fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039339 not found in 206aa AT1G01780.1 1st_1st 0.739726027 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01780.1     MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT
pt039339_POPTR_ MAFTGTLDKCKACDKTVYVVDMMSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKT
                *:********:.**********:*:**:*******:*:****** ***************

AT1G01780.1     HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM
pt039339_POPTR_ HFEQLFKEGGDFSKNFQKGKPERTHELIRTPSKLSSVFCGTQDKCSTCGKTVYPLEKVTM
                ********.*:****** **.*:. ** *****:**:********::* ********: *

AT1G01780.1     EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA
pt039339_POPTR_ EGECYHKTCFRCAHGGCPLTHSSYAALDGVLYCKVHFAQLFMEKGTYSHVLAGATHKRST
                ****:************.*******:**.****: ** *******.*:*** .*.*:*::

AT1G01780.1     SGNTLPPEPTEDVAVEAKEENGVSES--
pt039339_POPTR_ S--TPPPELAESNTEEAAAAEDKSEEQS
                *  * *** :*. : **   :. **.
BoxShade v3.31 C (beta, 970507) Output
AT1G01780.1     M S F T G T L D K C N V C D K T V Y V V D M L S I E G M P Y H K S C F R C T H C K G T L Q M S N Y S S M D G V L Y C K T
pt039339_POPTR_    M A F T G T L D K C K A C D K T V Y V V D M M S L E G V P Y H K S C F K C S H C K G T L V M S N Y S S M D G V L Y C K T
 
AT1G01780.1     H F E Q L F K E S G N F S K N F Q P G K T E K P - E L T R T P S K I S S I F C G T Q D K C A A C E K T V Y P L E K I Q M
pt039339_POPTR_    H F E Q L F K E G G D F S K N F Q K G K P E R T H E L I R T P S K L S S V F C G T Q D K C S T C G K T V Y P L E K V T M
 
AT1G01780.1     E G E C F H K T C F R C A H G G C T L T H S S Y A S L D S V L Y C R H H F N Q L F M E K G N Y A H V L Q A A N H R R T A
pt039339_POPTR_    E G E C Y H K T C F R C A H G G C P L T H S S Y A A L D G V L Y C K V H F A Q L F M E K G T Y S H V L A G A T H K R S T
 
AT1G01780.1     S G N T L P P E P T E D V A V E A K E E N G V S E S - -
pt039339_POPTR_    S - - T P P P E L A E S N T E E A A A A E D K S E E Q S
 
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