Input
| Putative repression domain
|
|
AT1G01780.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt017666 |
not found in 206aa |
AT1G01780.1 |
not_1st |
0.730593607 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G01780.1 MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT
pt017666_POPTR_ MAFTGTLDKCKACDKTVYFVDMMSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKT
*:********:.******.***:*:**:*******:*:****** ***************
AT1G01780.1 HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM
pt017666_POPTR_ HFEQLFKEGGDFSKNFQKGKPERTHDLSRIPSKLSSVFCGTQDKCSACGKTVYPLEKVTM
********.*:****** **.*:. :*:* ***:**:********:** ********: *
AT1G01780.1 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA
pt017666_POPTR_ EGECYHKTCFRCAHGGCPLTHSSYAALDGVLYCKVHFAQLFMEKGTYSHVLASAAHKRS-
****:************.*******:**.****: ** *******.*:*** :* *:*:
AT1G01780.1 SGNTLPPE-----PTEDVAVEAKEENGVSES
pt017666_POPTR_ --NSTPPELAGSNPEEGAAVE--EEKSEEQS
*: *** * *..*** **:. .:*
BoxShade v3.31 C (beta, 970507) Output
AT1G01780.1 |
M |
S |
F |
T |
G |
T |
L |
D |
K |
C |
N |
V |
C |
D |
K |
T |
V |
Y |
V |
V |
D |
M |
L |
S |
I |
E |
G |
M |
P |
Y |
H |
K |
S |
C |
F |
R |
C |
T |
H |
C |
K |
G |
T |
L |
Q |
M |
S |
N |
Y |
S |
S |
M |
D |
G |
V |
L |
Y |
C |
K |
T |
pt017666_POPTR_ |
M |
A |
F |
T |
G |
T |
L |
D |
K |
C |
K |
A |
C |
D |
K |
T |
V |
Y |
F |
V |
D |
M |
M |
S |
L |
E |
G |
V |
P |
Y |
H |
K |
S |
C |
F |
K |
C |
S |
H |
C |
K |
G |
T |
L |
V |
M |
S |
N |
Y |
S |
S |
M |
D |
G |
V |
L |
Y |
C |
K |
T |
|
AT1G01780.1 |
H |
F |
E |
Q |
L |
F |
K |
E |
S |
G |
N |
F |
S |
K |
N |
F |
Q |
P |
G |
K |
T |
E |
K |
P |
- |
E |
L |
T |
R |
T |
P |
S |
K |
I |
S |
S |
I |
F |
C |
G |
T |
Q |
D |
K |
C |
A |
A |
C |
E |
K |
T |
V |
Y |
P |
L |
E |
K |
I |
Q |
M |
pt017666_POPTR_ |
H |
F |
E |
Q |
L |
F |
K |
E |
G |
G |
D |
F |
S |
K |
N |
F |
Q |
K |
G |
K |
P |
E |
R |
T |
H |
D |
L |
S |
R |
I |
P |
S |
K |
L |
S |
S |
V |
F |
C |
G |
T |
Q |
D |
K |
C |
S |
A |
C |
G |
K |
T |
V |
Y |
P |
L |
E |
K |
V |
T |
M |
|
AT1G01780.1 |
E |
G |
E |
C |
F |
H |
K |
T |
C |
F |
R |
C |
A |
H |
G |
G |
C |
T |
L |
T |
H |
S |
S |
Y |
A |
S |
L |
D |
S |
V |
L |
Y |
C |
R |
H |
H |
F |
N |
Q |
L |
F |
M |
E |
K |
G |
N |
Y |
A |
H |
V |
L |
Q |
A |
A |
N |
H |
R |
R |
T |
A |
pt017666_POPTR_ |
E |
G |
E |
C |
Y |
H |
K |
T |
C |
F |
R |
C |
A |
H |
G |
G |
C |
P |
L |
T |
H |
S |
S |
Y |
A |
A |
L |
D |
G |
V |
L |
Y |
C |
K |
V |
H |
F |
A |
Q |
L |
F |
M |
E |
K |
G |
T |
Y |
S |
H |
V |
L |
A |
S |
A |
A |
H |
K |
R |
S |
- |
|
AT1G01780.1 |
S |
G |
N |
T |
L |
P |
P |
E |
- |
- |
- |
- |
- |
P |
T |
E |
D |
V |
A |
V |
E |
A |
K |
E |
E |
N |
G |
V |
S |
E |
S |
pt017666_POPTR_ |
- |
- |
N |
S |
T |
P |
P |
E |
L |
A |
G |
S |
N |
P |
E |
E |
G |
A |
A |
V |
E |
- |
- |
E |
E |
K |
S |
E |
E |
Q |
S |
|
|