fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023042 not found in 433aa AT4G27410.2 1st_not 0.428104575 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01720.1     MSEL----------LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPW
pp023042_Pp1s14 MVILASPTGGPVTQLQLPPGFRFHPTDEELVLHYLCRKAESHVFAIPVIAEIDLYKFDPW
                *  *          *****************:******. *: :*:*:********:***

AT1G01720.1     ELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI----GLPKPVGIK
pp023042_Pp1s14 DLPGKAIFGEREWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPIHTSVGGIRKIGVK
                :*** *::**:***************:****:*.********:****    *  : :*:*

AT1G01720.1     KALVFYAGKAPKGEKTNWIMHEYRLAD-VDRSVR-KKKNSLRLDDWVLCRIYNKKGATER
pp023042_Pp1s14 KALVFYKGRAPKGVKTNWIMHEYRLAEGVCASVHAHRKGSLRLDDWVLCRIYKKSTNAQR
                ****** *:**** ************: *  **: ::*.*************:*.  ::*

AT1G01720.1     RGP---PPPVVYGDEIMEEKPKVTEMVMPPPPQQTSEFAYFDTSDS---VPKLHTTDSSC
pp023042_Pp1s14 TGKERDSSSCV--EEVLASLPEIGEPKLALP--RLGSFTGFSEPDDNHFVEGLLTGENKS
                 *    ... *  :*:: . *:: *  :. *  : ..*: *. .*.   *  * * :...

AT1G01720.1     SEQVVSPEFT--------------------------------------------------
pp023042_Pp1s14 VEVESSPEFKRNILSLQRGLQPHQGTVGSHTLLGFNSKLPFGSKMARSMDGLFDNQQFDK
                 *   ****.                                                  

AT1G01720.1     -------------------------------------------------------SEVQS
pp023042_Pp1s14 FNRQVLELGPTSSQRPTTLSLRQPASDSAMRQVENVLMPLRPGVGTMPENRAISDEEVQS
                                                                       .****

AT1G01720.1     ---EPKWKDWSAVSNDNNNTLDFGFNY------IDATV-------DNAFGGGGSSNQMFP
pp023042_Pp1s14 TFRSTSIGQFSGASNNEGLESIFSFNYEQPRATINALLPGSTTGPNTELGFSGGSLSASP
                   ...  ::*..**::.    *.***      *:* :       :. :* .*.* .  *

AT1G01720.1     LQDMFMYMQKPY-------
pp023042_Pp1s14 PQ--YTRARAPNYSYNPSA
                 *  :   : *
BoxShade v3.31 C (beta, 970507) Output
AT1G01720.1     M S E L - - - - - - - - - - L Q L P P G F R F H P T D E E L V M H Y L C R K C A S Q S I A V P I I A E I D L Y K Y D P W
pp023042_Pp1s14    M V I L A S P T G G P V T Q L Q L P P G F R F H P T D E E L V L H Y L C R K A E S H V F A I P V I A E I D L Y K F D P W
 
AT1G01720.1     E L P G L A L Y G E K E W Y F F S P R D R K Y P N G S R P N R S A G S G Y W K A T G A D K P I - - - - G L P K P V G I K
pp023042_Pp1s14    D L P G K A I F G E R E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K P I H T S V G G I R K I G V K
 
AT1G01720.1     K A L V F Y A G K A P K G E K T N W I M H E Y R L A D - V D R S V R - K K K N S L R L D D W V L C R I Y N K K G A T E R
pp023042_Pp1s14    K A L V F Y K G R A P K G V K T N W I M H E Y R L A E G V C A S V H A H R K G S L R L D D W V L C R I Y K K S T N A Q R
 
AT1G01720.1     R G P - - - P P P V V Y G D E I M E E K P K V T E M V M P P P P Q Q T S E F A Y F D T S D S - - - V P K L H T T D S S C
pp023042_Pp1s14    T G K E R D S S S C V - - E E V L A S L P E I G E P K L A L P - - R L G S F T G F S E P D D N H F V E G L L T G E N K S
 
AT1G01720.1     S E Q V V S P E F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023042_Pp1s14    V E V E S S P E F K R N I L S L Q R G L Q P H Q G T V G S H T L L G F N S K L P F G S K M A R S M D G L F D N Q Q F D K
 
AT1G01720.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S E V Q S
pp023042_Pp1s14    F N R Q V L E L G P T S S Q R P T T L S L R Q P A S D S A M R Q V E N V L M P L R P G V G T M P E N R A I S D E E V Q S
 
AT1G01720.1     - - - E P K W K D W S A V S N D N N N T L D F G F N Y - - - - - - I D A T V - - - - - - - D N A F G G G G S S N Q M F P
pp023042_Pp1s14    T F R S T S I G Q F S G A S N N E G L E S I F S F N Y E Q P R A T I N A L L P G S T T G P N T E L G F S G G S L S A S P
 
AT1G01720.1     L Q D M F M Y M Q K P Y - - - - - - -
pp023042_Pp1s14    P Q - - Y T R A R A P N Y S Y N P S A
 
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