fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026234 not found in 1345aa AT1G01720.1 not_1st 0.426470588 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01720.1     MSELLQLPPGFRFHPTDEELVMHYLC--RKCASQSIAV-------PIIAE----------
Sb026234_Sorbi1 --SIILMP------------CMMYVCVFRDGAVRREGVVLLLPAGPQVPERVEAEPRRRV
                  .:: :*             * *:*  *. * :  .*       * :.*          

AT1G01720.1     --------------------------------------IDLYKYDPW---------ELP-
Sb026234_Sorbi1 RLLEGHRRRQARGHAQAARHQEGARLLRRQGAQGREDQLDHARVPPRRRRPLRPQEEQPQ
                                                      :*  :  *          * * 

AT1G01720.1     GLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYA
Sb026234_Sorbi1 GMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTPKPLAIKKALVFYA
                *:**************************:**************:* ***:.*********

AT1G01720.1     GKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVY
Sb026234_Sorbi1 GKAPKGEKTNWIMHEYRLADVDRSAR-KKNSLRLDDWVLCRIYNKKGGLEK---PSAVAG
                ************************.* ********************. *:   *..*. 

AT1G01720.1     GDEIMEEKPKVTEMVMPPPPQQTSEF-------------AYFD-TSDSVPKLHTTDSSCS
Sb026234_Sorbi1 GD----HKPMFAAAAVSSPPEQKPFVAAPGGLPPFPDLAAYYDRPSDSMPRLH-ADSSCS
                **    .** .:  .:..**:*.. .             **:* .***:*:** :*****

AT1G01720.1     EQVVSPEFTS---EVQSEPKWKDWS-AVSNDNNNTLDFGFNYIDATVDNAFGGGGSSNQM
Sb026234_Sorbi1 EQVLSPEQLACDREVQSQPKISEWERTFASDPVNPAG---SMLDPVV-----GGHAGDPL
                ***:***  :   ****:** .:*. :.:.*  *. .   . :*..*     ** :.: :

AT1G01720.1     FPLQDMFMYMQKPY
Sb026234_Sorbi1 --LQDILMYWGKPF
                  ***::**  **:
BoxShade v3.31 C (beta, 970507) Output
AT1G01720.1     M S E L L Q L P P G F R F H P T D E E L V M H Y L C - - R K C A S Q S I A V - - - - - - - P I I A E - - - - - - - - - -
Sb026234_Sorbi1    - - S I I L M P - - - - - - - - - - - - C M M Y V C V F R D G A V R R E G V V L L L P A G P Q V P E R V E A E P R R R V
 
AT1G01720.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I D L Y K Y D P W - - - - - - - - - E L P -
Sb026234_Sorbi1    R L L E G H R R R Q A R G H A Q A A R H Q E G A R L L R R Q G A Q G R E D Q L D H A R V P P R R R R P L R P Q E E Q P Q
 
AT1G01720.1     G L A L Y G E K E W Y F F S P R D R K Y P N G S R P N R S A G S G Y W K A T G A D K P I G L P K P V G I K K A L V F Y A
Sb026234_Sorbi1    G M A L Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G S G Y W K A T G A D K P V G T P K P L A I K K A L V F Y A
 
AT1G01720.1     G K A P K G E K T N W I M H E Y R L A D V D R S V R K K K N S L R L D D W V L C R I Y N K K G A T E R R G P P P P V V Y
Sb026234_Sorbi1    G K A P K G E K T N W I M H E Y R L A D V D R S A R - K K N S L R L D D W V L C R I Y N K K G G L E K - - - P S A V A G
 
AT1G01720.1     G D E I M E E K P K V T E M V M P P P P Q Q T S E F - - - - - - - - - - - - - A Y F D - T S D S V P K L H T T D S S C S
Sb026234_Sorbi1    G D - - - - H K P M F A A A A V S S P P E Q K P F V A A P G G L P P F P D L A A Y Y D R P S D S M P R L H - A D S S C S
 
AT1G01720.1     E Q V V S P E F T S - - - E V Q S E P K W K D W S - A V S N D N N N T L D F G F N Y I D A T V D N A F G G G G S S N Q M
Sb026234_Sorbi1    E Q V L S P E Q L A C D R E V Q S Q P K I S E W E R T F A S D P V N P A G - - - S M L D P V V - - - - - G G H A G D P L
 
AT1G01720.1     F P L Q D M F M Y M Q K P Y
Sb026234_Sorbi1    - - L Q D I L M Y W G K P F
 
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