fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G02065.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006791 not found in 336aa AT1G02065.1 1st_1st 0.447540983 Ia
Pt018004 not found in 328aa AT1G02065.1 1st_1st 0.427868852 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G02065.1     MLDYEWDNPSSIVLSG--DERNPDSDPTRSS---FSFFDPISHYNNDH--------RH--
gm006791_Glyma0 MLDYEWGNPSTIMLSGNEDSSAAGSDQTHRQ-----IFD---HYASHT-----LIPDH--
pt018004_POPTR_ MLEYEWGNPSTIMLSGGDDQQAGSNHEVQDQNRQASIFD---HYTTQSFNDNNLIPQHTS
                **:***.***:*:***  *.   ... .: .     :**   ** ..          *  

AT1G02065.1     ---ITISPPLLSSFS---------------NQQQQHHLTLYGQTNSNNQFLHHHHHHHSL
gm006791_Glyma0 ----FLHAPTHSTATTAAAATVDFTHHHHFTPQPHHH-------NQNHM---NHHHHHAF
pt018004_POPTR_ PTLMFQNHPTTTNAT--------------------HH-------NIN-----------SF
                        *  :. :                    **       * *           ::

AT1G02065.1     Y------GSTTTTTPYGASDPIYHPHSSAPPASLFSYD------QTGPG--SGSGSSYNF
gm006791_Glyma0 FDPRAFHGASNTSYP-----PPH---------SMLSLDPLPHVNAVGPGHGPGSGPGGLL
pt018004_POPTR_ FDPRAYAGAGASSFP-----TTHHP-------SLLSLDPIPTVTSVATA-------TSYF
                :      *:  :: *     . :         *::* *       ....          :

AT1G02065.1     LIPKTE------VDFTSNRIGLNLGGRTYFSAADDDFVSRLYRRSRPGESGMANSLSTPR
gm006791_Glyma0 LVPKSEDVGRP-MDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTASSNSPR
pt018004_POPTR_ LIPKSEEIPRSNSDLITSRIGLNLGGRTYFSSAEDDFVNRLYRRSRPLDPGS--SSNAPR
                *:**:*       *:  .*************:::****.******** :.*   * .:**

AT1G02065.1     CQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRS
gm006791_Glyma0 CQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRS
pt018004_POPTR_ CQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRS
                **********::*****************:**:****:**********************

AT1G02065.1     CRKRLADHNRRRRKCHQSASATQDT-------GTGKTTPKSPNDSGVKASSSPS-SNAPP
gm006791_Glyma0 CRKRLADHNRRRRKTQQPTQEIQKSQ------SSLENVARSPPDSGAQSSSSVTVAVSPP
pt018004_POPTR_ CRKRLADHNRRRRKSHQINQENQKSHLENATISSSEILTRSPPDSGAHPTSSVTVAMSPP
                ************** :*  .  *.:       .: :  .:** ***.:.:** : : :**

AT1G02065.1     TISLECFRQRQFQTTASSSTSASSSSNSMFFSSG
gm006791_Glyma0 ----DYFRQRPYQSTNPSSTTSS----SLFFSSG
pt018004_POPTR_ RMSLDCFKQRSYQATASSSTSSS----SLFFSSG
                    : *:** :*:* .***::*    *:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G02065.1     M L D Y E W D N P S S I V L S G - - D E R N P D S D P T R S S - - - F S F F D P I S H Y N N D H - - - - - - - - R H - -
gm006791_Glyma0    M L D Y E W G N P S T I M L S G N E D S S A A G S D Q T H R Q - - - - - I F D - - - H Y A S H T - - - - - L I P D H - -
pt018004_POPTR_    M L E Y E W G N P S T I M L S G G D D Q Q A G S N H E V Q D Q N R Q A S I F D - - - H Y T T Q S F N D N N L I P Q H T S
 
AT1G02065.1     - - - I T I S P P L L S S F S - - - - - - - - - - - - - - - N Q Q Q Q H H L T L Y G Q T N S N N Q F L H H H H H H H S L
gm006791_Glyma0    - - - - F L H A P T H S T A T T A A A A T V D F T H H H H F T P Q P H H H - - - - - - - N Q N H M - - - N H H H H H A F
pt018004_POPTR_    P T L M F Q N H P T T T N A T - - - - - - - - - - - - - - - - - - - - H H - - - - - - - N I N - - - - - - - - - - - S F
 
AT1G02065.1     Y - - - - - - G S T T T T T P Y G A S D P I Y H P H S S A P P A S L F S Y D - - - - - - Q T G P G - - S G S G S S Y N F
gm006791_Glyma0    F D P R A F H G A S N T S Y P - - - - - P P H - - - - - - - - - S M L S L D P L P H V N A V G P G H G P G S G P G G L L
pt018004_POPTR_    F D P R A Y A G A G A S S F P - - - - - T T H H P - - - - - - - S L L S L D P I P T V T S V A T A - - - - - - - T S Y F
 
AT1G02065.1     L I P K T E - - - - - - V D F T S N R I G L N L G G R T Y F S A A D D D F V S R L Y R R S R P G E S G M A N S L S T P R
gm006791_Glyma0    L V P K S E D V G R P - M D F V G S R I G L N L G G R T Y F S S S E D D F V S R L Y R R S R P V E P G S T A S S N S P R
pt018004_POPTR_    L I P K S E E I P R S N S D L I T S R I G L N L G G R T Y F S S A E D D F V N R L Y R R S R P L D P G S - - S S N A P R
 
AT1G02065.1     C Q A E G C N A D L S H A K H Y H R R H K V C E F H S K A S T V V A A G L S Q R F C Q Q C S R F H L L S E F D N G K R S
gm006791_Glyma0    C Q A E G C N A D L S Q A K H Y H R R H K V C E F H S K A A T V I A A G L T Q R F C Q Q C S R F H L L S E F D N G K R S
pt018004_POPTR_    C Q A E G C N A D L T H A K H Y H R R H K V C E F H S K A S T V I A A G L T Q R F C Q Q C S R F H L L S E F D N G K R S
 
AT1G02065.1     C R K R L A D H N R R R R K C H Q S A S A T Q D T - - - - - - - G T G K T T P K S P N D S G V K A S S S P S - S N A P P
gm006791_Glyma0    C R K R L A D H N R R R R K T Q Q P T Q E I Q K S Q - - - - - - S S L E N V A R S P P D S G A Q S S S S V T V A V S P P
pt018004_POPTR_    C R K R L A D H N R R R R K S H Q I N Q E N Q K S H L E N A T I S S S E I L T R S P P D S G A H P T S S V T V A M S P P
 
AT1G02065.1     T I S L E C F R Q R Q F Q T T A S S S T S A S S S S N S M F F S S G
gm006791_Glyma0    - - - - D Y F R Q R P Y Q S T N P S S T T S S - - - - S L F F S S G
pt018004_POPTR_    R M S L D C F K Q R S Y Q A T A S S S T S S S - - - - S L F F S S G
 
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