fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.483050847 II
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.427118644 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G01520.1     -----------------MVTVNPSQAHCLPMKMS---LPGFN---------------TLP
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTPH---PLDPSVPAVAGGGKEEEEEAGRAREEAAAAA
Sb027895_Sorbi1 --------DPSPLTFLSMVSASAPPP---PLQSD---AAGSG------------------
                                 **: ...     *:. .    .* .                  

AT1G01520.1     HTATTIPVSIRSNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKK
Sb033225_Sorbi1 AAPAAVPVPTVGNDD---DDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKK
Sb027895_Sorbi1 -------------------EDASKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKK
                                   :* .::************.**: *********:********

AT1G01520.1     IKAFVGSKTVIQIRSHAQKYFLKVQKNGTKEHLPPPRPKRKANHPYPQKAPKFTL-----
Sb033225_Sorbi1 IEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKALQVVLP
Sb027895_Sorbi1 IEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNEPNYGLK
                *:*:************************* **:********* ****:**.*        

AT1G01520.1     SSSNALFQHDYLYNTNSHPVISTTRKHGLVHCDVSIP----SSVIKEEFGVSE---NCCS
Sb033225_Sorbi1 QQASHIMEQGCGTPMDTATVATDSSAND------AFP--VQHFSPRHTQGATY---NN--
Sb027895_Sorbi1 TDSSSIHRN------SGMNVSVSSWAHS------SIPQAVASTMVKEDLGAGTPGPNNFC
                 .:. : .:      .   *   :  :.      ::*        :.  *.     *   

AT1G01520.1     TSSSRDKQRTRIVTETNDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMDPI
Sb033225_Sorbi1 SSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHLQQLKEMDPI
Sb027895_Sorbi1 SSSTEGPPRTWQPGETNDQINQVPSLRLMPDFAEVYSFLGSVFDPSTSGHLQKLKEMNPI
                :**  .   *    * .:*     .    *:**.**.*:**:***.*.**:::****:**

AT1G01520.1     NLETVLLLMKNLSVNLTSPEFDEQRKLISSYNAS------------------------
Sb033225_Sorbi1 DAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSH-----IHLPFMITSK
Sb027895_Sorbi1 DVETALLLMRNLSINLTSPDFEDQRKLLSSYSTSDGLQLGSSRSSALAMSTPFM----
                : **.****:***:*****:*:::*:*:**: :*
BoxShade v3.31 C (beta, 970507) Output
AT1G01520.1     - - - - - - - - - - - - - - - - - M V T V N P S Q A H C L P M K M S - - - L P G F N - - - - - - - - - - - - - - - T L P
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P H - - - P L D P S V P A V A G G G K E E E E E A G R A R E E A A A A A
Sb027895_Sorbi1    - - - - - - - - D P S P L T F L S M V S A S A P P P - - - P L Q S D - - - A A G S G - - - - - - - - - - - - - - - - - -
 
AT1G01520.1     H T A T T I P V S I R S N R T M S F F E D P T K K V R K P Y T I T K S R E N W T E Q E H D K F L E A L H L F D R D W K K
Sb033225_Sorbi1    A A P A A V P V P T V G N D D - - - D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K
Sb027895_Sorbi1    - - - - - - - - - - - - - - - - - - - E D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K
 
AT1G01520.1     I K A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T K E H L P P P R P K R K A N H P Y P Q K A P K F T L - - - - -
Sb033225_Sorbi1    I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A L Q V V L P
Sb027895_Sorbi1    I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K A S K N E P N Y G L K
 
AT1G01520.1     S S S N A L F Q H D Y L Y N T N S H P V I S T T R K H G L V H C D V S I P - - - - S S V I K E E F G V S E - - - N C C S
Sb033225_Sorbi1    Q Q A S H I M E Q G C G T P M D T A T V A T D S S A N D - - - - - - A F P - - V Q H F S P R H T Q G A T Y - - - N N - -
Sb027895_Sorbi1    T D S S S I H R N - - - - - - S G M N V S V S S W A H S - - - - - - S I P Q A V A S T M V K E D L G A G T P G P N N F C
 
AT1G01520.1     T S S S R D K Q R T R I V T E T N D Q E S C G K P H R V A P N F A E V Y N F I G S V F D P K T T G H V K R L K E M D P I
Sb033225_Sorbi1    S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L Q Q L K E M D P I
Sb027895_Sorbi1    S S S T E G P P R T W Q P G E T N D Q I N Q V P S L R L M P D F A E V Y S F L G S V F D P S T S G H L Q K L K E M N P I
 
AT1G01520.1     N L E T V L L L M K N L S V N L T S P E F D E Q R K L I S S Y N A S - - - - - - - - - - - - - - - - - - - - - - - -
Sb033225_Sorbi1    D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H - - - - - I H L P F M I T S K
Sb027895_Sorbi1    D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y S T S D G L Q L G S S R S S A L A M S T P F M - - - -
 
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