Input
| Putative repression domain
|
|
AT1G01930.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt040308 |
not found in 640aa |
AT1G01930.1 |
1st_1st |
0.520283975 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G01930.1 MATTGAAATTEIGNPEYKQPRSIFDLTADFFDSCRLSNPSETQSAF---------GPPKT
pt040308_POPTR_ MATAPLLPTTNSTSQE-KRHRSIFDVPTDFFDACRLLSPSSSPSPASTSVAPEIPSPIET
***: .**: . * *: *****:.:****:*** .**.: *. .* :*
AT1G01930.1 FDPEEAEEDKSSKDG--VILDRWTCNTCKIEFLSLQDQRYHFKSDIHRLNIKLSVAGKAI
pt040308_POPTR_ LD----EVDTISKNGVEVTIPRWTCNTCKAEFDSLQDQRFHFKSDIHRINVKLSIAGKDI
:* * *. **:* * : ******** ** ******:********:*:***:*** *
AT1G01930.1 LKEEDVDELTSESVQDYDVSSISGSEDEAETRPPSFHFDAQKGI---DKKKLFFRLQSGD
pt040308_POPTR_ VKEEDFD----ESFKDCDISSVSGSEDEAE-KVSILRTDAQRGFVESVKQKLFIRLKTGE
:****.* **.:* *:**:******** : . :: ***:*: *:***:**::*:
AT1G01930.1 KVSIWKCLIMDDAESVSFENDRGVSVDCCGSLVENEVTERLRNLIRENKDDRQMRVVLLA
pt040308_POPTR_ RVSIWKSLVLNDSESVCFENDNVLG----GCLRESEVIERLKFLIHEERNGTRLRIVLLA
:*****.*:::*:***.****. :. *.* *.** ***: **:*:::. ::*:****
AT1G01930.1 SGGHFAGTVFNGKSVVAHKTFHRYVVRAKAGKKQSTKDASGRSIHSAGASLRRYNELALK
pt040308_POPTR_ SGGHFVGCVFDGNSPVLHKTFHRYVVRAKAGKKQSSKDGTGRAAHSAGASLRRYNELALK
*****.* **:*:* * ******************:**.:**: ****************
AT1G01930.1 KDIQELLASWKPYFDGAACVFVHAPSSSRQLLFNGGKPYFSSQNCAVRNVPFTIRRPTFK
pt040308_POPTR_ KDIQELLDVWKPYFDASSCIYLYAPSSNRQLLFDGNKAYFSHQH-HVRNIPLSIRRPTFK
******* ******.::*::::****.*****:*.*.*** *: ***:*::*******
AT1G01930.1 ESQRIYNQLTQIAHVTEEIFVNRPE-----VTKANTVVQT----HNEDSGKTSRKEEPDE
pt040308_POPTR_ EARRIYNQLAQVTYEVDEK-ESLPDTIDDLVSTTSTITNSCPGPSKEDLNDSINSAESTE
*::******:*::: .:* . *: *:.:.*:.:: :** ..: .. *. *
AT1G01930.1 TSSSNIILEEPN--RIEEDIEDGVTGTSTALHEAAKSGDCERVMEFLEEGMDPCAKDERG
pt040308_POPTR_ PSS---IKKKSDDLHVSSGSESEVAGMTTPLHEATQSGDVHQVLKLLEQGLDPCIKDERG
.** * ::.: ::... *. *:* :*.****::*** .:*:::**:*:*** *****
AT1G01930.1 RTPYMLANEKEVRNTFRRFMALNLEKWNWHDAKVPSPLTKEMEESQAAKQAEKDAKQKAR
pt040308_POPTR_ RTPYMLANDKEVRNTFRRFMALNIDRWDWHAANVPSALTKEMEESQAAKQTEKEEKRKAR
********:**************:::*:** *:***.*************:**: *:***
AT1G01930.1 TKELKKLRKAREKKAQAEAAQAEKEKPISKVEEVRRAMAAQREKRAAAAERRM---ASLN
pt040308_POPTR_ AKELKKLRKAREKKAQAEAPSSQNAAAV--LQELKRAEAIEREKRAAAAERRMAAVAAIN
:******************..::: .: ::*::** * :************ *::*
AT1G01930.1 IQSSSSTS----------------------------------------------------
pt040308_POPTR_ AQSSSTSTVPAMAQPKSGLTSDITCSCCNVSLAGKVPFHRYNYKYCSTSCMHVHREILED
****:::
AT1G01930.1 -
pt040308_POPTR_ E
BoxShade v3.31 C (beta, 970507) Output
AT1G01930.1 |
M |
A |
T |
T |
G |
A |
A |
A |
T |
T |
E |
I |
G |
N |
P |
E |
Y |
K |
Q |
P |
R |
S |
I |
F |
D |
L |
T |
A |
D |
F |
F |
D |
S |
C |
R |
L |
S |
N |
P |
S |
E |
T |
Q |
S |
A |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
P |
P |
K |
T |
pt040308_POPTR_ |
M |
A |
T |
A |
P |
L |
L |
P |
T |
T |
N |
S |
T |
S |
Q |
E |
- |
K |
R |
H |
R |
S |
I |
F |
D |
V |
P |
T |
D |
F |
F |
D |
A |
C |
R |
L |
L |
S |
P |
S |
S |
S |
P |
S |
P |
A |
S |
T |
S |
V |
A |
P |
E |
I |
P |
S |
P |
I |
E |
T |
|
AT1G01930.1 |
F |
D |
P |
E |
E |
A |
E |
E |
D |
K |
S |
S |
K |
D |
G |
- |
- |
V |
I |
L |
D |
R |
W |
T |
C |
N |
T |
C |
K |
I |
E |
F |
L |
S |
L |
Q |
D |
Q |
R |
Y |
H |
F |
K |
S |
D |
I |
H |
R |
L |
N |
I |
K |
L |
S |
V |
A |
G |
K |
A |
I |
pt040308_POPTR_ |
L |
D |
- |
- |
- |
- |
E |
V |
D |
T |
I |
S |
K |
N |
G |
V |
E |
V |
T |
I |
P |
R |
W |
T |
C |
N |
T |
C |
K |
A |
E |
F |
D |
S |
L |
Q |
D |
Q |
R |
F |
H |
F |
K |
S |
D |
I |
H |
R |
I |
N |
V |
K |
L |
S |
I |
A |
G |
K |
D |
I |
|
AT1G01930.1 |
L |
K |
E |
E |
D |
V |
D |
E |
L |
T |
S |
E |
S |
V |
Q |
D |
Y |
D |
V |
S |
S |
I |
S |
G |
S |
E |
D |
E |
A |
E |
T |
R |
P |
P |
S |
F |
H |
F |
D |
A |
Q |
K |
G |
I |
- |
- |
- |
D |
K |
K |
K |
L |
F |
F |
R |
L |
Q |
S |
G |
D |
pt040308_POPTR_ |
V |
K |
E |
E |
D |
F |
D |
- |
- |
- |
- |
E |
S |
F |
K |
D |
C |
D |
I |
S |
S |
V |
S |
G |
S |
E |
D |
E |
A |
E |
- |
K |
V |
S |
I |
L |
R |
T |
D |
A |
Q |
R |
G |
F |
V |
E |
S |
V |
K |
Q |
K |
L |
F |
I |
R |
L |
K |
T |
G |
E |
|
AT1G01930.1 |
K |
V |
S |
I |
W |
K |
C |
L |
I |
M |
D |
D |
A |
E |
S |
V |
S |
F |
E |
N |
D |
R |
G |
V |
S |
V |
D |
C |
C |
G |
S |
L |
V |
E |
N |
E |
V |
T |
E |
R |
L |
R |
N |
L |
I |
R |
E |
N |
K |
D |
D |
R |
Q |
M |
R |
V |
V |
L |
L |
A |
pt040308_POPTR_ |
R |
V |
S |
I |
W |
K |
S |
L |
V |
L |
N |
D |
S |
E |
S |
V |
C |
F |
E |
N |
D |
N |
V |
L |
G |
- |
- |
- |
- |
G |
C |
L |
R |
E |
S |
E |
V |
I |
E |
R |
L |
K |
F |
L |
I |
H |
E |
E |
R |
N |
G |
T |
R |
L |
R |
I |
V |
L |
L |
A |
|
AT1G01930.1 |
S |
G |
G |
H |
F |
A |
G |
T |
V |
F |
N |
G |
K |
S |
V |
V |
A |
H |
K |
T |
F |
H |
R |
Y |
V |
V |
R |
A |
K |
A |
G |
K |
K |
Q |
S |
T |
K |
D |
A |
S |
G |
R |
S |
I |
H |
S |
A |
G |
A |
S |
L |
R |
R |
Y |
N |
E |
L |
A |
L |
K |
pt040308_POPTR_ |
S |
G |
G |
H |
F |
V |
G |
C |
V |
F |
D |
G |
N |
S |
P |
V |
L |
H |
K |
T |
F |
H |
R |
Y |
V |
V |
R |
A |
K |
A |
G |
K |
K |
Q |
S |
S |
K |
D |
G |
T |
G |
R |
A |
A |
H |
S |
A |
G |
A |
S |
L |
R |
R |
Y |
N |
E |
L |
A |
L |
K |
|
AT1G01930.1 |
K |
D |
I |
Q |
E |
L |
L |
A |
S |
W |
K |
P |
Y |
F |
D |
G |
A |
A |
C |
V |
F |
V |
H |
A |
P |
S |
S |
S |
R |
Q |
L |
L |
F |
N |
G |
G |
K |
P |
Y |
F |
S |
S |
Q |
N |
C |
A |
V |
R |
N |
V |
P |
F |
T |
I |
R |
R |
P |
T |
F |
K |
pt040308_POPTR_ |
K |
D |
I |
Q |
E |
L |
L |
D |
V |
W |
K |
P |
Y |
F |
D |
A |
S |
S |
C |
I |
Y |
L |
Y |
A |
P |
S |
S |
N |
R |
Q |
L |
L |
F |
D |
G |
N |
K |
A |
Y |
F |
S |
H |
Q |
H |
- |
H |
V |
R |
N |
I |
P |
L |
S |
I |
R |
R |
P |
T |
F |
K |
|
AT1G01930.1 |
E |
S |
Q |
R |
I |
Y |
N |
Q |
L |
T |
Q |
I |
A |
H |
V |
T |
E |
E |
I |
F |
V |
N |
R |
P |
E |
- |
- |
- |
- |
- |
V |
T |
K |
A |
N |
T |
V |
V |
Q |
T |
- |
- |
- |
- |
H |
N |
E |
D |
S |
G |
K |
T |
S |
R |
K |
E |
E |
P |
D |
E |
pt040308_POPTR_ |
E |
A |
R |
R |
I |
Y |
N |
Q |
L |
A |
Q |
V |
T |
Y |
E |
V |
D |
E |
K |
- |
E |
S |
L |
P |
D |
T |
I |
D |
D |
L |
V |
S |
T |
T |
S |
T |
I |
T |
N |
S |
C |
P |
G |
P |
S |
K |
E |
D |
L |
N |
D |
S |
I |
N |
S |
A |
E |
S |
T |
E |
|
AT1G01930.1 |
T |
S |
S |
S |
N |
I |
I |
L |
E |
E |
P |
N |
- |
- |
R |
I |
E |
E |
D |
I |
E |
D |
G |
V |
T |
G |
T |
S |
T |
A |
L |
H |
E |
A |
A |
K |
S |
G |
D |
C |
E |
R |
V |
M |
E |
F |
L |
E |
E |
G |
M |
D |
P |
C |
A |
K |
D |
E |
R |
G |
pt040308_POPTR_ |
P |
S |
S |
- |
- |
- |
I |
K |
K |
K |
S |
D |
D |
L |
H |
V |
S |
S |
G |
S |
E |
S |
E |
V |
A |
G |
M |
T |
T |
P |
L |
H |
E |
A |
T |
Q |
S |
G |
D |
V |
H |
Q |
V |
L |
K |
L |
L |
E |
Q |
G |
L |
D |
P |
C |
I |
K |
D |
E |
R |
G |
|
AT1G01930.1 |
R |
T |
P |
Y |
M |
L |
A |
N |
E |
K |
E |
V |
R |
N |
T |
F |
R |
R |
F |
M |
A |
L |
N |
L |
E |
K |
W |
N |
W |
H |
D |
A |
K |
V |
P |
S |
P |
L |
T |
K |
E |
M |
E |
E |
S |
Q |
A |
A |
K |
Q |
A |
E |
K |
D |
A |
K |
Q |
K |
A |
R |
pt040308_POPTR_ |
R |
T |
P |
Y |
M |
L |
A |
N |
D |
K |
E |
V |
R |
N |
T |
F |
R |
R |
F |
M |
A |
L |
N |
I |
D |
R |
W |
D |
W |
H |
A |
A |
N |
V |
P |
S |
A |
L |
T |
K |
E |
M |
E |
E |
S |
Q |
A |
A |
K |
Q |
T |
E |
K |
E |
E |
K |
R |
K |
A |
R |
|
AT1G01930.1 |
T |
K |
E |
L |
K |
K |
L |
R |
K |
A |
R |
E |
K |
K |
A |
Q |
A |
E |
A |
A |
Q |
A |
E |
K |
E |
K |
P |
I |
S |
K |
V |
E |
E |
V |
R |
R |
A |
M |
A |
A |
Q |
R |
E |
K |
R |
A |
A |
A |
A |
E |
R |
R |
M |
- |
- |
- |
A |
S |
L |
N |
pt040308_POPTR_ |
A |
K |
E |
L |
K |
K |
L |
R |
K |
A |
R |
E |
K |
K |
A |
Q |
A |
E |
A |
P |
S |
S |
Q |
N |
A |
A |
A |
V |
- |
- |
L |
Q |
E |
L |
K |
R |
A |
E |
A |
I |
E |
R |
E |
K |
R |
A |
A |
A |
A |
E |
R |
R |
M |
A |
A |
V |
A |
A |
I |
N |
|
AT1G01930.1 |
I |
Q |
S |
S |
S |
S |
T |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt040308_POPTR_ |
A |
Q |
S |
S |
S |
T |
S |
T |
V |
P |
A |
M |
A |
Q |
P |
K |
S |
G |
L |
T |
S |
D |
I |
T |
C |
S |
C |
C |
N |
V |
S |
L |
A |
G |
K |
V |
P |
F |
H |
R |
Y |
N |
Y |
K |
Y |
C |
S |
T |
S |
C |
M |
H |
V |
H |
R |
E |
I |
L |
E |
D |
|
AT1G01930.1 |
- |
pt040308_POPTR_ |
E |
|
|