLP
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMS-TTPH--PLDPSVPAVAGGGKEEEEEAGRAREEAAAAA
                                 **::. : .*  *:. *:*..                   : .

AT1G01520.1     HTATTIPVSIRSNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKK
Sb033225_Sorbi1 AAPAAVPVPTVGNDDD---DDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKK
                 :.:::**.  .*      :* .::************.**: *********:********

AT1G01520.1     IKAFVGSKTVIQIRSHAQKYFLKVQKNGTKEHLPPPRPKRKANHPYPQKAPKFTLSSSNA
Sb033225_Sorbi1 IEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKALQV---
                *:*:************************* ************ ****:**.* :*.    

AT1G01520.1     LFQHDYLYNTNSH--------PVISTTRKHGLVHCDVSIPSSVIKEEF------GVSENC
Sb033225_Sorbi1 -----VLPQQASHIMEQGCGTPMDTAT-----VATDSSANDAFPVQHFSPRHTQGATYN-
                      * :  **        *: ::*     *  * *  .:.  :.*      *.: * 

AT1G01520.1     CSTSSSRDKQRTRIVTETNDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMD
Sb033225_Sorbi1 -NSSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHLQQLKEMD
                 .:**  .:. *  .:* .:*:    .  . *:**.****:**:***:*.**:::*****

AT1G01520.1     PINLETVLLLMKNLSVNLTSPEFDEQRKLISSYNAS-------------------
Sb033225_Sorbi1 PIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSHIHLPFMITSK
                **: ***********:*****:*:*:*:*:**: :*
BoxShade v3.31 C (beta, 970507) Output
AT1G01520.1     - - - - - - - - - - - - - - - - - M V T V N P S Q A H C L P M K M S L P G F - - - - - - - - - - - - - - - - - - N T L P
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S - T T P H - - P L D P S V P A V A G G G K E E E E E A G R A R E E A A A A A
 
AT1G01520.1     H T A T T I P V S I R S N R T M S F F E D P T K K V R K P Y T I T K S R E N W T E Q E H D K F L E A L H L F D R D W K K
Sb033225_Sorbi1    A A P A A V P V P T V G N D D D - - - D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K
 
AT1G01520.1     I K A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T K E H L P P P R P K R K A N H P Y P Q K A P K F T L S S S N A
Sb033225_Sorbi1    I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A L Q V - - -
 
AT1G01520.1     L F Q H D Y L Y N T N S H - - - - - - - - P V I S T T R K H G L V H C D V S I P S S V I K E E F - - - - - - G V S E N C
Sb033225_Sorbi1    - - - - - V L P Q Q A S H I M E Q G C G T P M D T A T - - - - - V A T D S S A N D A F P V Q H F S P R H T Q G A T Y N -
 
AT1G01520.1     C S T S S S R D K Q R T R I V T E T N D Q E S C G K P H R V A P N F A E V Y N F I G S V F D P K T T G H V K R L K E M D
Sb033225_Sorbi1    - N S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L Q Q L K E M D
 
AT1G01520.1     P I N L E T V L L L M K N L S V N L T S P E F D E Q R K L I S S Y N A S - - - - - - - - - - - - - - - - - - -
Sb033225_Sorbi1    P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H I H L P F M I T S K
 
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