fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G01780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb011141 not found in 200aa AT3G61230.1 1st_not 0.618721461 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G01780.1     MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT
Sb011141_Sorbi1 MSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSISSYSSMDGVLYCKT
                ****** ***:.*****:.:*:*: :*:.***:**:*:******.:*.************

AT1G01780.1     HFEQLFKESGNFSKNFQPGKTE-KPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM
Sb011141_Sorbi1 HFEQLFKETGTFSKKFQGGASSTKTDQAKAPSKLSSAFSGTQDKCAACQKTVYPLEKMTL
                ********:*.***:** * :. *.: :::***:** *.*********:********: :

AT1G01780.1     EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA
Sb011141_Sorbi1 EGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIQTAQTKKNE
                ***.:**:**:*:**** ** ****:*:.:***: **.*** ***.* *::*:*: ::. 

AT1G01780.1     SGNTLPPEPTEDVAVEAKEENGVSES
Sb011141_Sorbi1 AAEAAPEAPADAGAAEPEAA------
                :.:: *  *::  *.*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G01780.1     M S F T G T L D K C N V C D K T V Y V V D M L S I E G M P Y H K S C F R C T H C K G T L Q M S N Y S S M D G V L Y C K T
Sb011141_Sorbi1    M S F T G T Q D K C K T C D K T V H F I D L L T A D G V S Y H K T C F K C S H C K G T L S I S S Y S S M D G V L Y C K T
 
AT1G01780.1     H F E Q L F K E S G N F S K N F Q P G K T E - K P E L T R T P S K I S S I F C G T Q D K C A A C E K T V Y P L E K I Q M
Sb011141_Sorbi1    H F E Q L F K E T G T F S K K F Q G G A S S T K T D Q A K A P S K L S S A F S G T Q D K C A A C Q K T V Y P L E K M T L
 
AT1G01780.1     E G E C F H K T C F R C A H G G C T L T H S S Y A S L D S V L Y C R H H F N Q L F M E K G N Y A H V L Q A A N H R R T A
Sb011141_Sorbi1    E G E S Y H K S C F K C S H G G C I L T T S S Y A A L N G I L Y C K I H F S Q L F K E K G S Y N H L I Q T A Q T K K N E
 
AT1G01780.1     S G N T L P P E P T E D V A V E A K E E N G V S E S
Sb011141_Sorbi1    A A E A A P E A P A D A G A A E P E A A - - - - - -
 
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