fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G02040.1 PLDQPSLDLNLACQEY at 276/324 in AT1G02040.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001365 SSEPLDLKLDLNLPAP in 325/371 AT1G02040.1 1st_1st 0.215073529 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G02040.1     MHVTRNVGKSQKLHHVSLKQVLSYLEPHEQEDTKPV--------TSTKNKGFLLFNSHQN
gm001365_Glyma0 ------------MHTLFLSLSIS----HKNTLQGPLLVPLAGGATTTK-----------S
                            :* : *.  :*    *::    *:        *:**           .

AT1G02040.1     TLNTHM--HGAMNSPCIDFVMFSRGQHDEDNMSRR----------PPWKRERSMSTQHHH
gm001365_Glyma0 ALGGHMRAHGIGD---------ESGHMDDDDQASDWEDRLGGNVPPSNKRMYALRTNPNR
                :*. **  **  :         . *: *:*: :            *. **  :: *: ::

AT1G02040.1     L---------------------------------------NLSPNEDEELANCLVLLSN-
gm001365_Glyma0 LKSCRVCENCGKEFLSWKSFLEHGKCTSEDAESLVGSFNYNCPSSEEEDLANCLMMLSNA
                *                                       * ...*:*:*****::*** 

AT1G02040.1     ---------------------------------SGDAHGGDQH----KQHGHGKGKTVKK
gm001365_Glyma0 IVDPLIAEPEESCASASKEEEQRRNPMNFIAPLSYKINNNNQHLVDNKAKGVAKG-----
                                                 * . :..:**    * :* .**     

AT1G02040.1     QKTAQVFQCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEEEEEEYKEDDDDNDEDE
gm001365_Glyma0 -----LFECKACKKVFNSHQALGGHRASHKKVKGCFAA-----------KLDNLDDNIME
                     :*:********.********************:           * *: *::  *

AT1G02040.1     DEEEDEEDK--STAHIARKRSNAHECTICHRVFSSGQALGGHKRCHWLTP-----SNYLR
gm001365_Glyma0 DDVITHEDSNPSLASSSKRKPKVHECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLTR
                *:   .**.  * *  ::::.:.***:**** ***************:*.     *.  *

AT1G02040.1     MTSLHDHHHSVGR----PQPLDQPSLDLNLACQEYSVDPTAMSVGMIERDGGGNNHNATS
gm001365_Glyma0 FQPFQEHLDQIPKFDTSSEPLDL-KLDLNLP---------APSNDLARR----NDMNTGG
                : .:::* ..: :    .:***  .*****.         * * .: .*    *: *: .

AT1G02040.1     SS--WLKLASGDWS--------
gm001365_Glyma0 SSLPWLQVGIGSTATDVETDNC
                **  **::. *. :
BoxShade v3.31 C (beta, 970507) Output
AT1G02040.1     M H V T R N V G K S Q K L H H V S L K Q V L S Y L E P H E Q E D T K P V - - - - - - - - T S T K N K G F L L F N S H Q N
gm001365_Glyma0    - - - - - - - - - - - - M H T L F L S L S I S - - - - H K N T L Q G P L L V P L A G G A T T T K - - - - - - - - - - - S
 
AT1G02040.1     T L N T H M - - H G A M N S P C I D F V M F S R G Q H D E D N M S R R - - - - - - - - - - P P W K R E R S M S T Q H H H
gm001365_Glyma0    A L G G H M R A H G I G D - - - - - - - - - E S G H M D D D D Q A S D W E D R L G G N V P P S N K R M Y A L R T N P N R
 
AT1G02040.1     L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N L S P N E D E E L A N C L V L L S N -
gm001365_Glyma0    L K S C R V C E N C G K E F L S W K S F L E H G K C T S E D A E S L V G S F N Y N C P S S E E E D L A N C L M M L S N A
 
AT1G02040.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S G D A H G G D Q H - - - - K Q H G H G K G K T V K K
gm001365_Glyma0    I V D P L I A E P E E S C A S A S K E E E Q R R N P M N F I A P L S Y K I N N N N Q H L V D N K A K G V A K G - - - - -
 
AT1G02040.1     Q K T A Q V F Q C K A C K K V F T S H Q A L G G H R A S H K K V K G C F A S Q D K E E E E E E E Y K E D D D D N D E D E
gm001365_Glyma0    - - - - - L F E C K A C K K V F N S H Q A L G G H R A S H K K V K G C F A A - - - - - - - - - - - K L D N L D D N I M E
 
AT1G02040.1     D E E E D E E D K - - S T A H I A R K R S N A H E C T I C H R V F S S G Q A L G G H K R C H W L T P - - - - - S N Y L R
gm001365_Glyma0    D D V I T H E D S N P S L A S S S K R K P K V H E C S I C H R S F S S G Q A L G G H K R C H W I T S N A P D T S T L T R
 
AT1G02040.1     M T S L H D H H H S V G R - - - - P Q P L D Q P S L D L N L A C Q E Y S V D P T A M S V G M I E R D G G G N N H N A T S
gm001365_Glyma0    F Q P F Q E H L D Q I P K F D T S S E P L D L - K L D L N L P - - - - - - - - - A P S N D L A R R - - - - N D M N T G G
 
AT1G02040.1     S S - - W L K L A S G D W S - - - - - - - -
gm001365_Glyma0    S S L P W L Q V G I G S T A T D V E T D N C
 
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